Conservation of cofitness between B158DRAFT_0244 and B158DRAFT_1124 in Kangiella aquimarina DSM 16071

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0244 tyrosine recombinase XerC subunit 1.0 B158DRAFT_1124 Holliday junction endonuclease RuvC (EC 3.1.22.4) 0.79 3
Shewanella amazonensis SB2B 0.48 Sama_3247 integrase/recombinase XerC (RefSeq) 0.49 Sama_1841 ruvC Holliday junction resolvase (RefSeq) — —
Klebsiella michiganensis M5al 0.48 BWI76_RS01210 tyrosine recombinase XerC 0.53 BWI76_RS18155 crossover junction endodeoxyribonuclease RuvC — —
Shewanella sp. ANA-3 0.47 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.54 Shewana3_1955 ruvC Holliday junction resolvase (RefSeq) — —
Marinobacter adhaerens HP15 0.47 HP15_250 site-specific tyrosine recombinase XerC 0.51 HP15_2042 crossover junction endodeoxyribonuclease RuvC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF239 Tyrosine recombinase XerC 0.52 GFF1644 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Shewanella oneidensis MR-1 0.47 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) 0.54 SO2431 ruvC crossover junction endodeoxyribonuclease RuvC (NCBI ptt file) low > 76
Rahnella sp. WP5 0.47 EX31_RS15165 tyrosine recombinase XerC 0.51 EX31_RS11680 crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli ECRC98 0.47 JDDGAC_18045 xerC tyrosine recombinase XerC 0.52 JDDGAC_00840 ruvC crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli ECRC102 0.47 NIAGMN_12175 xerC tyrosine recombinase XerC 0.52 NIAGMN_01795 ruvC crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli ECRC101 0.47 MCAODC_04925 xerC tyrosine recombinase XerC 0.52 MCAODC_19140 ruvC crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli ECRC99 0.47 KEDOAH_13730 xerC tyrosine recombinase XerC 0.52 KEDOAH_01840 ruvC crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli ECRC100 0.47 OKFHMN_14420 xerC tyrosine recombinase XerC 0.52 OKFHMN_26265 ruvC crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_04239 Tyrosine recombinase XerC 0.52 OHPLBJKB_01865 Crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli BL21 0.46 ECD_03687 site-specific tyrosine recombinase 0.52 ECD_01834 component of RuvABC resolvasome, endonuclease — —
Escherichia coli ECRC62 0.46 BNILDI_04985 xerC tyrosine recombinase XerC 0.52 BNILDI_15500 ruvC crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS21875 tyrosine recombinase XerC 0.52 ECOLIN_RS10375 crossover junction endodeoxyribonuclease RuvC — —
Escherichia coli ECOR38 0.46 HEPCGN_13125 xerC tyrosine recombinase XerC 0.52 HEPCGN_04675 ruvC crossover junction endodeoxyribonuclease RuvC low > 87
Escherichia coli BW25113 0.46 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.52 b1863 ruvC Holliday junction resolvase (NCBI) 0.50 23
Escherichia coli ECOR27 0.46 NOLOHH_06550 xerC tyrosine recombinase XerC 0.52 NOLOHH_16710 ruvC crossover junction endodeoxyribonuclease RuvC — —
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_00650 tyrosine recombinase XerC 0.60 CSW01_09250 crossover junction endodeoxyribonuclease RuvC low > 62
Escherichia fergusonii Becca 0.46 EFB2_04826 Tyrosine recombinase XerC 0.52 EFB2_02079 Crossover junction endodeoxyribonuclease RuvC — —
Shewanella loihica PV-4 0.46 Shew_0325 tyrosine recombinase XerC (RefSeq) 0.53 Shew_2077 crossover junction endodeoxyribonuclease RuvC (RefSeq) 0.29 18
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0185 tyrosine recombinase XerC subunit 0.47 Psyr_1408 Holliday junction endonuclease RuvC low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0185 tyrosine recombinase XerC subunit 0.47 Psyr_1408 Holliday junction endonuclease RuvC 0.27 30
Pseudomonas sp. S08-1 0.45 OH686_13785 tyrosine recombinase XerC 0.47 OH686_19125 crossover junction endodeoxyribonuclease RuvC low > 80
Enterobacter asburiae PDN3 0.45 EX28DRAFT_4480 tyrosine recombinase XerC 0.52 EX28DRAFT_0694 Holliday junction endonuclease RuvC (EC 3.1.22.4) — —
Serratia liquefaciens MT49 0.45 IAI46_00725 tyrosine recombinase XerC 0.49 IAI46_14630 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas stutzeri RCH2 0.45 Psest_3767 tyrosine recombinase XerC 0.48 Psest_1495 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas putida KT2440 0.44 PP_5230 Tyrosine recombinase XerC 0.42 PP_1215 Crossover junction endodeoxyribonuclease RuvC 0.46 4
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4416 Tyrosine recombinase XerC 0.47 Pf6N2E2_5535 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Enterobacter sp. TBS_079 0.44 MPMX20_04465 Tyrosine recombinase XerC 0.52 MPMX20_02768 Crossover junction endodeoxyribonuclease RuvC 0.45 10
Pseudomonas sp. RS175 0.44 PFR28_04378 Tyrosine recombinase XerC 0.47 PFR28_03414 Crossover junction endodeoxyribonuclease RuvC 0.38 17
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_12725 recombinase XerC 0.47 AO356_18015 crossover junction endodeoxyribonuclease RuvC — —
Pantoea sp. MT58 0.44 IAI47_18400 tyrosine recombinase XerC 0.53 IAI47_08440 crossover junction endodeoxyribonuclease RuvC low > 76
Pectobacterium carotovorum WPP14 0.44 HER17_RS01350 tyrosine recombinase XerC 0.46 HER17_RS11850 crossover junction endodeoxyribonuclease RuvC 0.80 4
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09050 recombinase XerC 0.47 AO353_03590 crossover junction endodeoxyribonuclease RuvC 0.34 19
Dickeya dadantii 3937 0.43 DDA3937_RS19890 tyrosine recombinase XerC 0.52 DDA3937_RS10070 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2171 Tyrosine recombinase XerC 0.48 Pf1N1B4_639 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Erwinia tracheiphila SCR3 0.43 LU632_RS24135 xerC tyrosine recombinase XerC 0.51 LU632_RS13420 ruvC crossover junction endodeoxyribonuclease RuvC — —
Dickeya dianthicola 67-19 0.43 HGI48_RS20045 tyrosine recombinase XerC 0.53 HGI48_RS10100 crossover junction endodeoxyribonuclease RuvC — —
Dickeya dianthicola ME23 0.43 DZA65_RS21090 tyrosine recombinase XerC 0.53 DZA65_RS10515 crossover junction endodeoxyribonuclease RuvC — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00157 Tyrosine recombinase XerC 0.52 MIT1002_01331 Crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas simiae WCS417 0.41 PS417_27595 recombinase XerC 0.48 PS417_22455 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS29280 tyrosine recombinase XerC 0.48 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS29280 tyrosine recombinase XerC 0.48 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC low > 109
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS15025 tyrosine recombinase XerC 0.41 ABZR86_RS10845 crossover junction endodeoxyribonuclease RuvC — —
Dechlorosoma suillum PS 0.39 Dsui_0651 tyrosine recombinase XerC 0.38 Dsui_0486 crossover junction endodeoxyribonuclease RuvC — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.35 Xcc-8004.1435.1 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Rhodanobacter denitrificans MT42 0.39 LRK55_RS08300 tyrosine recombinase XerC 0.38 LRK55_RS04695 crossover junction endodeoxyribonuclease RuvC — —
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS00355 tyrosine recombinase XerC 0.39 QEN71_RS26785 crossover junction endodeoxyribonuclease RuvC — —
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS01655 tyrosine recombinase XerC 0.40 BPHYT_RS16605 crossover junction endodeoxyribonuclease RuvC — —
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_02202 integrase/recombinase XerC 0.40 H281DRAFT_04253 Holliday junction endonuclease RuvC — —
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_15325 xerC tyrosine recombinase XerC 0.38 OKGIIK_01835 ruvC crossover junction endodeoxyribonuclease RuvC — —
Paraburkholderia graminis OAS925 0.38 ABIE53_000426 integrase/recombinase XerC 0.40 ABIE53_003493 crossover junction endodeoxyribonuclease RuvC — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS08535 tyrosine recombinase XerC 0.38 LRK54_RS04915 crossover junction endodeoxyribonuclease RuvC — —
Ralstonia solanacearum PSI07 0.38 RPSI07_RS23690 tyrosine recombinase XerC 0.39 RPSI07_RS21535 crossover junction endodeoxyribonuclease RuvC — —
Castellaniella sp019104865 MT123 0.37 ABCV34_RS13455 tyrosine recombinase XerC 0.30 ABCV34_RS07975 crossover junction endodeoxyribonuclease RuvC — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS09675 tyrosine recombinase XerC 0.39 RALBFv3_RS11680 crossover junction endodeoxyribonuclease RuvC — —
Ralstonia solanacearum UW163 0.37 UW163_RS03905 tyrosine recombinase XerC 0.39 UW163_RS01905 crossover junction endodeoxyribonuclease RuvC — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS05065 tyrosine recombinase XerC 0.39 ABZR87_RS07635 crossover junction endodeoxyribonuclease RuvC low > 80
Ralstonia solanacearum GMI1000 0.36 RS_RS00260 Tyrosine recombinase XerC 1 0.39 RS_RS02500 crossover junction endodeoxyribonuclease RuvC — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS21475 recombinase XerC 0.39 HSERO_RS02080 Holliday junction resolvase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF547 Tyrosine recombinase XerC 0.34 GFF572 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Variovorax sp. OAS795 0.34 ABID97_RS06150 tyrosine recombinase XerC 0.37 ABID97_RS06275 crossover junction endodeoxyribonuclease RuvC 0.52 32
Acinetobacter radioresistens SK82 0.34 MPMX26_02230 Tyrosine recombinase XerC 0.43 MPMX26_01780 Crossover junction endodeoxyribonuclease RuvC — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1995 Tyrosine recombinase XerC 0.39 Ac3H11_4050 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Variovorax sp. SCN45 0.34 GFF4490 Site-specific tyrosine recombinase XerC 0.37 GFF4462 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) low > 127
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS00615 recombinase XerC 0.41 RR42_RS02715 Holliday junction DNA helicase — —
Sinorhizobium meliloti 1021 0.27 SMc02489 site-specific tyrosine recombinase XerC 0.30 SMc03967 Holliday junction resolvase — —
Agrobacterium fabrum C58 0.26 Atu2628 site-specific recombinase 0.30 Atu3724 Holliday junction resolvase — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c05760 putative tyrosine recombinase XerC 0.29 PGA1_c05850 crossover junction endodeoxyribonuclease RuvC — —
Rhizobium sp. OAE497 0.25 ABIE40_RS17950 tyrosine recombinase XerC 0.31 ABIE40_RS15730 crossover junction endodeoxyribonuclease RuvC low > 107
Bosea sp. OAE506 0.24 ABIE41_RS07870 tyrosine recombinase XerC 0.31 ABIE41_RS09470 crossover junction endodeoxyribonuclease RuvC 0.71 2
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_2764 Site-specific recombinase XerD 0.22 Ga0059261_0822 Holliday junction endonuclease RuvC (EC 3.1.22.4) — —

Not shown: 4 genomes with orthologs for B158DRAFT_0244 only; 14 genomes with orthologs for B158DRAFT_1124 only