Conservation of cofitness between Shew_2749 and Shew_3757 in Shewanella loihica PV-4

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2749 two component transcriptional regulator (RefSeq) 1.0 Shew_3757 urocanate hydratase (RefSeq) 0.42 8
Shewanella oneidensis MR-1 0.89 SO1558 phoB phosphate regulon response regulator PhoB (NCBI ptt file) 0.90 SO0097 hutU urocanate hydratase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.87 Sama_1074 response regulator receiver protein (RefSeq) 0.26 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Shewanella sp. ANA-3 0.87 Shewana3_2879 two component transcriptional regulator (RefSeq) 0.90 Shewana3_0100 urocanate hydratase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_03760 phosphate regulon transcriptional regulatory protein PhoB 0.82 CSW01_06085 urocanate hydratase low > 62
Rahnella sp. WP5 0.75 EX31_RS22040 phosphate response regulator transcription factor PhoB 0.74 EX31_RS06760 urocanate hydratase low > 89
Escherichia coli ECOR38 0.74 HEPCGN_07185 phoB phosphate response regulator transcription factor PhoB 0.71 HEPCGN_01335 hutU urocanate hydratase low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2575 phosphate regulon transcriptional regulatory protein PhoB 0.75 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_00986 Phosphate regulon transcriptional regulatory protein PhoB 0.75 MPMX20_01399 Urocanate hydratase low > 85
Alteromonas macleodii MIT1002 0.74 MIT1002_00751 Phosphate regulon transcriptional regulatory protein PhoB 0.81 MIT1002_00904 Urocanate hydratase low > 70
Serratia liquefaciens MT49 0.74 IAI46_04775 phosphate response regulator transcription factor PhoB 0.77 IAI46_03665 urocanate hydratase low > 86
Klebsiella michiganensis M5al 0.73 BWI76_RS06230 DNA-binding response regulator 0.75 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) low > 92
Dickeya dianthicola 67-19 0.73 HGI48_RS05485 phosphate response regulator transcription factor PhoB 0.72 HGI48_RS15085 urocanate hydratase low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS05810 phosphate response regulator transcription factor PhoB 0.71 DZA65_RS15830 urocanate hydratase low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS05425 phosphate response regulator transcription factor PhoB 0.73 DDA3937_RS14990 urocanate hydratase low > 74
Pantoea sp. MT58 0.71 IAI47_14855 phosphate response regulator transcription factor PhoB 0.74 IAI47_13280 urocanate hydratase low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_5032 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.76 Psyr_4828 urocanate hydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_5032 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.76 Psyr_4828 urocanate hydratase low > 86
Pseudomonas simiae WCS417 0.61 PS417_28035 transcriptional regulator PhoB 0.77 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) low > 88
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_2044 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.77 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_4066 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.77 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Pseudomonas sp. RS175 0.61 PFR28_04479 Phosphate regulon transcriptional regulatory protein PhoB 0.78 PFR28_04965 Urocanate hydratase low > 88
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_11000 phosphate regulon transcriptional regulatory protein PhoB 0.77 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_09855 phosphate regulon transcriptional regulatory protein PhoB 0.77 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) low > 101
Pseudomonas fluorescens SBW25 0.61 PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB 0.77 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB 0.77 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_762 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.76 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) low > 87
Pseudomonas putida KT2440 0.61 PP_5320 two-component system DNA-binding transcriptional dual response regulator PhoB 0.77 PP_5033 Urocanate hydratase low > 96
Pseudomonas sp. S08-1 0.61 OH686_13465 phosphate regulon transcriptional regulatory protein PhoB 0.77 OH686_16745 urocanate hydratase low > 80
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS04845 phosphate regulon transcriptional regulator PhoB 0.78 QEN71_RS23505 urocanate hydratase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_04416 two component transcriptional regulator, winged helix family 0.78 H281DRAFT_04871 urocanate hydratase 0.32 91
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS14120 chemotaxis protein CheY 0.78 BPHYT_RS07565 urocanate hydratase low > 109
Paraburkholderia graminis OAS925 0.58 ABIE53_002990 two-component system phosphate regulon response regulator PhoB 0.78 ABIE53_001731 urocanate hydratase low > 113
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS02125 phosphate regulon transcriptional regulatory protein PhoB 0.70 RALBFv3_RS05395 urocanate hydratase low > 76
Ralstonia solanacearum UW163 0.57 UW163_RS15435 phosphate regulon transcriptional regulatory protein PhoB 0.70 UW163_RS08230 urocanate hydratase — —
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS13445 chemotaxis protein CheY 0.76 RR42_RS14645 urocanate hydratase low > 128
Ralstonia solanacearum GMI1000 0.57 RS_RS07695 phosphate regulon transcriptional regulatory protein PhoB 0.70 RS_RS13255 urocanate hydratase low > 80
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_03790 phoB phosphate regulon transcriptional regulator PhoB 0.75 OKGIIK_08350 hutU urocanate hydratase low > 52
Ralstonia solanacearum PSI07 0.57 RPSI07_RS15320 phosphate regulon transcriptional regulatory protein PhoB 0.71 RPSI07_RS11910 urocanate hydratase low > 81
Rhodanobacter denitrificans MT42 0.56 LRK55_RS14745 phosphate regulon transcriptional regulator PhoB 0.75 LRK55_RS16070 urocanate hydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS15030 phosphate regulon transcriptional regulator PhoB 0.75 LRK54_RS16320 urocanate hydratase low > 59
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS14075 phosphate regulon transcriptional regulator PhoB 0.72 ABZR87_RS01030 urocanate hydratase low > 80
Castellaniella sp019104865 MT123 0.56 ABCV34_RS14470 phosphate regulon transcriptional regulator PhoB 0.69 ABCV34_RS12785 urocanate hydratase low > 48
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS00720 phosphate regulon transcriptional regulator PhoB 0.75 ABZR86_RS07755 urocanate hydratase low > 74
Lysobacter sp. OAE881 0.55 ABIE51_RS14220 phosphate regulon transcriptional regulator PhoB 0.75 ABIE51_RS06295 urocanate hydratase low > 62
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_0895 phosphate regulon transcriptional regulatory protein PhoB 0.78 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) low > 40
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.4062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.73 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) low > 74
Acidovorax sp. GW101-3H11 0.52 Ac3H11_461 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.71 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) low > 79
Variovorax sp. OAS795 0.50 ABID97_RS14620 phosphate regulon transcriptional regulator PhoB 0.73 ABID97_RS03425 urocanate hydratase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF63 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.70 GFF3590 Urocanate hydratase (EC 4.2.1.49) low > 90
Variovorax sp. SCN45 0.50 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.73 GFF6408 Urocanate hydratase (EC 4.2.1.49) low > 127
Azospirillum brasilense Sp245 0.50 AZOBR_RS01105 PhoB family transcriptional regulator 0.74 AZOBR_RS21740 urocanate hydratase low > 97
Azospirillum sp. SherDot2 0.49 MPMX19_02587 Phosphate regulon transcriptional regulatory protein PhoB 0.74 MPMX19_04936 Urocanate hydratase low > 112
Rhodospirillum rubrum S1H 0.49 Rru_A0603 Two component Transcriptional regulator, Winged helix family (NCBI) 0.73 Rru_A1304 Urocanate hydratase (NCBI) low > 58
Caulobacter crescentus NA1000 0.48 CCNA_00296 phosphate regulon response regulator PhoB 0.75 CCNA_01008 urocanate hydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_00296 phosphate regulon response regulator PhoB 0.75 CCNA_01008 urocanate hydratase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS08970 phosphate regulon transcriptional regulator PhoB 0.72 A4249_RS06625 urocanate hydratase — —
Rhizobium sp. OAE497 0.47 ABIE40_RS02310 phosphate regulon transcriptional regulator PhoB 0.74 ABIE40_RS20360 urocanate hydratase low > 107
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_3651 phosphate regulon transcriptional regulatory protein PhoB 0.76 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) — —
Sinorhizobium meliloti 1021 0.47 SMc02140 phosphate regulon transcriptional regulatory protein 0.73 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Bosea sp. OAE506 0.47 ABIE41_RS08910 phosphate regulon transcriptional regulator PhoB 0.74 ABIE41_RS23655 urocanate hydratase low > 77
Agrobacterium fabrum C58 0.46 Atu0425 two component response regulator 0.74 Atu3931 urocanate hydratase — —
Phaeobacter inhibens DSM 17395 0.46 PGA1_c15730 phosphate regulon transcriptional regulatory protein PhoB 0.74 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_19685 DNA-binding response regulator 0.59 CA264_08875 urocanate hydratase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS09180 DNA-binding response regulator 0.28 CA265_RS22275 urocanate hydratase — —

Not shown: 36 genomes with orthologs for Shew_2749 only; 0 genomes with orthologs for Shew_3757 only