Conservation of cofitness between CSW01_05775 and CSW01_03755 in Vibrio cholerae E7946 ATCC 55056

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit 1.0 CSW01_03755 recombination-associated protein RdgC 0.72 2
Enterobacter sp. TBS_079 0.88 MPMX20_03007 Imidazole glycerol phosphate synthase subunit HisF 0.56 MPMX20_00982 Recombination-associated protein RdgC low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C low > 76
Escherichia coli ECRC98 0.87 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC low > 87
Escherichia coli ECRC101 0.87 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC low > 87
Escherichia fergusonii Becca 0.87 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF 0.57 EFB2_03663 Recombination-associated protein RdgC low > 86
Escherichia coli BW25113 0.87 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) 0.57 b0393 rdgC recombination associated protein (NCBI) low > 76
Escherichia coli ECRC100 0.87 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC99 0.87 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC62 0.87 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC low > 75
Escherichia coli ECRC102 0.87 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC low > 80
Escherichia coli ECOR38 0.87 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC low > 88
Escherichia coli ECOR27 0.87 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC low > 76
Klebsiella michiganensis M5al 0.87 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit 0.57 BWI76_RS06205 recombination-associated protein RdgC low > 92
Escherichia coli Nissle 1917 0.87 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF 0.57 ECOLIN_RS02385 recombination-associated protein RdgC low > 55
Klebsiella pneumoniae MKP103 0.87 KDGMDA_26120 Imidazole glycerol phosphate synthase subunit HisF 0.58 KDGMDA_14285 recombination-associated protein RdgC low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC low > 74
Escherichia coli BL21 0.87 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.57 GFF4290 DNA recombination-dependent growth factor C low > 78
Pectobacterium carotovorum WPP14 0.85 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF 0.55 HER17_RS16060 recombination-associated protein RdgC low > 75
Serratia liquefaciens MT49 0.85 IAI46_08185 imidazole glycerol phosphate synthase subunit HisF 0.58 IAI46_04710 recombination-associated protein RdgC low > 87
Rahnella sp. WP5 0.85 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF 0.58 EX31_RS21990 recombination-associated protein RdgC low > 89
Dickeya dadantii 3937 0.85 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF 0.58 DDA3937_RS05405 recombination-associated protein RdgC low > 74
Pantoea sp. MT58 0.85 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF 0.58 IAI47_14910 recombination-associated protein RdgC low > 76
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13505_RS01185 imidazole glycerol phosphate synthase subunit HisF 0.57 PagCFBP13505_RS10255 recombination-associated protein RdgC low > 74
Dickeya dianthicola 67-19 0.84 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF 0.59 HGI48_RS05465 recombination-associated protein RdgC — —
Dickeya dianthicola ME23 0.84 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF 0.59 DZA65_RS05790 recombination-associated protein RdgC low > 75
Erwinia tracheiphila SCR3 0.84 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC low > 73
Erwinia amylovora T8 0.84 OLJFJH_12155 imidazole glycerol phosphate synthase subunit HisF 0.58 OLJFJH_18235 recombination-associated protein RdgC low > 58
Erwinia tracheiphila HP pepo 2.2 0.84 IJEDHG_19065 hisF imidazole glycerol phosphate synthase subunit HisF 0.57 IJEDHG_26160 rdgC recombination-associated protein RdgC low > 61
Alteromonas macleodii MIT1002 0.76 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF 0.37 MIT1002_00749 Recombination-associated protein RdgC low > 70
Shewanella amazonensis SB2B 0.75 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.49 Sama_1072 rdgC recombination associated protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.74 SO2068 hisF hisF protein (cyclase) (NCBI ptt file) 0.49 SO1556 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.49 Shewana3_2881 rdgC recombination associated protein (RefSeq) low > 73
Shewanella loihica PV-4 0.74 Shew_2203 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.48 Shew_2751 rdgC recombination associated protein (RefSeq) low > 60
Lysobacter sp. OAE881 0.66 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF 0.31 ABIE51_RS01300 recombination-associated protein RdgC — —
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.31 ABZR86_RS16505 recombination-associated protein RdgC — —
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF 0.30 LRK54_RS10690 recombination-associated protein RdgC — —
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C — —
Rhodanobacter sp000427505 FW510-R12 0.65 LRK53_RS08485 imidazole glycerol phosphate synthase subunit HisF 0.30 LRK53_RS03480 recombination-associated protein RdgC — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF 0.30 LRK55_RS10330 recombination-associated protein RdgC — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF 0.29 OKGIIK_13190 rdgC recombination-associated protein RdgC — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF 0.30 RALBFv3_RS12420 recombination-associated protein RdgC — —
Ralstonia solanacearum UW163 0.45 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF 0.30 UW163_RS01150 recombination-associated protein RdgC — —
Ralstonia solanacearum PSI07 0.45 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF 0.28 RPSI07_RS20910 recombination-associated protein RdgC — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF 0.30 ABZR87_RS18475 recombination-associated protein RdgC — —
Ralstonia solanacearum GMI1000 0.44 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF 0.29 RS_RS03100 recombination-associated protein RdgC — —
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS18885 imidazole glycerol phosphate synthase 0.28 RR42_RS17820 recombinase RdgC — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF 0.29 H281DRAFT_00319 recombination associated protein RdgC — —
Pseudomonas sp. S08-1 0.43 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC low > 80
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF 0.29 QEN71_RS20685 recombination-associated protein RdgC low > 153
Pseudomonas aeruginosa PA14 0.43 IKLFDK_27805 Imidazole glycerol phosphate synthase subunit HisF 0.44 IKLFDK_16705 recombination-associated protein RdgC low > 98
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS50570 hisF;go_function=imidazoleglycerol-phosphate imidazole glycerol phosphate synthase subunit HisF 0.44 DQ20_RS40455 rdgC;inference=COORDINATES recombination-associated protein RdgC low > 101
Pseudomonas aeruginosa MRSN321 0.43 DY961_RS11530 hisF;go_function=imidazoleglycerol-phosphate imidazole glycerol phosphate synthase subunit HisF 0.44 DY961_RS00580 rdgC;inference=COORDINATES recombination-associated protein RdgC low > 100
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF 0.29 BPHYT_RS06215 recombinase RdgC low > 109
Paraburkholderia graminis OAS925 0.42 ABIE53_003695 cyclase 0.29 ABIE53_001446 recombination associated protein RdgC — —
Pseudomonas sp. BP01 0.42 JOY50_RS25520 hisF imidazole glycerol phosphate synthase subunit HisF 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC low > 84
Pseudomonas stutzeri RCH2 0.42 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit 0.40 Psest_1532 DNA recombination-dependent growth factor C — —
Pseudomonas putida KT2440 0.42 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.43 PP_1702 Recombination-associated protein RdgC low > 96
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.42 AO353_02515 recombination-associated protein RdgC low > 101
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS20315 imidazole glycerol phosphate synthase 0.34 HSERO_RS21640 recombinase RdgC low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.43 Psyr_1588 Putative exonuclease, RdgC — —
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF 0.43 Psyr_1588 Putative exonuclease, RdgC low > 86
Pseudomonas simiae WCS417 0.41 PS417_01580 imidazole glycerol phosphate synthase 0.40 PS417_09245 recombinase RdgC low > 88
Marinobacter adhaerens HP15 0.41 HP15_3009 protein containing histidine biosynthesis, HisF domain 0.40 HP15_1221 recombination-associated protein rdgC — —
Pseudomonas sp. RS175 0.41 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF 0.42 PFR28_03182 Recombination-associated protein RdgC low > 88
Pseudomonas sp. SVBP6 0.41 COO64_RS00210 hisF imidazole glycerol phosphate synthase subunit HisF 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC low > 93
Dechlorosoma suillum PS 0.41 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit 0.31 Dsui_2147 DNA recombination-dependent growth factor C — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C low > 87
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.40 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas sp. DMC3 0.41 GFF4095 Imidazole glycerol phosphate synthase subunit HisF 0.41 GFF2574 Recombination-associated protein RdgC low > 89
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF 0.40 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas lactucae CFBP13502 0.41 GEMAOFIL_00536 Imidazole glycerol phosphate synthase subunit HisF 0.40 GEMAOFIL_01972 Recombination-associated protein RdgC low > 96
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_09795 imidazole glycerol phosphate synthase subunit HisF 0.43 AO356_19265 recombination-associated protein RdgC low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.27 GFF5355 DNA recombination-dependent growth factor C — —
Pseudomonas orientalis W4I3 0.40 QF045_RS04650 imidazole glycerol phosphate synthase subunit HisF 0.40 QF045_RS11910 recombination-associated protein RdgC low > 93
Pseudomonas segetis P6 0.40 MPMX49_04299 Imidazole glycerol phosphate synthase subunit HisF 0.41 MPMX49_01735 Recombination-associated protein RdgC low > 75
Castellaniella sp019104865 MT123 0.39 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF 0.33 ABCV34_RS04480 recombination-associated protein RdgC — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2291 imidazoleglycerol phosphate synthase, cyclase subunit 0.29 B158DRAFT_1192 DNA recombination-dependent growth factor C low > 40
Variovorax sp. SCN45 0.38 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit 0.24 GFF5080 DNA recombination-dependent growth factor RdgC — —

Not shown: 40 genomes with orthologs for CSW01_05775 only; 0 genomes with orthologs for CSW01_03755 only