Conservation of cofitness between BWI76_RS00865 and BWI76_RS08720 in Klebsiella michiganensis M5al

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS00865 DNA-binding transcriptional regulator OxyR 1.0 BWI76_RS08720 imidazolonepropionase 0.31 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF2347 Hydrogen peroxide-inducible genes activator 0.71 GFF663 Imidazolonepropionase (EC 3.5.2.7) low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_4424 Transcriptional regulator 0.73 EX28DRAFT_2223 imidazolonepropionase (EC 3.5.2.7) — —
Enterobacter sp. TBS_079 0.96 MPMX20_04519 Hydrogen peroxide-inducible genes activator 0.72 MPMX20_01396 Imidazolonepropionase low > 85
Escherichia coli ECOR38 0.96 HEPCGN_12210 oxyR DNA-binding transcriptional regulator OxyR 0.46 HEPCGN_01350 hutI imidazolonepropionase low > 87
Dickeya dianthicola ME23 0.89 DZA65_RS21450 DNA-binding transcriptional regulator OxyR 0.46 DZA65_RS15940 imidazolonepropionase low > 75
Dickeya dianthicola 67-19 0.89 HGI48_RS20405 DNA-binding transcriptional regulator OxyR 0.47 HGI48_RS15140 imidazolonepropionase low > 71
Dickeya dadantii 3937 0.89 DDA3937_RS00970 DNA-binding transcriptional regulator OxyR 0.46 DDA3937_RS15060 imidazolonepropionase low > 74
Serratia liquefaciens MT49 0.88 IAI46_24475 DNA-binding transcriptional regulator OxyR 0.46 IAI46_10610 imidazolonepropionase low > 86
Pantoea sp. MT58 0.88 IAI47_00930 DNA-binding transcriptional regulator OxyR 0.48 IAI47_13255 imidazolonepropionase low > 76
Rahnella sp. WP5 0.88 EX31_RS14170 DNA-binding transcriptional regulator OxyR 0.49 EX31_RS06720 imidazolonepropionase low > 89
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_13340 DNA-binding transcriptional regulator OxyR 0.52 CSW01_06095 imidazolonepropionase low > 62
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS04765 LysR substrate-binding domain-containing protein 0.47 LRK54_RS16230 imidazolonepropionase low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS04545 LysR substrate-binding domain-containing protein 0.48 LRK55_RS15980 imidazolonepropionase low > 63
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_01995 lysR DNA-binding transcriptional regulator OxyR 0.47 OKGIIK_08425 hutI imidazolonepropionase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.4224.1 Hydrogen peroxide-inducible genes activator 0.44 Xcc-8004.3295.1 Imidazolonepropionase (EC 3.5.2.7) low > 74
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS19355 DNA-binding transcriptional regulator OxyR 0.48 ABZR86_RS07870 imidazolonepropionase low > 74
Lysobacter sp. OAE881 0.39 ABIE51_RS05475 LysR substrate-binding domain-containing protein 0.42 ABIE51_RS06250 imidazolonepropionase 0.41 20
Rhodospirillum rubrum S1H 0.37 Rru_A0334 Transcriptional Regulator, LysR family (NCBI) 0.44 Rru_A1303 Imidazolonepropionase (NCBI) low > 58
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0202 transcriptional regulator, LysR family 0.51 Psyr_4835 imidazolonepropionase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0202 transcriptional regulator, LysR family 0.51 Psyr_4835 imidazolonepropionase low > 86
Pseudomonas putida KT2440 0.36 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.51 PP_5030 Imidazolonepropionase low > 96
Castellaniella sp019104865 MT123 0.36 ABCV34_RS03575 LysR substrate-binding domain-containing protein 0.46 ABCV34_RS12775 imidazolonepropionase low > 48
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4353 Hydrogen peroxide-inducible genes activator 0.52 Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 103
Azospirillum brasilense Sp245 0.35 AZOBR_RS31340 LysR family transcriptional regulator 0.51 AZOBR_RS21725 imidazolonepropionase low > 97
Azospirillum sp. SherDot2 0.35 MPMX19_04930 Hydrogen peroxide-inducible genes activator 0.49 MPMX19_04938 Imidazolonepropionase low > 112
Pseudomonas sp. S08-1 0.35 OH686_13510 Hydrogen peroxide-inducible genes activator 0.46 OH686_16735 imidazolonepropionase low > 80
Pseudomonas simiae WCS417 0.35 PS417_27865 LysR family transcriptional regulator 0.50 PS417_01760 imidazolonepropionase low > 88
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01255 LysR substrate-binding domain-containing protein 0.49 ABZR87_RS01015 imidazolonepropionase low > 80
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0567 Transcriptional regulator 0.49 B158DRAFT_1437 imidazolonepropionase (EC 3.5.2.7) low > 40
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04673 transcriptional regulator, LysR family 0.46 H281DRAFT_04869 imidazolonepropionase low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12385 LysR family transcriptional regulator 0.50 AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 104
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS05605 hydrogen peroxide-inducible genes activator 0.48 RALBFv3_RS05380 imidazolonepropionase low > 76
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS17385 LysR family transcriptional regulator 0.47 RR42_RS16905 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 128
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29545 hydrogen peroxide-inducible genes activator 0.50 PFLU_RS01815 imidazolonepropionase low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29545 hydrogen peroxide-inducible genes activator 0.50 PFLU_RS01815 imidazolonepropionase low > 109
Ralstonia solanacearum UW163 0.34 UW163_RS08020 hydrogen peroxide-inducible genes activator 0.48 UW163_RS08245 imidazolonepropionase — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_773 Hydrogen peroxide-inducible genes activator 0.53 PfGW456L13_317 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 87
Ralstonia solanacearum GMI1000 0.34 RS_RS13470 hydrogen peroxide-inducible genes activator 0.49 RS_RS13240 imidazolonepropionase low > 80
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS26625 LysR substrate-binding domain-containing protein 0.49 QEN71_RS23495 imidazolonepropionase low > 153
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS03470 LysR family transcriptional regulator 0.48 BPHYT_RS07575 imidazolonepropionase low > 109
Pseudomonas sp. RS175 0.34 PFR28_04434 Hydrogen peroxide-inducible genes activator 0.50 PFR28_04972 Imidazolonepropionase low > 88
Ralstonia solanacearum PSI07 0.34 RPSI07_RS11690 hydrogen peroxide-inducible genes activator 0.49 RPSI07_RS11925 imidazolonepropionase low > 81
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09315 LysR family transcriptional regulator 0.50 AO353_12280 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2106 Hydrogen peroxide-inducible genes activator 0.52 Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 87
Sinorhizobium meliloti 1021 0.34 SMc00818 hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) 0.40 SM_b21166 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 103
Agrobacterium fabrum C58 0.33 Atu4641 LysR family transcriptional regulator 0.47 Atu3934 imidazolonepropionase low > 89
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS06075 hydrogen peroxide-inducible genes activator 0.29 ABI39_RS01820 imidazolonepropionase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.32 BT4716 redox-sensitive transcriptional activator (NCBI ptt file) 0.26 BT2692 imidazolonepropionase (NCBI ptt file) low > 81
Acidovorax sp. GW101-3H11 0.32 Ac3H11_784 Hydrogen peroxide-inducible genes activator 0.44 Ac3H11_2550 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 79
Bacteroides ovatus ATCC 8483 0.31 BACOVA_05567 LysR substrate binding domain protein 0.26 BACOVA_00993 imidazolonepropionase low > 94
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03811 LysR-family transcriptional regulator 0.47 CCNA_01011 imidazolonepropionase — —
Caulobacter crescentus NA1000 0.31 CCNA_03811 LysR-family transcriptional regulator 0.47 CCNA_01011 imidazolonepropionase low > 66
Phaeobacter inhibens DSM 17395 0.30 PGA1_78p00040 hydrogen peroxide-inducible genes activator OxyR 0.46 PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) (from data) — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0159 Transcriptional regulator 0.45 Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 68
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS02160 hydrogen peroxide-inducible genes activator 0.27 HMPREF1181_RS00350 imidazolonepropionase low > 56
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF2803 Hydrogen peroxide-inducible genes activator 0.51 GFF3588 Imidazolonepropionase (EC 3.5.2.7) low > 90
Rhizobium sp. OAE497 0.29 ABIE40_RS29270 LysR substrate-binding domain-containing protein 0.46 ABIE40_RS20350 imidazolonepropionase low > 107
Bosea sp. OAE506 0.29 ABIE41_RS01195 hydrogen peroxide-inducible genes activator 0.48 ABIE41_RS23640 imidazolonepropionase low > 77
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01140 hydrogen peroxide-inducible genes activator 0.31 HMPREF1078_RS11585 imidazolonepropionase low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_13765 DNA-binding transcriptional regulator OxyR 0.23 CA264_08870 imidazolonepropionase 0.31 46
Alteromonas macleodii MIT1002 0.27 MIT1002_01120 Morphology and auto-aggregation control protein 0.45 MIT1002_00902 Imidazolonepropionase low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS12755 hydrogen peroxide-inducible genes activator 0.44 A4249_RS06605 imidazolonepropionase low > 48
Shewanella oneidensis MR-1 0.26 SO1328 transcriptional regulator, LysR family (NCBI ptt file) 0.50 SO0095 hutI Imidazolonepropionase (EC 3.5.2.7) (from data) low > 76
Shewanella sp. ANA-3 0.26 Shewana3_3046 LysR family transcriptional regulator (RefSeq) 0.50 Shewana3_0098 imidazolonepropionase (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_1035 LysR family transcriptional regulator (RefSeq) 0.50 Shew_3759 imidazolonepropionase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.24 Sama_0860 LysR family transcriptional regulator (RefSeq) 0.49 Sama_0080 imidazolonepropionase (RefSeq) low > 62

Not shown: 26 genomes with orthologs for BWI76_RS00865 only; 4 genomes with orthologs for BWI76_RS08720 only