Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS14915 in Burkholderia phytofirmans PsJN

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS14915 phosphoserine aminotransferase 0.72 5
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.81 ABIE53_003159 phosphoserine aminotransferase 0.75 6
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.96 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme 0.58 8
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.93 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 6
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.66 HSERO_RS18435 MFS transporter — —
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.57 Dsui_1939 phosphoserine aminotransferase — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.55 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.52 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.52 HP15_1361 phosphoserine aminotransferase — —
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.55 PP_1768 phosphoserine aminotransferase — —
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.51 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 52
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.57 OH686_20865 phosphoserine transaminase — —
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.56 Psest_1983 phosphoserine aminotransferase — —
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.55 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.48 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.61 42
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.56 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.55 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas sp. RS175 0.74 PFR28_05091 Phosphomethylpyrimidine synthase 0.56 PFR28_00906 Phosphoserine aminotransferase — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.44 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.55 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.56 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.56 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.55 PS417_08120 MFS transporter — —
Lysobacter sp. OAE881 0.73 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.51 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.72 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC 0.40 ABZR88_RS09230 3-phosphoserine/phosphohydroxythreonine transaminase — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.52 MPMX26_02219 Phosphoserine aminotransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.71 CA265_RS20165 phosphomethylpyrimidine synthase ThiC 0.41 CA265_RS09005 phosphoserine transaminase — —
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.65 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase 0.38 75
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.53 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella loihica PV-4 0.69 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.47 Shew_1950 phosphoserine aminotransferase (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.66 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase 0.53 69
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.67 RR42_RS04455 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.66 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.66 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella amazonensis SB2B 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.44 Sama_1732 phosphoserine aminotransferase (RefSeq) — —
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.54 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.67 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.64 7
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.55 MPMX20_01566 Phosphoserine aminotransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.54 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.52 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.53 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.56 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase 0.78 9
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.48 B158DRAFT_2322 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.56 EFB2_03157 Phosphoserine aminotransferase low > 86
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.55 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.67 62
Escherichia coli ECRC102 0.67 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.55 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.55 OHPLBJKB_02761 Phosphoserine aminotransferase — —
Escherichia coli ECRC98 0.67 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.55 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 86
Escherichia coli ECRC101 0.67 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.55 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Escherichia coli ECRC100 0.67 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.55 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.83 44
Escherichia coli ECRC99 0.67 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.55 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.55 b0907 serC phosphoserine aminotransferase (NCBI) 0.52 32
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.55 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.77 43
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.55 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.60 13
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.56 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.89 22
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.53 BWI76_RS09755 phosphoserine transaminase low > 92
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.51 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase low > 76
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.55 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.53 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.64 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Shewanella oneidensis MR-1 0.67 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.44 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.49 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase — —
Alteromonas macleodii MIT1002 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase 0.49 MIT1002_02192 Phosphoserine aminotransferase — —
Shewanella sp. ANA-3 0.66 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.44 Shewana3_1973 phosphoserine aminotransferase (RefSeq) — —
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.54 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase 0.66 56
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.55 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.65 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.64 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.61 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase — —
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC 0.38 ABI39_RS16905 3-phosphoserine/phosphohydroxythreonine transaminase low > 72
Bacteroides stercoris CC31F 0.56 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC 0.40 HMPREF1181_RS16870 3-phosphoserine/phosphohydroxythreonine transaminase — —
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC 0.38 HMPREF1058_RS04300 3-phosphoserine/phosphohydroxythreonine transaminase low > 67
Bacteroides ovatus ATCC 8483 0.56 BACOVA_02358 thiamine biosynthesis protein ThiC 0.40 BACOVA_04029 phosphoserine transaminase 0.76 36
Bacteroides thetaiotaomicron VPI-5482 0.56 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) 0.41 BT1153 phosphoserine aminotransferase (NCBI ptt file) 0.43 31
Parabacteroides merdae CL09T00C40 0.56 HMPREF1078_RS03485 phosphomethylpyrimidine synthase ThiC 0.40 HMPREF1078_RS15400 3-phosphoserine/phosphohydroxythreonine transaminase low > 61

Not shown: 17 genomes with orthologs for BPHYT_RS13220 only; 2 genomes with orthologs for BPHYT_RS14915 only