Conservation of cofitness between BPHYT_RS17525 and BPHYT_RS06985 in Burkholderia phytofirmans PsJN

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17525 glutaredoxin 1.0 BPHYT_RS06985 fumarate hydratase 0.38 17
Paraburkholderia graminis OAS925 0.97 ABIE53_003665 monothiol glutaredoxin 0.98 ABIE53_001662 fumarate hydratase class I low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_05690 monothiol glutaredoxin 0.98 H281DRAFT_04956 fumarase, class I, homodimeric
Paraburkholderia sabiae LMG 24235 0.90 QEN71_RS27680 Grx4 family monothiol glutaredoxin 0.97 QEN71_RS23780 fumarate hydratase low > 153
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS06600 monothiol glutaredoxin, Grx4 family 0.86 RALBFv3_RS02460 fumarate hydratase
Ralstonia solanacearum UW163 0.81 UW163_RS07025 monothiol glutaredoxin, Grx4 family 0.86 UW163_RS11265 fumarate hydratase
Ralstonia solanacearum GMI1000 0.81 RS_RS14550 monothiol glutaredoxin, Grx4 family 0.86 RS_RS09830 fumarate hydratase
Ralstonia solanacearum PSI07 0.81 RPSI07_RS10625 monothiol glutaredoxin, Grx4 family 0.92 RPSI07_RS14865 fumarate hydratase
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS02265 Grx4 family monothiol glutaredoxin 0.87 ABZR87_RS14375 fumarate hydratase 0.49 10
Acidovorax sp. GW101-3H11 0.78 Ac3H11_4778 Glutaredoxin-related protein 0.76 Ac3H11_941 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Variovorax sp. SCN45 0.77 GFF2522 Glutaredoxin-related protein 0.77 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) low > 127
Variovorax sp. OAS795 0.77 ABID97_RS07180 Grx4 family monothiol glutaredoxin 0.77 ABID97_RS17550 fumarate hydratase low > 91
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS18485 glutaredoxin 0.93 RR42_RS13905 fumarate hydratase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF1268 Glutaredoxin-related protein 0.79 GFF4099 Fumarate hydratase class I, aerobic (EC 4.2.1.2) low > 90
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS19865 glutaredoxin 0.82 HSERO_RS07760 fumarate hydratase
Dechlorosoma suillum PS 0.70 Dsui_0118 monothiol glutaredoxin, Grx4 family 0.76 Dsui_2001 hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily
Castellaniella sp019104865 MT123 0.69 ABCV34_RS14065 Grx4 family monothiol glutaredoxin 0.75 ABCV34_RS09450 fumarate hydratase
Sphingomonas koreensis DSMZ 15582 0.68 Ga0059261_0058 monothiol glutaredoxin, Grx4 family 0.70 Ga0059261_3334 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region
Bosea sp. OAE506 0.64 ABIE41_RS08625 Grx4 family monothiol glutaredoxin 0.19 ABIE41_RS00110 fumarate hydratase
Lysobacter sp. OAE881 0.63 ABIE51_RS15380 Grx4 family monothiol glutaredoxin 0.77 ABIE51_RS12620 fumarate hydratase low > 62
Rhodospirillum rubrum S1H 0.62 Rru_A0705 Glutaredoxin-related protein (NCBI) 0.20 Rru_A2206 tartrate dehydrogenase (NCBI)
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.2014.1 Glutaredoxin-related protein 0.76 Xcc-8004.3506.1 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Dinoroseobacter shibae DFL-12 0.61 Dshi_1710 glutaredoxin-like protein (RefSeq) 0.58 Dshi_1426 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (RefSeq)
Rhodopseudomonas palustris CGA009 0.60 TX73_008250 Grx4 family monothiol glutaredoxin 0.22 TX73_020085 fumarate hydratase low > 86
Azospirillum sp. SherDot2 0.60 MPMX19_00477 Glutaredoxin 4 0.19 MPMX19_03166 Fumarate hydratase class I, aerobic
Azospirillum brasilense Sp245 0.59 AZOBR_RS04325 glutaredoxin 0.20 AZOBR_RS10315 fumarate hydratase
Magnetospirillum magneticum AMB-1 0.58 AMB_RS10680 monothiol glutaredoxin, Grx4 family 0.19 AMB_RS06760 fumarate hydratase
Marinobacter adhaerens HP15 0.53 HP15_751 monothiol glutaredoxin 0.72 HP15_1143 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
Pseudomonas sp. S08-1 0.52 OH686_20435 monothiol glutaredoxin, Grx4 family 0.75 OH686_18780 Fumarate hydratase class I, aerobic
Enterobacter sp. TBS_079 0.51 MPMX20_01983 Glutaredoxin 4 0.19 MPMX20_02966 Fumarate hydratase class I, anaerobic low > 85
Acinetobacter radioresistens SK82 0.51 MPMX26_01058 Glutaredoxin 4 0.74 MPMX26_00411 Fumarate hydratase class I, aerobic low > 36
Klebsiella michiganensis M5al 0.51 BWI76_RS16490 glutaredoxin 0.19 BWI76_RS16275 fumarate hydratase FumA low > 92
Enterobacter asburiae PDN3 0.51 EX28DRAFT_1651 monothiol glutaredoxin, Grx4 family 0.19 EX28DRAFT_1609 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region low > 76
Escherichia coli ECOR27 0.51 NOLOHH_17935 grxD monothiol glutaredoxin 4 0.19 NOLOHH_18150 fumB class I fumarate hydratase low > 75
Escherichia coli Nissle 1917 0.51 ECOLIN_RS09220 monothiol glutaredoxin 4 0.20 ECOLIN_RS23850 class I fumarate hydratase low > 55
Escherichia coli ECRC62 0.51 BNILDI_16725 grxD monothiol glutaredoxin 4 0.19 BNILDI_16940 fumB class I fumarate hydratase low > 75
Erwinia tracheiphila SCR3 0.51 LU632_RS11215 Grx4 family monothiol glutaredoxin 0.19 LU632_RS01205 class I fumarate hydratase FumA
Escherichia coli ECRC102 0.51 NIAGMN_00650 grxD monothiol glutaredoxin 4 0.19 NIAGMN_10370 fumB class I fumarate hydratase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3621 Glutaredoxin-related protein 0.19 GFF1477 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) low > 78
Escherichia coli ECRC101 0.51 MCAODC_17995 grxD monothiol glutaredoxin 4 0.19 MCAODC_03035 fumB class I fumarate hydratase low > 87
Escherichia coli BW25113 0.51 b1654 ydhD hypothetical protein (NCBI) 0.19 b1612 fumA fumarate hydratase (fumarase A), aerobic Class I (NCBI)
Escherichia coli ECOR38 0.51 HEPCGN_05800 grxD monothiol glutaredoxin 4 0.19 HEPCGN_11160 fumB class I fumarate hydratase low > 87
Escherichia coli ECRC99 0.51 KEDOAH_00695 grxD monothiol glutaredoxin 4 0.19 KEDOAH_15640 fumB class I fumarate hydratase
Pseudomonas stutzeri RCH2 0.51 Psest_1292 monothiol glutaredoxin, Grx4 family 0.76 Psest_3193 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_02071 Glutaredoxin 4 0.19 OHPLBJKB_03922 Fumarate hydratase class I, anaerobic low > 73
Rahnella sp. WP5 0.51 EX31_RS13820 Grx4 family monothiol glutaredoxin 0.20 EX31_RS01160 fumarate hydratase
Escherichia coli ECRC98 0.51 JDDGAC_02005 grxD monothiol glutaredoxin 4 0.19 JDDGAC_16160 fumB class I fumarate hydratase low > 86
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_1228 monothiol glutaredoxin, Grx4 family 0.72 B158DRAFT_1342 fumarase, class I, homodimeric (EC 4.2.1.2)
Escherichia coli ECRC100 0.51 OKFHMN_27415 grxD monothiol glutaredoxin 4 0.19 OKFHMN_12525 fumB class I fumarate hydratase 0.68 24
Escherichia fergusonii Becca 0.51 EFB2_02339 Glutaredoxin 4 0.20 EFB2_04461 Fumarate hydratase class I, anaerobic low > 86
Pseudomonas putida KT2440 0.51 PP_1081 monothiol glutaredoxin 4 0.76 PP_0897 Fumarate hydratase, class I
Escherichia coli BL21 0.51 ECD_01624 glutaredoxin-4 0.19 ECD_01581 fumarate hydratase (fumarase A), aerobic Class I low > 61
Serratia liquefaciens MT49 0.50 IAI46_11260 Grx4 family monothiol glutaredoxin 0.19 IAI46_21370 fumarate hydratase low > 86
Dickeya dadantii 3937 0.50 DDA3937_RS12610 Grx4 family monothiol glutaredoxin 0.18 DDA3937_RS04540 fumarate hydratase low > 74
Shewanella loihica PV-4 0.49 Shew_1835 glutaredoxin-like protein (RefSeq) 0.71 Shew_1904 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_10225 monothiol glutaredoxin, Grx4 family 0.70 CSW01_06585 fumarate hydratase
Dickeya dianthicola ME23 0.49 DZA65_RS13125 Grx4 family monothiol glutaredoxin 0.18 DZA65_RS04420 fumarate hydratase low > 75
Pantoea sp. MT58 0.49 IAI47_10780 Grx4 family monothiol glutaredoxin 0.18 IAI47_20435 fumarate hydratase
Dickeya dianthicola 67-19 0.49 HGI48_RS12670 Grx4 family monothiol glutaredoxin 0.18 HGI48_RS04500 fumarate hydratase low > 71
Shewanella sp. ANA-3 0.49 Shewana3_1640 glutaredoxin-like protein (RefSeq) 0.69 Shewana3_2302 fumarase (RefSeq)
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3898 Glutaredoxin-related protein 0.77 Psyr_4031 fumarase
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1742 Glutaredoxin-related protein 0.76 PfGW456L13_1808 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Shewanella oneidensis MR-1 0.48 SO2880 glutaredoxin domain protein (NCBI ptt file) 0.70 SO2222 fumarate hydratase, class I, anaerobic, putative (NCBI ptt file)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3898 Glutaredoxin-related protein 0.77 Psyr_4031 fumarase
Alteromonas macleodii MIT1002 0.48 MIT1002_01235 Monothiol glutaredoxin 0.71 MIT1002_02009 Fumarate hydratase class I, anaerobic
Pectobacterium carotovorum WPP14 0.48 HER17_RS09250 Grx4 family monothiol glutaredoxin 0.18 HER17_RS17120 fumarate hydratase
Pseudomonas fluorescens SBW25 0.47 PFLU_RS05690 Grx4 family monothiol glutaredoxin 0.77 PFLU_RS24270 fumarate hydratase
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_18290 glutaredoxin 0.76 AO356_17810 fumarate hydratase
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS05690 Grx4 family monothiol glutaredoxin 0.77 PFLU_RS24270 fumarate hydratase
Pseudomonas sp. RS175 0.47 PFR28_03360 Glutaredoxin 4 0.76 PFR28_03458 Fumarate hydratase class I, aerobic
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_759 Glutaredoxin-related protein 0.76 Pf1N1B4_683 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Pseudomonas simiae WCS417 0.47 PS417_05605 glutaredoxin 0.77 PS417_22635 fumarate hydratase
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_04140 glutaredoxin 0.76 AO353_03795 fumarate hydratase
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5582 Glutaredoxin-related protein 0.76 Pf6N2E2_5489 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Shewanella amazonensis SB2B 0.47 Sama_1919 glutaredoxin-related protein (RefSeq) 0.70 Sama_1688 fumarate hydratase, class I, anaerobic, putative (RefSeq)

Not shown: 6 genomes with orthologs for BPHYT_RS17525 only; 10 genomes with orthologs for BPHYT_RS06985 only