Conservation of cofitness between CSW01_03860 and CSW01_03755 in Vibrio cholerae E7946 ATCC 55056

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03860 protein translocase subunit SecD 1.0 CSW01_03755 recombination-associated protein RdgC 0.68 12
Rahnella sp. WP5 0.67 EX31_RS22105 protein translocase subunit SecD 0.58 EX31_RS21990 recombination-associated protein RdgC — —
Serratia liquefaciens MT49 0.66 IAI46_04850 protein translocase subunit SecD 0.58 IAI46_04710 recombination-associated protein RdgC — —
Erwinia tracheiphila SCR3 0.65 LU632_RS18510 secD protein translocase subunit SecD 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC — —
Pantoea sp. MT58 0.65 IAI47_14795 protein translocase subunit SecD 0.58 IAI47_14910 recombination-associated protein RdgC — —
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_16280 secD protein translocase subunit SecD 0.57 IJEDHG_26160 rdgC recombination-associated protein RdgC — —
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS10400 protein translocase subunit SecD 0.57 PagCFBP13505_RS10255 recombination-associated protein RdgC — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS15980 protein translocase subunit SecD 0.55 HER17_RS16060 recombination-associated protein RdgC — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02475 protein translocase subunit SecD 0.57 ECOLIN_RS02385 recombination-associated protein RdgC — —
Escherichia coli BW25113 0.63 b0408 secD protein export protein SecD (NCBI) 0.57 b0393 rdgC recombination associated protein (NCBI) — —
Escherichia coli BL21 0.63 ECD_00356 SecYEG protein translocase auxillary subunit 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function — —
Dickeya dadantii 3937 0.62 DDA3937_RS05480 protein translocase subunit SecD 0.58 DDA3937_RS05405 recombination-associated protein RdgC — —
Klebsiella michiganensis M5al 0.62 BWI76_RS06310 protein translocase subunit SecD 0.57 BWI76_RS06205 recombination-associated protein RdgC — —
Dickeya dianthicola 67-19 0.62 HGI48_RS05540 protein translocase subunit SecD 0.59 HGI48_RS05465 recombination-associated protein RdgC — —
Dickeya dianthicola ME23 0.62 DZA65_RS05865 protein translocase subunit SecD 0.59 DZA65_RS05790 recombination-associated protein RdgC — —
Erwinia amylovora T8 0.61 OLJFJH_18115 protein translocase subunit SecD 0.58 OLJFJH_18235 recombination-associated protein RdgC — —
Enterobacter sp. TBS_079 0.61 MPMX20_00999 Protein translocase subunit SecD 0.56 MPMX20_00982 Recombination-associated protein RdgC — —
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2563 protein-export membrane protein, SecD/SecF family 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4307 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.57 GFF4290 DNA recombination-dependent growth factor C — —
Shewanella amazonensis SB2B 0.61 Sama_2191 secD preprotein translocase subunit SecD (RefSeq) 0.49 Sama_1072 rdgC recombination associated protein (RefSeq) low > 62
Escherichia fergusonii Becca 0.61 EFB2_03649 Protein translocase subunit SecD 0.57 EFB2_03663 Recombination-associated protein RdgC — —
Escherichia coli ECRC99 0.61 KEDOAH_19470 secD Protein translocase subunit SecD 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC100 0.61 OKFHMN_08495 secD Protein translocase subunit SecD 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC62 0.61 BNILDI_22845 secD Protein translocase subunit SecD 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC — —
Escherichia coli ECOR27 0.61 NOLOHH_01430 secD Protein translocase subunit SecD 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC98 0.61 JDDGAC_12150 secD Protein translocase subunit SecD 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03268 Protein translocase subunit SecD 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC — —
Escherichia coli ECRC101 0.61 MCAODC_27720 secD Protein translocase subunit SecD 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC102 0.61 NIAGMN_06550 secD Protein translocase subunit SecD 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC low > 80
Escherichia coli ECOR38 0.61 HEPCGN_07135 secD Protein translocase subunit SecD 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC — —
Klebsiella pneumoniae MKP103 0.61 KDGMDA_14405 Protein translocase subunit SecD 0.58 KDGMDA_14285 recombination-associated protein RdgC — —
Alteromonas macleodii MIT1002 0.60 MIT1002_02811 preprotein translocase subunit SecD 0.37 MIT1002_00749 Recombination-associated protein RdgC low > 70
Shewanella loihica PV-4 0.60 Shew_2335 secD preprotein translocase subunit SecD (RefSeq) 0.48 Shew_2751 rdgC recombination associated protein (RefSeq) — —
Shewanella sp. ANA-3 0.60 Shewana3_1437 secD preprotein translocase subunit SecD (RefSeq) 0.49 Shewana3_2881 rdgC recombination associated protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO3111 secD-2 protein-export membrane protein SecD (NCBI ptt file) 0.49 SO1556 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.48 Psest_1244 protein-export membrane protein, SecD/SecF family 0.40 Psest_1532 DNA recombination-dependent growth factor C — —
Pseudomonas sp. SVBP6 0.47 COO64_RS03860 secD protein translocase subunit SecD 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC — —
Pseudomonas aeruginosa PA14 0.47 IKLFDK_19675 Protein translocase subunit SecD 0.44 IKLFDK_16705 recombination-associated protein RdgC — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4880 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C — —
Pseudomonas sp. BP01 0.46 JOY50_RS22855 secD protein translocase subunit SecD 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3196 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C — —
Pseudomonas putida KT2440 0.46 PP_0835 Sec Translocation Complex SecD subunit 0.43 PP_1702 Recombination-associated protein RdgC — —
Pseudomonas sp. S08-1 0.46 OH686_17440 Protein translocase subunit SecD 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein 0.43 Psyr_1588 Putative exonuclease, RdgC — —
Marinobacter adhaerens HP15 0.46 HP15_1481 preprotein translocase subunit SecD 0.40 HP15_1221 recombination-associated protein rdgC — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein 0.43 Psyr_1588 Putative exonuclease, RdgC — —
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04799 Protein translocase subunit SecD 0.40 GEMAOFIL_01972 Recombination-associated protein RdgC — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS24890 protein translocase subunit SecD 0.40 PFLU_RS09255 recombination-associated protein RdgC — —
Pseudomonas simiae WCS417 0.45 PS417_23235 preprotein translocase subunit SecD 0.40 PS417_09245 recombinase RdgC — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS24890 protein translocase subunit SecD 0.40 PFLU_RS09255 recombination-associated protein RdgC — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3008 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C — —
Pseudomonas segetis P6 0.45 MPMX49_01500 Protein translocase subunit SecD 0.41 MPMX49_01735 Recombination-associated protein RdgC — —
Pseudomonas sp. RS175 0.45 PFR28_00279 Protein translocase subunit SecD 0.42 PFR28_03182 Recombination-associated protein RdgC — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_06680 preprotein translocase subunit SecD 0.43 AO356_19265 recombination-associated protein RdgC — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2518 protein-export membrane protein, SecD/SecF family 0.29 B158DRAFT_1192 DNA recombination-dependent growth factor C — —
Pseudomonas sp. DMC3 0.44 GFF4357 Protein translocase subunit SecD 0.41 GFF2574 Recombination-associated protein RdgC — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_15800 preprotein translocase subunit SecD 0.42 AO353_02515 recombination-associated protein RdgC — —
Dechlorosoma suillum PS 0.44 Dsui_3325 protein-export membrane protein, SecD/SecF family 0.31 Dsui_2147 DNA recombination-dependent growth factor C — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS26650 protein translocase subunit SecD 0.29 QEN71_RS20685 recombination-associated protein RdgC — —
Ralstonia solanacearum UW163 0.43 UW163_RS07930 protein translocase subunit SecD 0.30 UW163_RS01150 recombination-associated protein RdgC — —
Variovorax sp. SCN45 0.43 GFF5485 Protein translocase subunit SecD 0.24 GFF5080 DNA recombination-dependent growth factor RdgC — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05695 protein translocase subunit SecD 0.30 RALBFv3_RS12420 recombination-associated protein RdgC — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11605 protein translocase subunit SecD 0.28 RPSI07_RS20910 recombination-associated protein RdgC — —
Ralstonia solanacearum GMI1000 0.42 RS_RS13585 protein translocase subunit SecD 0.29 RS_RS03100 recombination-associated protein RdgC — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04668 preprotein translocase subunit SecD 0.29 H281DRAFT_00319 recombination associated protein RdgC — —
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03420 preprotein translocase subunit SecD 0.29 BPHYT_RS06215 recombinase RdgC — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS01290 protein translocase subunit SecD 0.30 ABZR87_RS18475 recombination-associated protein RdgC — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.2170.1 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09530 protein translocase subunit SecD 0.31 ABZR86_RS16505 recombination-associated protein RdgC — —
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS17410 preprotein translocase subunit SecD 0.28 RR42_RS17820 recombinase RdgC — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS06220 preprotein translocase subunit SecD 0.34 HSERO_RS21640 recombinase RdgC — —
Lysobacter sp. OAE881 0.39 ABIE51_RS15010 protein translocase subunit SecD 0.31 ABIE51_RS01300 recombination-associated protein RdgC — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15355 protein translocase subunit SecD 0.33 ABCV34_RS04480 recombination-associated protein RdgC — —
Paraburkholderia graminis OAS925 0.39 ABIE53_000829 preprotein translocase subunit SecD 0.29 ABIE53_001446 recombination associated protein RdgC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2568 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.27 GFF5355 DNA recombination-dependent growth factor C — —
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_09990 secD protein translocase subunit SecD 0.29 OKGIIK_13190 rdgC recombination-associated protein RdgC — —
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS06850 protein translocase subunit SecD 0.30 LRK53_RS03480 recombination-associated protein RdgC — —
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS03120 protein translocase subunit SecD 0.30 LRK54_RS10690 recombination-associated protein RdgC — —
Rhodanobacter denitrificans MT42 0.37 LRK55_RS02870 protein translocase subunit SecD 0.30 LRK55_RS10330 recombination-associated protein RdgC — —

Not shown: 17 genomes with orthologs for CSW01_03860 only; 0 genomes with orthologs for CSW01_03755 only