Conservation of cofitness between Atu0533 and Atu1499 in Agrobacterium fabrum C58

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0533 putative inhibitor of septum formation 1.0 Atu1499 penicillin binding protein 0.47 11
Rhizobium sp. OAE497 0.77 ABIE40_RS02745 Maf-like protein 0.53 ABIE40_RS09505 D-alanyl-D-alanine carboxypeptidase family protein 0.57 7
Sinorhizobium meliloti 1021 0.71 SMc02311 Maf-like protein 0.55 SMc01188 penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein — —
Rhodopseudomonas palustris CGA009 0.61 TX73_023520 Maf-like protein 0.37 TX73_014370 D-alanyl-D-alanine carboxypeptidase — —
Bosea sp. OAE506 0.59 ABIE41_RS20815 Maf-like protein 0.36 ABIE41_RS15965 D-alanyl-D-alanine carboxypeptidase family protein — —
Magnetospirillum magneticum AMB-1 0.44 AMB_RS16885 septum formation inhibitor Maf 0.28 AMB_RS12315 D-alanyl-D-alanine carboxypeptidase — —
Rhodospirillum rubrum S1H 0.42 Rru_A2768 Maf-like protein (NCBI) 0.30 Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) — —
Azospirillum sp. SherDot2 0.42 MPMX19_05536 dTTP/UTP pyrophosphatase 0.29 MPMX19_01465 D-alanyl-D-alanine carboxypeptidase DacC — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS19535 septum formation protein Maf 0.30 AZOBR_RS08775 D-alanyl-D-alanine carboxypeptidase — —
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1909 MAF protein 0.26 Ga0059261_0122 D-alanyl-D-alanine carboxypeptidase — —
Phaeobacter inhibens DSM 17395 0.41 PGA1_c31120 MAF protein 0.27 PGA1_c08020 D-alanyl-D-alanine carboxypeptidase DacC — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_0983 maf protein (RefSeq) 0.26 Dshi_0923 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) — —
Marinobacter adhaerens HP15 0.36 HP15_2452 Maf-like protein 0.25 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00223 Maf-like protein YhdE 0.23 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_5030 Septum formation protein Maf 0.25 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Shewanella sp. ANA-3 0.34 Shewana3_3645 maf protein (RefSeq) 0.22 Shewana3_0991 penicillin-binding protein 6 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO4095 maf maf protein (NCBI ptt file) 0.22 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) — —
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_05235 septum formation protein Maf 0.26 AO353_06455 D-alanyl-D-alanine carboxypeptidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3284 Septum formation protein Maf 0.25 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1096 Septum formation protein Maf 0.25 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas sp. RS175 0.33 PFR28_00157 dTTP/UTP pyrophosphatase 0.26 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC low > 88
Acinetobacter radioresistens SK82 0.32 MPMX26_00645 dTTP/UTP pyrophosphatase 0.23 MPMX26_01051 D-alanyl-D-alanine carboxypeptidase DacA low > 36
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4160 Maf-like protein 0.25 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4160 Maf-like protein 0.25 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_2068 MAF protein 0.25 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3298 MAF protein 0.21 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase low > 76
Pseudomonas putida KT2440 0.31 PP_0936 septum formation protein 0.26 PP_4803 D-alanyl-D-alanine carboxypeptidase low > 96
Pseudomonas simiae WCS417 0.31 PS417_04265 septum formation protein Maf 0.25 PS417_24705 D-alanyl-D-alanine carboxypeptidase low > 88
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.1879.1 Septum formation protein Maf 0.20 Xcc-8004.907.1 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 74
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_07115 septum formation protein Maf 0.25 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS04320 septum formation inhibitor Maf 0.26 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Acidovorax sp. GW101-3H11 0.31 Ac3H11_2417 Septum formation protein Maf 0.23 Ac3H11_2142 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS04320 septum formation inhibitor Maf 0.26 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase 0.46 109
Enterobacter sp. TBS_079 0.30 MPMX20_04154 dTTP/UTP pyrophosphatase 0.21 MPMX20_02996 D-alanyl-D-alanine carboxypeptidase DacD low > 85
Escherichia coli ECRC101 0.30 OKFHMN_17740 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 OKFHMN_25015 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Escherichia coli ECRC98 0.30 JDDGAC_21365 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 JDDGAC_29140 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Escherichia coli ECRC99 0.30 KEDOAH_10410 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 KEDOAH_03100 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Escherichia coli ECRC102 0.30 NIAGMN_15500 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 NIAGMN_22515 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Serratia liquefaciens MT49 0.30 IAI46_22705 septum formation inhibitor Maf 0.23 IAI46_13850 serine-type D-Ala-D-Ala carboxypeptidase DacD low > 86
Escherichia coli ECRC62 0.30 BNILDI_01995 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 BNILDI_14795 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Pantoea sp. MT58 0.30 IAI47_02450 septum formation inhibitor Maf 0.22 IAI47_07170 serine-type D-Ala-D-Ala carboxypeptidase DacD low > 76
Klebsiella michiganensis M5al 0.30 BWI76_RS25485 septum formation protein Maf 0.21 BWI76_RS18780 D-alanyl-D-alanine carboxypeptidase low > 92
Escherichia coli ECOR27 0.30 NOLOHH_09525 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 NOLOHH_15895 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD low > 57
Pseudomonas stutzeri RCH2 0.30 Psest_3324 MAF protein 0.26 Psest_0516 D-alanyl-D-alanine carboxypeptidase low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF2137 Septum formation protein Maf 0.21 GFF3923 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 78
Escherichia coli ECOR38 0.30 HEPCGN_16605 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 HEPCGN_03275 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD low > 85
Escherichia fergusonii Becca 0.30 EFB2_00583 dTTP/UTP pyrophosphatase 0.21 EFB2_01846 D-alanyl-D-alanine carboxypeptidase DacD low > 86
Escherichia coli Nissle 1917 0.30 ECOLIN_RS18610 nucleoside triphosphate pyrophosphatase YhdE 0.21 ECOLIN_RS11905 serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Escherichia coli ECRC101 0.30 MCAODC_08260 yhdE nucleoside triphosphate pyrophosphatase YhdE 0.21 MCAODC_20370 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD — —
Escherichia coli BW25113 0.29 b3248 yhdE Maf-like protein (NCBI) 0.21 b2010 dacD penicillin binding protein 6b (VIMSS) low > 76
Escherichia coli BL21 0.29 ECD_03107 dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase 0.21 ECD_01913 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6b low > 60
Ralstonia solanacearum UW163 0.29 UW163_RS10100 septum formation inhibitor Maf 0.21 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_00457 Maf-like protein YhdE 0.21 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC low > 73
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS03570 septum formation inhibitor Maf 0.21 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase 0.44 16
Pseudomonas sp. S08-1 0.29 OH686_08600 septum formation protein Maf 0.28 OH686_09300 D-alanyl-D-alanine carboxypeptidase low > 80
Dechlorosoma suillum PS 0.29 Dsui_0450 MAF protein 0.26 Dsui_0899 D-alanyl-D-alanine carboxypeptidase low > 51
Pectobacterium carotovorum WPP14 0.29 HER17_RS20155 Maf-like protein 0.20 HER17_RS15260 D-alanyl-D-alanine carboxypeptidase DacA low > 75
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS15435 Maf family protein 0.22 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_02200 septum formation inhibitor Maf 0.22 CSW01_04845 D-alanyl-D-alanine carboxypeptidase low > 62
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS04705 septum formation inhibitor Maf 0.22 RR42_RS01680 cytochrome C550 low > 128
Ralstonia solanacearum PSI07 0.29 RPSI07_RS13655 septum formation inhibitor Maf 0.22 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase low > 81
Ralstonia solanacearum GMI1000 0.28 RS_RS11020 septum formation inhibitor Maf 0.22 RS_RS01610 D-alanyl-D-alanine carboxypeptidase low > 80
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS17785 septum formation inhibitor Maf 0.22 HSERO_RS21530 cytochrome C550 low > 78
Lysobacter sp. OAE881 0.28 ABIE51_RS06780 Maf family nucleotide pyrophosphatase 0.20 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein low > 62
Rhodanobacter denitrificans MT42 0.28 LRK55_RS02440 Maf family protein 0.23 LRK55_RS06235 D-alanyl-D-alanine carboxypeptidase family protein — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS02685 Maf family nucleotide pyrophosphatase 0.23 LRK54_RS06490 D-alanyl-D-alanine carboxypeptidase low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF4530 Septum formation protein Maf 0.22 GFF1806 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 90
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_04516 septum formation protein 0.23 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 low > 103
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS06380 septum formation protein Maf 0.23 BPHYT_RS02415 cytochrome C550 low > 109
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS24425 Maf family protein 0.24 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein low > 153
Dickeya dadantii 3937 0.25 DDA3937_RS01445 septum formation inhibitor Maf 0.21 DDA3937_RS09420 serine hydrolase low > 74
Rahnella sp. WP5 0.24 EX31_RS12250 septum formation inhibitor Maf 0.22 EX31_RS07145 serine hydrolase low > 89
Dickeya dianthicola 67-19 0.24 HGI48_RS01365 septum formation inhibitor Maf 0.21 HGI48_RS09435 serine hydrolase low > 71
Dickeya dianthicola ME23 0.24 DZA65_RS01425 septum formation inhibitor Maf 0.20 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase low > 75

Not shown: 25 genomes with orthologs for Atu0533 only; 2 genomes with orthologs for Atu1499 only