Conservation of cofitness between Sama_2838 and Sama_1508 in Shewanella amazonensis SB2B

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2838 sulfite reductase subunit beta (RefSeq) 1.0 Sama_1508 cysteine synthase A (RefSeq) 0.96 14
Alteromonas macleodii MIT1002 0.78 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component 0.72 MIT1002_02237 Cysteine synthase A
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.77 CSW01_04945 cysteine synthase A low > 62
Erwinia tracheiphila SCR3 0.74 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 LU632_RS06625 cysK cysteine synthase A 0.86 22
Dickeya dadantii 3937 0.74 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.74 DDA3937_RS04490 cysteine synthase A 0.88 20
Pantoea sp. MT58 0.74 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 IAI47_05440 cysteine synthase A 0.83 50
Rahnella sp. WP5 0.74 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.74 EX31_RS20175 cysteine synthase A 0.97 7
Pectobacterium carotovorum WPP14 0.73 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.74 HER17_RS17170 cysteine synthase A 0.88 56
Dickeya dianthicola ME23 0.73 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 DZA65_RS04370 cysteine synthase A 0.73 17
Serratia liquefaciens MT49 0.73 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.74 IAI46_18445 cysteine synthase A 0.75 12
Dickeya dianthicola 67-19 0.73 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 HGI48_RS04450 cysteine synthase A 0.86 29
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component 0.73 EX28DRAFT_0214 cysteine synthase A 0.69 44
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component 0.73 OHPLBJKB_01309 Cysteine synthase A low > 73
Enterobacter sp. TBS_079 0.72 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.73 MPMX20_03308 Cysteine synthase A 0.73 7
Escherichia coli Nissle 1917 0.72 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 ECOLIN_RS13870 cysteine synthase A low > 52
Escherichia coli ECRC98 0.72 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 JDDGAC_26150 cysK cysteine synthase A
Escherichia coli ECOR27 0.72 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 NOLOHH_13880 cysK cysteine synthase A low > 57
Escherichia coli ECRC101 0.72 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 OKFHMN_22200 cysK cysteine synthase A
Escherichia fergusonii Becca 0.72 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component 0.73 EFB2_01462 Cysteine synthase A low > 86
Escherichia coli ECRC102 0.72 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 NIAGMN_19970 cysK cysteine synthase A
Escherichia coli ECRC99 0.72 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 KEDOAH_06020 cysK cysteine synthase A
Escherichia coli ECRC62 0.72 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.74 BNILDI_12745 cysK cysteine synthase A
Escherichia coli ECRC101 0.72 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 MCAODC_12730 cysK cysteine synthase A
Escherichia coli BL21 0.71 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 0.73 ECD_02314 cysteine synthase A, O-acetylserine sulfhydrolase A subunit low > 60
Escherichia coli BW25113 0.71 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 0.73 b2414 cysK cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) 0.95 5
Escherichia coli ECOR38 0.71 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.74 HEPCGN_21380 cysK cysteine synthase A low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.73 GFF2044 Cysteine synthase (EC 2.5.1.47) low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS22760 sulfite reductase subunit beta 0.73 BWI76_RS20640 cysteine synthase A 0.69 68
Shewanella sp. ANA-3 0.60 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.90 Shewana3_1561 cysteine synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.60 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) 0.90 SO2903 cysK cysteine synthase A (NCBI ptt file) 0.92 48
Shewanella loihica PV-4 0.58 Shew_0666 sulfite reductase subunit beta (RefSeq) 0.87 Shew_2382 cysteine synthase A (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS05900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.29 ABZR86_RS05875 cysteine synthase A 0.96 13
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2161 sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) 0.28 B158DRAFT_2456 cysteine synthase A 0.56 1
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.30 OKGIIK_05985 cysK cysteine synthase A low > 52
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.31 LRK54_RS00905 cysteine synthase A 0.66 6
Lysobacter sp. OAE881 0.47 ABIE51_RS15830 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.31 ABIE51_RS15860 cysteine synthase A low > 62
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.30 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.82 14
Castellaniella sp019104865 MT123 0.46 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.27 ABCV34_RS07055 cysteine synthase CysM
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0019 sir Sulfite reductase, ferredoxin dependent 0.64 Synpcc7942_B2664 srpG cysteine synthase
Herbaspirillum seropedicae SmR1 0.10 HSERO_RS15550 sulfite reductase 0.31 HSERO_RS04915 cysteine synthase
Mycobacterium tuberculosis H37Rv 0.10 Rv2391 Ferredoxin-dependent sulfite reductase SirA 0.48 Rv2334 Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A)
Rhodopseudomonas palustris CGA009 0.09 TX73_021840 nitrite/sulfite reductase 0.43 TX73_002885 cysteine synthase A low > 86
Rhodospirillum rubrum S1H 0.09 Rru_A1931 Ferredoxin--nitrite reductase (NCBI) 0.48 Rru_A3794 Cysteine synthase (NCBI)
Caulobacter crescentus NA1000 0.09 CCNA_01177 sulfite reductase, beta subunit 0.41 CCNA_03740 cysteine synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.09 CCNA_01177 sulfite reductase, beta subunit 0.41 CCNA_03740 cysteine synthase low > 67
Sphingomonas koreensis DSMZ 15582 0.09 Ga0059261_1498 Sulfite reductase, beta subunit (hemoprotein) 0.38 Ga0059261_3644 cysteine synthase A low > 68
Azospirillum sp. SherDot2 0.09 MPMX19_00652 Sulfite reductase [ferredoxin] 0.42 MPMX19_00237 Cysteine synthase low > 112
Pseudomonas fluorescens FW300-N2E3 0.09 AO353_22865 sulfite reductase 0.66 AO353_18020 cysteine synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.08 Pf1N1B4_4656 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.65 Pf1N1B4_3374 Cysteine synthase (EC 2.5.1.47) low > 87
Phaeobacter inhibens DSM 17395 0.08 PGA1_c20760 putative nitrite/sulfite reductase 0.25 PGA1_c13950 cysteine synthase CysK
Pseudomonas fluorescens GW456-L13 0.08 PfGW456L13_3285 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.66 PfGW456L13_4472 Cysteine synthase (EC 2.5.1.47) low > 87
Dinoroseobacter shibae DFL-12 0.08 Dshi_1153 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) 0.27 Dshi_0891 cysteine synthase A (RefSeq)
Ralstonia sp. UNC404CL21Col 0.08 ABZR87_RS00210 nitrite/sulfite reductase 0.32 ABZR87_RS09515 cysteine synthase CysM low > 80
Ralstonia solanacearum IBSBF1503 0.08 RALBFv3_RS04600 sulfite reductase 0.32 RALBFv3_RS13825 cysteine synthase CysM
Ralstonia solanacearum UW163 0.08 UW163_RS09070 sulfite reductase 0.32 UW163_RS15985 cysteine synthase CysM
Ralstonia solanacearum GMI1000 0.08 RS_RS12170 nitrite/sulfite reductase 0.33 RS_RS04560 cysteine synthase CysM
Azospirillum brasilense Sp245 0.08 AZOBR_RS10125 sulfite reductase 0.44 AZOBR_RS01080 cysteine synthase
Ralstonia solanacearum PSI07 0.08 RPSI07_RS12775 nitrite/sulfite reductase 0.32 RPSI07_RS19645 cysteine synthase CysM
Paraburkholderia bryophila 376MFSha3.1 0.08 H281DRAFT_00114 sulfite reductase (NADPH) beta subunit 0.32 H281DRAFT_03911 cysteine synthase
Paraburkholderia sabiae LMG 24235 0.08 QEN71_RS36875 nitrite/sulfite reductase 0.31 QEN71_RS04135 cysteine synthase CysM
Bosea sp. OAE506 0.08 ABIE41_RS15335 nitrite/sulfite reductase 0.44 ABIE41_RS03545 cysteine synthase A 0.59 12
Sinorhizobium meliloti 1021 0.07 SMc02124 nitrite reductase 0.46 SMc00421 O-acetylserine sulfhydrylase A low > 103
Burkholderia phytofirmans PsJN 0.07 BPHYT_RS22415 nitrite reductase 0.31 BPHYT_RS14845 cysteine synthase low > 109
Pseudomonas sp. S08-1 0.07 OH686_03470 Sulfite reductase [NADPH] hemoprotein beta-component 0.67 OH686_05215 cysteine synthase A low > 80
Pseudomonas putida KT2440 0.07 PP_2371 Sulphite reductase hemoprotein, beta subunit 0.66 PP_4571 cysteine synthase A low > 96
Pseudomonas syringae pv. syringae B728a 0.07 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region 0.63 Psyr_1583 cysteine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.07 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region 0.63 Psyr_1583 cysteine synthase low > 86
Pseudomonas fluorescens FW300-N2E2 0.07 Pf6N2E2_2073 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.65 Pf6N2E2_2700 Cysteine synthase (EC 2.5.1.47) low > 103
Pseudomonas sp. RS175 0.06 PFR28_01366 Sulfite reductase [ferredoxin] 0.65 PFR28_00734 Cysteine synthase A low > 88
Agrobacterium fabrum C58 0.06 Atu1456 sulfite reductase (NADPH) hemoprotein beta-component 0.45 Atu0312 cysteine synthase low > 89
Pseudomonas simiae WCS417 0.06 PS417_12290 sulfite reductase 0.65 PS417_07505 cysteine synthase low > 88
Variovorax sp. SCN45 0.06 GFF1206 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.40 GFF4549 Cysteine synthase (EC 2.5.1.47) low > 127
Pseudomonas stutzeri RCH2 0.06 Psest_2089 Sulfite reductase, beta subunit (hemoprotein) 0.63 Psest_1855 cysteine synthase A

Not shown: 1 genomes with orthologs for Sama_2838 only; 26 genomes with orthologs for Sama_1508 only