Conservation of cofitness between A4249_RS13125 and A4249_RS06105 in Brevundimonas sp. GW460-12-10-14-LB2

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS13125 ribonuclease PH 1.0 A4249_RS06105 cytochrome b 0.64 4
Dinoroseobacter shibae DFL-12 0.66 Dshi_3463 ribonuclease PH (RefSeq) 0.24 Dshi_2495 cytochrome B561 (RefSeq) low > 64
Magnetospirillum magneticum AMB-1 0.65 AMB_RS22760 ribonuclease PH 0.30 AMB_RS18835 cytochrome b low > 64
Rhodospirillum rubrum S1H 0.65 Rru_A3641 Ribonuclease PH (NCBI) 0.32 Rru_A3682 Cytochrome B561 (NCBI) low > 58
Azospirillum sp. SherDot2 0.64 MPMX19_02576 Ribonuclease PH 0.17 MPMX19_00292 Cytochrome b561 low > 112
Bosea sp. OAE506 0.63 ABIE41_RS03295 ribonuclease PH 0.16 ABIE41_RS11040 cytochrome b/b6 domain-containing protein low > 77
Rhodopseudomonas palustris CGA009 0.63 TX73_001710 ribonuclease PH 0.25 TX73_002630 cytochrome b low > 86
Azospirillum brasilense Sp245 0.63 AZOBR_RS02205 ribonuclease PH 0.22 AZOBR_RS21975 hypothetical protein low > 97
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS15255 ribonuclease PH 0.28 ABZR87_RS01310 cytochrome b low > 80
Dechlorosoma suillum PS 0.59 Dsui_0494 ribonuclease PH 0.25 Dsui_2355 cytochrome B561 low > 51
Castellaniella sp019104865 MT123 0.58 ABCV34_RS03515 ribonuclease PH 0.28 ABCV34_RS06055 cytochrome b low > 48
Ralstonia solanacearum GMI1000 0.58 RS_RS10830 ribonuclease PH 0.26 RS_RS13605 cytochrome b — —
Variovorax sp. SCN45 0.58 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.24 GFF695 Cytochrome B561 low > 127
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13840 ribonuclease PH 0.27 RPSI07_RS11585 cytochrome b — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.26 Xcc-8004.1605.1 Cytochrome B561 low > 74
Alteromonas macleodii MIT1002 0.58 MIT1002_04071 Ribonuclease PH 0.18 MIT1002_01353 hypothetical protein low > 70
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11900 ribonuclease PH 0.25 ABZR86_RS19080 cytochrome b low > 74
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_2741 ribonuclease PH 0.33 Ga0059261_1967 Cytochrome B561 — —
Ralstonia solanacearum UW163 0.58 UW163_RS10375 ribonuclease PH 0.27 UW163_RS07910 cytochrome b — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS03345 ribonuclease PH 0.27 RALBFv3_RS05715 cytochrome b low > 76
Variovorax sp. OAS795 0.57 ABID97_RS23640 ribonuclease PH 0.20 ABID97_RS04800 cytochrome b/b6 domain-containing protein low > 91
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS03645 ribonuclease PH 0.28 QEN71_RS16270 cytochrome b low > 153
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04008 RNAse PH 0.32 H281DRAFT_01400 cytochrome b561 low > 103
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS15325 ribonuclease PH 0.32 BPHYT_RS35055 cytochrome B561 low > 109
Shewanella loihica PV-4 0.56 Shew_3488 ribonuclease PH (RefSeq) 0.24 Shew_1120 cytochrome B561 (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.26 Ac3H11_3548 Cytochrome B561 0.38 22
Paraburkholderia graminis OAS925 0.56 ABIE53_003234 ribonuclease PH 0.31 ABIE53_004605 cytochrome b561 low > 113
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS04890 ribonuclease PH 0.18 RR42_RS04290 cytochrome B561 low > 128
Marinobacter adhaerens HP15 0.56 HP15_300 ribonuclease PH 0.19 HP15_2524 inner membrane protein low > 73
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS10655 ribonuclease PH 0.28 HSERO_RS03420 cytochrome B561 low > 78
Acinetobacter radioresistens SK82 0.55 MPMX26_00040 Ribonuclease PH 0.24 MPMX26_01603 Cytochrome b561 — —
Lysobacter sp. OAE881 0.55 ABIE51_RS17285 ribonuclease PH 0.20 ABIE51_RS16125 cytochrome b low > 62
Rhodanobacter denitrificans MT42 0.55 LRK55_RS11470 ribonuclease PH 0.31 LRK55_RS05015 cytochrome b low > 63
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS11745 ribonuclease PH 0.31 LRK54_RS05235 cytochrome b low > 59
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0588 ribonuclease PH 0.22 B158DRAFT_1942 Cytochrome B561 low > 40
Pseudomonas sp. S08-1 0.54 OH686_13570 ribonuclease PH 0.26 OH686_10845 Cytochrome b561-related 2 low > 80
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_12150 rph ribonuclease PH 0.29 OKGIIK_01590 cytochrome B — —
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_01115 ribonuclease PH 0.27 CSW01_15215 cytochrome b low > 62
Escherichia coli Nissle 1917 0.53 ECOLIN_RS20755 ribonuclease PH 0.23 ECOLIN_RS06135 cytochrome b — —
Escherichia coli ECOR38 0.53 HEPCGN_14410 rph ribonuclease PH 0.21 HEPCGN_23735 yceJ Cytochrome b561-like protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00059 Ribonuclease PH 0.22 OHPLBJKB_02608 Cytochrome b561 low > 73
Escherichia coli ECRC99 0.53 KEDOAH_12555 rph ribonuclease PH 0.22 KEDOAH_24000 yceJ Cytochrome b561-like protein — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_0213 RNAse PH 0.25 Psyr_0456 Cytochrome B561, bacterial low > 86
Escherichia coli ECRC100 0.53 OKFHMN_15590 rph ribonuclease PH 0.22 OKFHMN_03755 yceJ Cytochrome b561-like protein low > 80
Escherichia coli ECRC102 0.53 NIAGMN_13350 rph ribonuclease PH 0.22 NIAGMN_24075 yceJ Cytochrome b561-like protein — —
Escherichia fergusonii Becca 0.53 EFB2_00170 Ribonuclease PH 0.22 EFB2_02917 Cytochrome b561 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.19 GFF3336 Cytochrome B561 low > 78
Escherichia coli ECRC98 0.53 JDDGAC_19215 rph ribonuclease PH 0.22 JDDGAC_07415 yceJ Cytochrome b561-like protein low > 86
Escherichia coli BL21 0.53 ECD_03500 ribonuclease PH 0.23 ECD_01053 putative cytochrome b561 low > 61
Escherichia coli ECOR27 0.53 NOLOHH_07470 rph ribonuclease PH 0.22 NOLOHH_21285 yceJ Cytochrome b561-like protein low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_0213 RNAse PH 0.25 Psyr_0456 Cytochrome B561, bacterial low > 86
Escherichia coli ECRC101 0.53 MCAODC_06100 rph ribonuclease PH 0.22 MCAODC_23115 yceJ Cytochrome b561-like protein low > 87
Pseudomonas simiae WCS417 0.53 PS417_27810 ribonuclease PH 0.25 PS417_26535 cytochrome B561 low > 88
Pseudomonas fluorescens SBW25 0.53 PFLU_RS29490 ribonuclease PH 0.25 PFLU_RS28190 cytochrome b low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS29490 ribonuclease PH 0.25 PFLU_RS28190 cytochrome b low > 109
Escherichia coli ECRC62 0.53 BNILDI_04045 rph ribonuclease PH 0.22 BNILDI_19445 yceJ Cytochrome b561-like protein low > 75
Pseudomonas stutzeri RCH2 0.53 Psest_3813 ribonuclease PH 0.26 Psest_0307 Cytochrome B561 0.26 6
Dickeya dadantii 3937 0.53 DDA3937_RS20540 ribonuclease PH 0.20 DDA3937_RS13185 cytochrome b low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS00675 ribonuclease PH 0.21 HGI48_RS13250 cytochrome b low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS00730 ribonuclease PH 0.21 DZA65_RS13725 cytochrome b low > 75
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.25 Pf1N1B4_2380 Cytochrome B561 0.36 65
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3893 ribonuclease PH 0.22 EX28DRAFT_1874 Cytochrome B561 low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_00092 Ribonuclease PH 0.23 MPMX20_01737 Cytochrome b561 low > 85
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.25 Pf6N2E2_4633 Cytochrome B561 low > 103
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.24 PfGW456L13_2569 cytochrome b(561) low > 87
Klebsiella michiganensis M5al 0.52 BWI76_RS27390 ribonuclease PH 0.17 BWI76_RS13250 cytochrome b561 low > 92
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_12500 ribonuclease PH 0.24 AO356_13580 cytochrome B low > 104
Pantoea sp. MT58 0.52 IAI47_00595 ribonuclease PH 0.18 IAI47_12240 cytochrome b low > 76
Pseudomonas sp. RS175 0.52 PFR28_04420 Ribonuclease PH 0.25 PFR28_04206 Cytochrome b561 low > 88
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_09260 ribonuclease PH 0.31 AO353_29080 cytochrome B low > 101
Erwinia tracheiphila SCR3 0.52 LU632_RS22020 rph ribonuclease PH 0.18 LU632_RS10310 cytochrome b low > 74
Rahnella sp. WP5 0.52 EX31_RS14505 ribonuclease PH 0.25 EX31_RS20010 cytochrome b low > 89
Serratia liquefaciens MT49 0.52 IAI46_24850 ribonuclease PH 0.22 IAI46_09695 cytochrome b low > 86
Escherichia coli BW25113 0.51 b3643 rph ribonuclease PH (NCBI) 0.23 b1057 yceJ predicted cytochrome b561 (NCBI) low > 76
Pseudomonas putida KT2440 0.51 PP_5294 Ribonuclease PH 0.26 PP_4982 putative cytochrome b561, iron-regulated low > 96
Pectobacterium carotovorum WPP14 0.51 HER17_RS20855 ribonuclease PH 0.21 HER17_RS08580 cytochrome b low > 75

Not shown: 13 genomes with orthologs for A4249_RS13125 only; 0 genomes with orthologs for A4249_RS06105 only