Conservation of cofitness between CSW01_14090 and CSW01_06415 in Vibrio cholerae E7946 ATCC 55056

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14090 NAD(P)-dependent oxidoreductase 1.0 CSW01_06415 MBL fold metallo-hydrolase 0.64 7
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS31100 oxidoreductase 0.55 RR42_RS19750 MBL fold metallo-hydrolase low > 128
Rhodopseudomonas palustris CGA009 0.54 TX73_010170 NAD(P)-dependent oxidoreductase 0.50 TX73_002945 MBL fold metallo-hydrolase low > 86
Shewanella loihica PV-4 0.54 Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.60 Shew_2269 beta-lactamase domain-containing protein (RefSeq) low > 60
Rhizobium sp. OAE497 0.54 ABIE40_RS10680 NAD(P)-dependent oxidoreductase 0.50 ABIE40_RS12965 MBL fold metallo-hydrolase low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF2719 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.60 GFF1871 Hypothetical metal-binding enzyme, YcbL homolog
Bosea sp. OAE506 0.53 ABIE41_RS21160 NAD(P)-dependent oxidoreductase 0.46 ABIE41_RS00100 MBL fold metallo-hydrolase
Sinorhizobium meliloti 1021 0.52 SMc00133 oxidoreductase 0.48 SMc01587 hypothetical protein low > 103
Marinobacter adhaerens HP15 0.51 HP15_1515 6-phosphogluconate dehydrogenase domain protein 0.62 HP15_1191 metallo-beta-lactamase family protein low > 73
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4470 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.48 Ac3H11_3348 Hypothetical metal-binding enzyme, YcbL homolog
Shewanella sp. ANA-3 0.51 Shewana3_2554 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.61 Shewana3_1493 beta-lactamase domain-containing protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.50 Sama_1975 2-hydroxy-3-oxopropionate reductase (RefSeq) 0.55 Sama_2142 metallo-beta-lactamase family protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.50 MIT1002_01976 2-hydroxy-3-oxopropionate reductase 0.54 MIT1002_03450 Beta-lactamase hydrolase-like protein low > 70
Pseudomonas sp. S08-1 0.50 OH686_02015 2-hydroxy-3-oxopropionate reductase 0.31 OH686_06295 MBL-fold metallo-hydrolase superfamily low > 80
Caulobacter crescentus NA1000 0.50 CCNA_01645 3-hydroxyisobutyrate dehydrogenase 0.53 CCNA_01241 Zn-dependent hydrolase, glyoxalase II family low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01645 3-hydroxyisobutyrate dehydrogenase 0.53 CCNA_01241 Zn-dependent hydrolase, glyoxalase II family low > 67
Shewanella oneidensis MR-1 0.50 SO2771 garR 2-hydroxy-3-oxopropionate reductase (NCBI ptt file) 0.61 SO3054 metallo-beta-lactamase family protein (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.49 MPMX49_02338 2-hydroxy-3-oxopropionate reductase 0.33 MPMX49_03689 Hydroxyacylglutathione hydrolase GloC low > 75
Pseudomonas aeruginosa PA14 0.49 IKLFDK_07540 oxidoreductase 0.33 IKLFDK_03655 MBL fold metallo-hydrolase low > 98
Sphingobium sp. HT1-2 0.49 GFF1491 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.49 GFF667 Hypothetical metal-binding enzyme, YcbL homolog low > 95
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS19525 NAD(P)-dependent oxidoreductase 0.33 DY961_RS08335 MBL fold metallo-hydrolase low > 100
Pseudomonas aeruginosa PUPa3 0.48 DQ20_RS53640 NAD(P)-dependent oxidoreductase 0.33 DQ20_RS44490 MBL fold metallo-hydrolase low > 101
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS06070 NAD(P)-dependent oxidoreductase 0.53 A4249_RS06505 MBL fold metallo-hydrolase low > 48
Escherichia coli ECRC102 0.31 NIAGMN_16130 garR 2-hydroxy-3-oxopropionate reductase 0.59 NIAGMN_03110 gloC hydroxyacylglutathione hydrolase GloC low > 80
Escherichia coli BW25113 0.31 b3125 garR tartronate semialdehyde reductase (RefSeq) 0.59 b0927 ycbL predicted metal-binding enzyme (NCBI) low > 76
Escherichia coli ECOR38 0.31 HEPCGN_17205 garR 2-hydroxy-3-oxopropionate reductase 0.60 HEPCGN_23135 gloC hydroxyacylglutathione hydrolase GloC low > 88
Dechlorosoma suillum PS 0.31 Dsui_3436 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase 0.57 Dsui_3107 Zn-dependent hydrolase, glyoxylase low > 51
Escherichia coli ECRC98 0.31 JDDGAC_22000 garR 2-hydroxy-3-oxopropionate reductase 0.59 JDDGAC_09000 gloC hydroxyacylglutathione hydrolase GloC low > 87
Escherichia coli ECRC62 0.31 BNILDI_01380 garR 2-hydroxy-3-oxopropionate reductase 0.59 BNILDI_20205 gloC hydroxyacylglutathione hydrolase GloC low > 75
Escherichia coli ECRC101 0.31 MCAODC_08880 garR 2-hydroxy-3-oxopropionate reductase 0.59 MCAODC_24780 gloC hydroxyacylglutathione hydrolase GloC low > 87
Escherichia coli ECRC99 0.31 KEDOAH_09780 garR 2-hydroxy-3-oxopropionate reductase 0.59 KEDOAH_22345 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00578 2-hydroxy-3-oxopropionate reductase 0.59 OHPLBJKB_02740 Hydroxyacylglutathione hydrolase GloC low > 74
Escherichia coli Nissle 1917 0.31 ECOLIN_RS17960 2-hydroxy-3-oxopropionate reductase 0.59 ECOLIN_RS04905 hydroxyacylglutathione hydrolase GloC low > 55
Escherichia coli BL21 0.31 ECD_02990 tartronate semialdehyde reductase 0.59 ECD_00931 putative metal-binding enzyme low > 61
Escherichia coli ECOR27 0.31 NOLOHH_10150 garR 2-hydroxy-3-oxopropionate reductase 0.59 NOLOHH_21950 gloC hydroxyacylglutathione hydrolase GloC low > 76
Escherichia coli ECRC100 0.31 OKFHMN_18370 garR 2-hydroxy-3-oxopropionate reductase 0.59 OKFHMN_05390 gloC hydroxyacylglutathione hydrolase GloC low > 79
Rahnella sp. WP5 0.30 EX31_RS07980 2-hydroxy-3-oxopropionate reductase 0.54 EX31_RS18150 MBL fold metallo-hydrolase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF1536 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.59 GFF3684 Hypothetical metal-binding enzyme, YcbL homolog low > 78
Klebsiella pneumoniae MKP103 0.30 KDGMDA_05690 2-hydroxy-3-oxopropionate reductase 0.61 KDGMDA_18065 Hydroxyacylglutathione hydrolase GloC low > 95
Escherichia fergusonii Becca 0.29 EFB2_00694 2-hydroxy-3-oxopropionate reductase 0.59 EFB2_03137 Hydroxyacylglutathione hydrolase GloC low > 86
Klebsiella michiganensis M5al 0.29 BWI76_RS24825 2-hydroxy-3-oxopropionate reductase 0.60 BWI76_RS09865 MBL fold hydrolase low > 92
Dickeya dadantii 3937 0.29 DDA3937_RS17035 2-hydroxy-3-oxopropionate reductase 0.58 DDA3937_RS12920 MBL fold metallo-hydrolase low > 74
Dickeya dianthicola ME23 0.28 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase 0.57 DZA65_RS13455 MBL fold metallo-hydrolase low > 75
Pantoea sp. MT58 0.28 IAI47_04100 2-hydroxy-3-oxopropionate reductase 0.56 IAI47_12770 MBL fold metallo-hydrolase low > 76
Enterobacter sp. TBS_079 0.28 MPMX20_04033 2-hydroxy-3-oxopropionate reductase 0.59 MPMX20_01585 Hydroxyacylglutathione hydrolase GloC low > 85
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3182 2-hydroxy-3-oxopropionate reductase 0.59 EX28DRAFT_2009 Zn-dependent hydrolases, including glyoxylases low > 76
Erwinia tracheiphila HP pepo 2.2 0.28 IJEDHG_17355 garR 2-hydroxy-3-oxopropionate reductase 0.56 IJEDHG_20400 Hydroxyacylglutathione hydrolase GloC low > 61
Erwinia tracheiphila SCR3 0.28 LU632_RS06330 garR 2-hydroxy-3-oxopropionate reductase 0.56 LU632_RS09895 MBL fold metallo-hydrolase low > 73
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS16870 2-hydroxy-3-oxopropionate reductase 0.55 PagCFBP13505_RS04560 MBL fold metallo-hydrolase low > 74
Dickeya dianthicola 67-19 0.28 HGI48_RS17090 2-hydroxy-3-oxopropionate reductase 0.58 HGI48_RS12995 MBL fold metallo-hydrolase low > 71
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS04620 NAD(P)-dependent oxidoreductase 0.53 RALBFv3_RS08505 MBL fold metallo-hydrolase
Ralstonia solanacearum UW163 0.28 UW163_RS09050 NAD(P)-dependent oxidoreductase 0.53 UW163_RS05105 MBL fold metallo-hydrolase
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS00230 NAD(P)-dependent oxidoreductase 0.53 ABZR87_RS03825 MBL fold metallo-hydrolase low > 80
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS32505 2-hydroxy-3-oxopropionate reductase 0.56 QEN71_RS00645 MBL fold metallo-hydrolase low > 153
Ralstonia solanacearum PSI07 0.28 RPSI07_RS12755 NAD(P)-dependent oxidoreductase 0.54 RPSI07_RS08720 MBL fold metallo-hydrolase
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_05314 2-hydroxy-3-oxopropionate reductase 0.57 H281DRAFT_02154 Glyoxylase, beta-lactamase superfamily II low > 103
Paraburkholderia graminis OAS925 0.27 ABIE53_006511 2-hydroxy-3-oxopropionate reductase 0.57 ABIE53_000468 hydroxyacylglutathione hydrolase
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS24130 tartronate semialdehyde reductase 0.55 BPHYT_RS01930 hypothetical protein
Xanthobacter sp. DMC5 0.27 GFF1957 2-hydroxy-3-oxopropionate reductase 0.48 GFF3817 Hydroxyacylglutathione hydrolase GloC
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_2927 garR tartronate semialdehyde reductase (RefSeq) 0.26 DvMF_2853 beta-lactamase domain protein (RefSeq) low > 51
Azospirillum brasilense Sp245 0.27 AZOBR_RS07955 tartronate semialdehyde reductase 0.55 AZOBR_RS19250 hypothetical protein
Ralstonia solanacearum GMI1000 0.26 RS_RS16450 2-hydroxy-3-oxopropionate reductase 0.54 RS_RS16370 MBL fold metallo-hydrolase
Pseudomonas orientalis W4I3 0.26 QF045_RS11500 2-hydroxy-3-oxopropionate reductase 0.33 QF045_RS07550 MBL fold metallo-hydrolase 0.68 9
Pectobacterium carotovorum WPP14 0.26 HER17_RS04095 2-hydroxy-3-oxopropionate reductase 0.59 HER17_RS12035 MBL fold metallo-hydrolase low > 75
Pseudomonas simiae WCS417 0.26 PS417_08800 tartronate semialdehyde reductase 0.32 PS417_04560 beta-lactamase
Pseudomonas stutzeri RCH2 0.25 Psest_1179 2-hydroxy-3-oxopropionate reductase 0.33 Psest_3219 Zn-dependent hydrolases, including glyoxylases low > 67
Pseudomonas fluorescens SBW25 0.25 PFLU_RS08860 2-hydroxy-3-oxopropionate reductase 0.32 PFLU_RS04625 MBL fold metallo-hydrolase
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS08860 2-hydroxy-3-oxopropionate reductase 0.32 PFLU_RS04625 MBL fold metallo-hydrolase low > 109
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_01891 2-hydroxy-3-oxopropionate reductase 0.33 GEMAOFIL_01115 Hydroxyacylglutathione hydrolase GloC low > 96
Pseudomonas sp. DMC3 0.25 GFF2501 2-hydroxy-3-oxopropionate reductase 0.33 GFF4448 Hydroxyacylglutathione hydrolase GloC low > 89
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_4297 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.34 PfGW456L13_1623 Hypothetical metal-binding enzyme, YcbL homolog low > 87
Agrobacterium fabrum C58 0.25 Atu2737 oxidoredutase 0.48 Atu2201 hydrolase low > 89
Pseudomonas sp. BP01 0.25 JOY50_RS00360 2-hydroxy-3-oxopropionate reductase 0.31 JOY50_RS19395 MBL fold metallo-hydrolase low > 84
Pseudomonas putida KT2440 0.25 PP_4299 tartronate semialdehyde reductase 0.31 PP_0772 Metallo-beta-lactamase family protein
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_01930 2-hydroxy-3-oxopropionate reductase 0.33 AO353_15160 MBL fold metallo-hydrolase low > 101
Azospirillum sp. SherDot2 0.23 MPMX19_05813 2-hydroxy-3-oxopropionate reductase 0.56 MPMX19_04818 Hydroxyacylglutathione hydrolase GloC low > 112
Pseudomonas sp. SVBP6 0.23 COO64_RS25875 2-hydroxy-3-oxopropionate reductase 0.33 COO64_RS03445 MBL fold metallo-hydrolase low > 93
Acinetobacter radioresistens SK82 0.23 MPMX26_01549 3-hydroxyisobutyrate dehydrogenase 0.47 MPMX26_00296 Hydroxyacylglutathione hydrolase GloC
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS01080 6-phosphogluconate dehydrogenase 0.28 CA265_RS19735 MBL fold hydrolase low > 88
Acinetobacter baumannii LAC-4 0.23 RR41_RS18340 3-hydroxyisobutyrate dehydrogenase 0.48 RR41_RS17080 MBL fold metallo-hydrolase low > 55
Magnetospirillum magneticum AMB-1 0.22 AMB_RS18155 3-hydroxyisobutyrate dehydrogenase 0.20 AMB_RS06135 MBL fold metallo-hydrolase low > 64
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3659 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.33 Pf1N1B4_2963 Hypothetical metal-binding enzyme, YcbL homolog
Mycobacterium tuberculosis H37Rv 0.18 Rv0751c Probable 3-hydroxyisobutyrate dehydrogenase MmsB (hibadh) 0.24 Rv2581c Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II) low > 58
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_3686 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.50 Ga0059261_2228 Zn-dependent hydrolases, including glyoxylases 0.41 11
Serratia liquefaciens MT49 0.17 IAI46_07605 NAD(P)-dependent oxidoreductase 0.58 IAI46_08745 MBL fold metallo-hydrolase low > 87
Rhodospirillum rubrum S1H 0.15 Rru_A1833 3-hydroxyisobutyrate dehydrogenase (NCBI) 0.55 Rru_A1522 Beta-lactamase-like (NCBI)
Erwinia amylovora T8 0.13 OLJFJH_17300 3-hydroxyisobutyrate dehydrogenase 0.57 OLJFJH_16050 Hydroxyacylglutathione hydrolase GloC 0.28 21

Not shown: 20 genomes with orthologs for CSW01_14090 only; 11 genomes with orthologs for CSW01_06415 only