Conservation of cofitness between BBR_RS18035 and BBR_RS20420 in Bifidobacterium breve UCC2003

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS18035 oligoribonuclease 1.0 BBR_RS20420 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.60 4
Mycobacterium tuberculosis H37Rv 0.42 Rv2511 Oligoribonuclease Orn 0.40 Rv1010 Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase) — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS04255 oligoribonuclease 0.20 QEN71_RS02130 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Ralstonia solanacearum UW163 0.33 UW163_RS15860 oligoribonuclease 0.22 UW163_RS01830 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS13950 oligoribonuclease 0.22 RALBFv3_RS11755 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS19520 oligoribonuclease 0.23 RPSI07_RS21460 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Paraburkholderia graminis OAS925 0.33 ABIE53_003119 oligoribonuclease 0.21 ABIE53_000800 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase — —
Variovorax sp. SCN45 0.33 GFF3960 3'-to-5' oligoribonuclease (orn) 0.21 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) low > 127
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS14720 oligoribonuclease 0.19 BPHYT_RS03305 ribosomal RNA small subunit methyltransferase A — —
Ralstonia solanacearum GMI1000 0.33 RS_RS04685 oligoribonuclease 0.23 RS_RS02580 ribosomal RNA small subunit methyltransferase A — —
Variovorax sp. OAS795 0.32 ABID97_RS08790 oligoribonuclease 0.21 ABID97_RS02525 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 91
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04301 oligoribonuclease 0.21 H281DRAFT_04640 dimethyladenosine transferase — —
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS14770 oligoribonuclease 0.23 RR42_RS02785 dimethyladenosine transferase — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_1677 3'-to-5' oligoribonuclease (orn) 0.20 Ac3H11_4327 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Escherichia coli ECOR38 0.32 HEPCGN_10540 orn oligoribonuclease 0.23 HEPCGN_08825 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia fergusonii Becca 0.32 EFB2_04373 Oligoribonuclease 0.22 EFB2_03992 Ribosomal RNA small subunit methyltransferase A — —
Escherichia coli ECRC62 0.32 BNILDI_06915 orn oligoribonuclease 0.23 BNILDI_08425 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03880 Oligoribonuclease 0.23 OHPLBJKB_03605 Ribosomal RNA small subunit methyltransferase A — —
Escherichia coli BW25113 0.32 b4162 yjeR orf, hypothetical protein (VIMSS) 0.23 b0051 ksgA dimethyladenosine transferase (NCBI) — —
Escherichia coli BL21 0.32 ECD_04032 oligoribonuclease 0.23 ECD_00055 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent — —
Escherichia coli ECOR27 0.32 NOLOHH_04575 orn oligoribonuclease 0.23 NOLOHH_03180 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli Nissle 1917 0.32 ECOLIN_RS24180 oligoribonuclease 0.22 ECOLIN_RS00285 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3360 Oligoribonuclease (3'->5' exoribonuclease) 0.23 EX28DRAFT_3645 ribosomal RNA small subunit methyltransferase A — —
Rahnella sp. WP5 0.31 EX31_RS08865 oligoribonuclease 0.22 EX31_RS03780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS07210 oligoribonuclease 0.23 HSERO_RS03540 dimethyladenosine transferase — —
Escherichia coli ECRC98 0.31 JDDGAC_15950 orn oligoribonuclease 0.23 JDDGAC_14430 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC102 0.31 NIAGMN_10160 orn oligoribonuclease 0.23 NIAGMN_08685 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Marinobacter adhaerens HP15 0.31 HP15_2506 oligoribonuclease 0.23 HP15_3278 dimethyladenosine transferase — —
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS09645 oligoribonuclease 0.23 ABZR87_RS07710 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1989 '3'-to-5' oligoribonuclease (orn)' transl_table=11 0.22 GFF190 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Escherichia coli ECRC101 0.31 MCAODC_02825 orn oligoribonuclease 0.23 MCAODC_01350 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Shewanella loihica PV-4 0.31 Shew_0559 oligoribonuclease (RefSeq) 0.24 Shew_0879 ksgA dimethyladenosine transferase (RefSeq) — —
Klebsiella michiganensis M5al 0.31 BWI76_RS02480 oligoribonuclease 0.23 BWI76_RS04520 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase — —
Escherichia coli ECRC100 0.31 OKFHMN_12315 orn oligoribonuclease 0.23 OKFHMN_10835 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC99 0.31 KEDOAH_15850 orn oligoribonuclease 0.23 KEDOAH_17320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Lysobacter sp. OAE881 0.31 ABIE51_RS09510 oligoribonuclease 0.24 ABIE51_RS05385 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Enterobacter sp. TBS_079 0.31 MPMX20_00443 Oligoribonuclease 0.22 MPMX20_00747 Ribosomal RNA small subunit methyltransferase A — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS06995 oligoribonuclease 0.22 ABCV34_RS09490 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2410.1 3'-to-5' oligoribonuclease (orn) 0.25 Xcc-8004.4271.1 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) — —
Dechlorosoma suillum PS 0.31 Dsui_3222 oligoribonuclease (3'->5' exoribonuclease) 0.21 Dsui_0039 dimethyladenosine transferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5731 3'-to-5' oligoribonuclease (orn) 0.20 GFF2466 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) low > 90
Acinetobacter radioresistens SK82 0.30 MPMX26_02630 Oligoribonuclease 0.26 MPMX26_00596 Ribosomal RNA small subunit methyltransferase A — —
Alteromonas macleodii MIT1002 0.30 MIT1002_00496 Oligoribonuclease 0.26 MIT1002_00781 Ribosomal RNA small subunit methyltransferase A — —
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_01765 oligoribonuclease 0.24 CSW01_02325 ribosomal RNA small subunit methyltransferase A — —
Erwinia tracheiphila SCR3 0.30 LU632_RS01950 orn oligoribonuclease 0.24 LU632_RS02730 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pantoea sp. MT58 0.30 IAI47_02540 oligoribonuclease 0.24 IAI47_16085 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas stutzeri RCH2 0.30 Psest_0500 Oligoribonuclease (3'->5' exoribonuclease) 0.22 Psest_3668 dimethyladenosine transferase — —
Dickeya dadantii 3937 0.30 DDA3937_RS18940 oligoribonuclease 0.24 DDA3937_RS18265 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Serratia liquefaciens MT49 0.30 IAI46_01575 oligoribonuclease 0.23 IAI46_03245 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS17690 oligoribonuclease 0.24 LRK55_RS12040 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1946 Oligoribonuclease (3'->5' exoribonuclease) 0.27 B158DRAFT_0788 dimethyladenosine transferase — —
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0564 Exonuclease 0.24 Psyr_4627 dimethyladenosine transferase — —
Dickeya dianthicola ME23 0.30 DZA65_RS20150 oligoribonuclease 0.23 DZA65_RS19340 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Dickeya dianthicola 67-19 0.30 HGI48_RS19035 oligoribonuclease 0.23 HGI48_RS18200 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS01910 oligoribonuclease 0.24 ABZR86_RS11270 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0564 Exonuclease 0.24 Psyr_4627 dimethyladenosine transferase — —
Pectobacterium carotovorum WPP14 0.29 HER17_RS02415 oligoribonuclease 0.22 HER17_RS02960 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3622 3'-to-5' oligoribonuclease (orn) 0.25 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas sp. RS175 0.29 PFR28_05113 Oligoribonuclease 0.24 PFR28_04064 Ribosomal RNA small subunit methyltransferase A — —
Shewanella oneidensis MR-1 0.29 SO0592 orn oligoribonuclease (NCBI ptt file) 0.24 SO3639 ksgA dimethyladenosine transferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.29 Sama_3032 oligoribonuclease (RefSeq) 0.24 Sama_2819 ksgA dimethyladenosine transferase (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_08695 oligoribonuclease 0.25 AO356_14335 rRNA methyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS17470 oligoribonuclease 0.24 LRK54_RS12305 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas putida KT2440 0.29 PP_4902 Oligoribonuclease 0.24 PP_0401 Ribosomal RNA small subunit methyltransferase A low > 96
Shewanella sp. ANA-3 0.28 Shewana3_0590 oligoribonuclease (RefSeq) 0.25 Shewana3_3209 ksgA dimethyladenosine transferase (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_07465 orn oligoribonuclease 0.24 OKGIIK_11625 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS02530 oligoribonuclease 0.24 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas simiae WCS417 0.28 PS417_02450 oligoribonuclease 0.24 PS417_25810 ribosomal RNA small subunit methyltransferase A — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_162 3'-to-5' oligoribonuclease (orn) 0.25 PfGW456L13_1200 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1420 3'-to-5' oligoribonuclease (orn) 0.25 Pf1N1B4_2528 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS02530 oligoribonuclease 0.24 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas sp. S08-1 0.28 OH686_09505 3'-to-5' oligoribonuclease (orn) 0.24 OH686_15040 ribosomal RNA small subunit methyltransferase A low > 80
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_13105 oligoribonuclease 0.24 AO353_07315 rRNA methyltransferase — —

Not shown: 0 genomes with orthologs for BBR_RS18035 only; 29 genomes with orthologs for BBR_RS20420 only