| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_2215 | | Na+/H+-dicarboxylate symporters | 1.0 | B158DRAFT_1339 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.60 | 12 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_01702 | | Glutamate-aspartate carrier protein | 0.63 | MIT1002_02006 | | L-serine dehydratase 1 | low | > 70 |
| Shewanella amazonensis SB2B | 0.45 | Sama_1319 | | symporter for L-glutamate, L-glutamine, and L-aspartate (from data) | 0.62 | Sama_1325 | | L-serine ammonia-lyase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_1726 | | sodium:dicarboxylate symporter (RefSeq) | 0.62 | Shewana3_2295 | | L-serine ammonia-lyase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.45 | Shew_2227 | | sodium:dicarboxylate symporter (RefSeq) | 0.61 | Shew_1625 | | L-serine dehydratase 1 (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.44 | SO1948 | | sodium:dicarboxylate symporter family protein (NCBI ptt file) | 0.62 | SO2248 | sdaA | L-serine dehydratase 1 (NCBI ptt file) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_4075 | | symporter for L-glutamate, L-glutamine, and L-proline (from data) | 0.65 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 67 |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_3350 | | Na+/H+-dicarboxylate symporters | 0.50 | Ga0059261_0220 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 68 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_05920 | | dicarboxylate/amino acid:cation symporter | 0.51 | CSW01_06565 | | L-serine ammonia-lyase | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.27 | ABZR86_RS00450 | | dicarboxylate/amino acid:cation symporter | 0.65 | ABZR86_RS19060 | | L-serine ammonia-lyase | low | > 74 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS06350 | | dicarboxylate/amino acid:cation symporter | 0.65 | ABIE51_RS16145 | | L-serine ammonia-lyase | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.26 | LU632_RS23310 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | LU632_RS13185 | sdaA | L-serine ammonia-lyase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS14145 | | glutamate/aspartate:proton symporter GltP | 0.54 | HER17_RS11315 | | L-serine ammonia-lyase | low | > 75 |
| Pantoea sp. MT58 | 0.26 | IAI47_17710 | | glutamate/aspartate:proton symporter GltP | 0.53 | IAI47_08785 | | L-serine ammonia-lyase | low | > 76 |
| Serratia liquefaciens MT49 | 0.26 | IAI46_01410 | | glutamate/aspartate:proton symporter GltP | 0.53 | IAI46_14795 | | L-serine ammonia-lyase | low | > 86 |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS07365 | | glutamate/aspartate:proton symporter GltP | 0.53 | HGI48_RS11300 | | L-serine ammonia-lyase | low | > 71 |
| Dickeya dianthicola ME23 | 0.25 | DZA65_RS07875 | | glutamate/aspartate:proton symporter GltP | 0.53 | DZA65_RS16005 | | L-serine ammonia-lyase | low | > 75 |
| Dickeya dadantii 3937 | 0.25 | DDA3937_RS07490 | | glutamate/aspartate:proton symporter GltP | 0.53 | DDA3937_RS11265 | | L-serine ammonia-lyase | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.1894.1 | | Proton/glutamate symport protein @ Sodium/glutamate symport protein | 0.67 | Xcc-8004.1601.1 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 74 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_11410 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | HEPCGN_17260 | tdcG | L-serine ammonia-lyase | low | > 87 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_15365 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | KEDOAH_09720 | tdcG | L-serine ammonia-lyase | — | — |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_05035 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | NOLOHH_10205 | tdcG | L-serine ammonia-lyase | low | > 75 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_16420 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | JDDGAC_22060 | tdcG | L-serine ammonia-lyase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS23590 | | glutamate/aspartate:proton symporter GltP | 0.53 | ECOLIN_RS17915 | | L-serine ammonia-lyase | low | > 55 |
| Escherichia coli BL21 | 0.25 | ECD_03949 | | glutamate/aspartate:proton symporter | 0.53 | ECD_02979 | | L-serine dehydratase 3, anaerobic | low | > 61 |
| Escherichia coli ECRC101 | 0.25 | MCAODC_03295 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | MCAODC_08940 | tdcG | L-serine ammonia-lyase | low | > 87 |
| Escherichia coli ECRC62 | 0.25 | BNILDI_06490 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | BNILDI_01320 | tdcG | L-serine ammonia-lyase | low | > 75 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_10630 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | NIAGMN_16190 | tdcG | L-serine ammonia-lyase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_03963 | | Proton/glutamate-aspartate symporter | 0.53 | OHPLBJKB_00588 | | L-serine dehydratase TdcG | low | > 73 |
| Escherichia fergusonii Becca | 0.25 | EFB2_04512 | | Proton/glutamate-aspartate symporter | 0.53 | EFB2_00702 | | L-serine dehydratase TdcG | low | > 86 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_12785 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | OKFHMN_18425 | tdcG | L-serine ammonia-lyase | low | > 80 |
| Escherichia coli BW25113 | 0.25 | b4077 | gltP | glutamate/aspartate:proton symporter (NCBI) | 0.53 | b4471 | tdcG | L-serine dehydratase 3 (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF1460 | | Glutamate-aspartate carrier protein | 0.52 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_4231 | | Na+/H+-dicarboxylate symporters | 0.54 | EX28DRAFT_0745 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 76 |
| Klebsiella michiganensis M5al | 0.24 | BWI76_RS02105 | | glutamate/aspartate:proton symporter GltP | 0.53 | BWI76_RS17875 | | L-serine ammonia-lyase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_00292 | | Proton/glutamate-aspartate symporter | 0.53 | MPMX20_02719 | | L-serine dehydratase 1 | low | > 85 |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS00460 | | glutamate/aspartate:proton symporter GltP | 0.65 | PFLU_RS24005 | | L-serine ammonia-lyase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_00470 | | glutamate:protein symporter | 0.65 | PS417_22365 | | serine dehydratase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS00460 | | glutamate/aspartate:proton symporter GltP | 0.65 | PFLU_RS24005 | | L-serine ammonia-lyase | 0.49 | 72 |
| Pseudomonas putida KT2440 | 0.24 | PP_0137 | | glutamate/aspartate-proton DAACS transporter | 0.67 | PP_0987 | | L-serine dehydratase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_0174 | | Sodium:dicarboxylate symporter | 0.58 | Psyr_3522 | | L-serine ammonia-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_0174 | | Sodium:dicarboxylate symporter | 0.58 | Psyr_3522 | | L-serine ammonia-lyase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_578 | | Glutamate-aspartate carrier protein | 0.66 | PfGW456L13_1867 | | L-serine dehydratase (EC 4.3.1.17) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_10990 | | glutamate:protein symporter | 0.66 | AO353_03505 | | serine dehydratase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_11400 | | glutamate:protein symporter | 0.66 | AO356_18165 | | serine dehydratase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_4148 | | Glutamate-aspartate carrier protein | 0.66 | Pf6N2E2_5557 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.23 | Pf1N1B4_1888 | | Glutamate-aspartate carrier protein | 0.66 | Pf1N1B4_622 | | L-serine dehydratase (EC 4.3.1.17) | low | > 87 |
| Pseudomonas sp. RS175 | 0.23 | PFR28_04638 | | Proton/glutamate-aspartate symporter | 0.66 | PFR28_03384 | | L-serine dehydratase 2 | low | > 88 |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_03595 | | C4-dicarboxylate transport protein 2 | 0.45 | MPMX19_04703 | | L-serine dehydratase TdcG | low | > 112 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.22 | ABZR88_RS07700 | | dicarboxylate/amino acid:cation symporter | 0.48 | ABZR88_RS18475 | | L-serine ammonia-lyase | low | > 71 |
| Agrobacterium fabrum C58 | 0.22 | Atu3298 | | C4-dicarboxylate transporter DctA | 0.49 | Atu1759 | | L-serine dehydratase | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS26130 | | C4-dicarboxylate ABC transporter | 0.62 | RR42_RS20080 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 128 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_00264 | | C4-dicarboxylate transport protein | 0.52 | CCNA_03206 | | L-serine dehydratase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_00264 | | C4-dicarboxylate transport protein | 0.52 | CCNA_03206 | | L-serine dehydratase | low | > 67 |
| Rhizobium sp. OAE497 | 0.21 | ABIE40_RS26345 | | dicarboxylate/amino acid:cation symporter | 0.50 | ABIE40_RS09785 | | L-serine ammonia-lyase | low | > 107 |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS02715 | | dicarboxylate/amino acid:cation symporter | 0.54 | ABCV34_RS14845 | | L-serine ammonia-lyase | low | > 48 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.21 | CA265_RS15560 | | glutamate/aspartate:proton symporter GltP | 0.47 | CA265_RS21785 | | L-serine ammonia-lyase | low | > 88 |
| Variovorax sp. SCN45 | 0.21 | GFF5354 | | C4-dicarboxylate transport protein | 0.52 | GFF3439 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 127 |
| Rahnella sp. WP5 | 0.21 | EX31_RS05445 | | dicarboxylate/amino acid:cation symporter | 0.54 | EX31_RS24715 | | L-serine ammonia-lyase | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_719 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.60 | Ac3H11_929 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 79 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_20585 | | Na+/H+-dicarboxylate symporter | 0.65 | OH686_16810 | | L-serine ammonia-lyase | low | > 80 |
| Sinorhizobium meliloti 1021 | 0.20 | SM_b20611 | | C4-dicarboxylate transporter DctA | 0.49 | SMc01256 | | L-serine dehydratase | low | > 103 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.19 | H281DRAFT_02039 | | aerobic C4-dicarboxylate transport protein | 0.62 | H281DRAFT_02407 | | L-serine ammonia-lyase | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS06625 | | dicarboxylate/amino acid:cation symporter | 0.60 | ABZR87_RS03940 | | L-serine ammonia-lyase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.19 | RALBFv3_RS10785 | | dicarboxylate/amino acid:cation symporter | 0.60 | RALBFv3_RS08665 | | L-serine ammonia-lyase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.19 | RS_RS01625 | | C4-dicarboxylate transporter 1 | 0.60 | RS_RS16515 | | L-serine ammonia-lyase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.19 | BPHYT_RS02510 | | C4-dicarboxylate ABC transporter | 0.62 | BPHYT_RS19340 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 109 |
| Ralstonia solanacearum UW163 | 0.19 | UW163_RS02795 | | dicarboxylate/amino acid:cation symporter | 0.60 | UW163_RS04945 | | L-serine ammonia-lyase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.19 | QEN71_RS26995 | | C4-dicarboxylate transporter DctA | 0.62 | QEN71_RS29225 | | L-serine ammonia-lyase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.19 | RPSI07_RS14855 | | dicarboxylate/amino acid:cation symporter | 0.62 | RPSI07_RS08570 | | L-serine ammonia-lyase | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.19 | ABIE53_004012 | | aerobic C4-dicarboxylate transport protein | 0.61 | ABIE53_000240 | | L-serine dehydratase | low | > 113 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_06560 | gltP | dicarboxylate/amino acid:cation symporter | 0.65 | OKGIIK_01565 | sdaA | L-serine ammonia-lyase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.18 | LRK54_RS00700 | | dicarboxylate/amino acid:cation symporter | 0.66 | LRK54_RS05255 | | L-serine ammonia-lyase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.18 | LRK55_RS00475 | | dicarboxylate/amino acid:cation symporter | 0.66 | LRK55_RS05035 | | L-serine ammonia-lyase | low | > 63 |
| Bacteroides ovatus ATCC 8483 | 0.09 | BACOVA_00510 | | transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein | 0.32 | BACOVA_05536 | | L-serine ammonia-lyase | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.08 | BT1223 | | Na+/H+-dicarboxylate symporter (NCBI ptt file) | 0.32 | BT4678 | | L-serine dehydratase (NCBI ptt file) | — | — |
Not shown: 10 genomes with orthologs for B158DRAFT_2215 only; 11 genomes with orthologs for B158DRAFT_1339 only