| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b4214 | cysQ | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | 1.0 | b3770 | ilvE | branched-chain amino acid aminotransferase (NCBI) | 0.91 | 10 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_04295 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | NOLOHH_06780 | ilvE | branched-chain-amino-acid transaminase | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03819 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | 1.00 | OHPLBJKB_04283 | | Branched-chain-amino-acid aminotransferase | low | > 73 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_10230 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | HEPCGN_13355 | ilvE | branched-chain-amino-acid transaminase | low | > 85 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS24480 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | ECOLIN_RS21660 | | branched-chain-amino-acid transaminase | low | > 52 |
| Escherichia fergusonii Becca | 1.00 | EFB2_04314 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | EFB2_04866 | | Branched-chain-amino-acid aminotransferase | low | > 86 |
| Escherichia coli BL21 | 1.00 | ECD_04086 | | 3'(2'),5'-bisphosphate nucleotidase | 1.00 | ECD_03648 | | branched-chain amino acid aminotransferase | 0.45 | 30 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_15675 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | JDDGAC_18265 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_12035 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | OKFHMN_14645 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_07225 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | BNILDI_04745 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_16120 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | KEDOAH_13505 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_02550 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | MCAODC_05150 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_09885 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 1.00 | NIAGMN_12400 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF868 | | '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 | 0.98 | GFF2902 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.85 | EX28DRAFT_3401 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 0.98 | EX28DRAFT_4442 | | branched-chain amino acid aminotransferase, group I | low | > 76 |
| Pantoea sp. MT58 | 0.85 | IAI47_02695 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.91 | IAI47_01030 | | branched-chain amino acid transaminase | 0.91 | 22 |
| Enterobacter sp. TBS_079 | 0.84 | MPMX20_00492 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.99 | MPMX20_04500 | | Branched-chain-amino-acid aminotransferase | low | > 85 |
| Klebsiella michiganensis M5al | 0.84 | BWI76_RS02735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.97 | BWI76_RS00970 | | branched chain amino acid aminotransferase | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.82 | LU632_RS02085 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.90 | LU632_RS24405 | | branched-chain amino acid transaminase | low | > 74 |
| Rahnella sp. WP5 | 0.76 | EX31_RS08720 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.90 | EX31_RS15000 | | branched-chain amino acid transaminase | 0.92 | 5 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS03955 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.90 | HER17_RS01070 | | branched-chain amino acid transaminase | 0.86 | 55 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS18320 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.91 | DZA65_RS21340 | | branched-chain amino acid transaminase | 0.57 | 53 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS17180 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.91 | DDA3937_RS20160 | | branched-chain-amino-acid transaminase | 0.71 | 50 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS17235 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.90 | HGI48_RS20300 | | branched-chain-amino-acid transaminase | low | > 71 |
| Serratia liquefaciens MT49 | 0.73 | IAI46_01745 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.92 | IAI46_24350 | | branched-chain-amino-acid transaminase | low | > 86 |
| Shewanella loihica PV-4 | 0.51 | Shew_1427 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.68 | Shew_0291 | | branched-chain amino acid aminotransferase (RefSeq) | 0.86 | 52 |
| Shewanella amazonensis SB2B | 0.48 | Sama_2232 | | cysQ protein (RefSeq) | 0.19 | Sama_3299 | | branched-chain amino acid aminotransferase (RefSeq) | 0.81 | 61 |
| Kangiella aquimarina DSM 16071 | 0.45 | B158DRAFT_2344 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.20 | B158DRAFT_0078 | | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase | low | > 40 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_2791 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.19 | Shewana3_3830 | | branched-chain amino acid aminotransferase (RefSeq) | 0.85 | 17 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_10995 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.56 | OKGIIK_11840 | ilvE | branched-chain amino acid transaminase | low | > 52 |
| Shewanella oneidensis MR-1 | 0.44 | SO1655 | cysQ-2 | cysQ protein (NCBI ptt file) | 0.19 | SO0340 | ilvE | branched-chain amino acid aminotransferase (NCBI ptt file) | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.1562.1 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.19 | Xcc-8004.4199.1 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 74 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_3885 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.21 | Pf6N2E2_477 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_10075 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.21 | AO356_22970 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | low | > 104 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_2405 | | 3'(2'), 5'-bisphosphate nucleotidase | 0.43 | HP15_436 | | branched-chain-amino-acid aminotransferase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS17065 | | 3'(2'),5'-bisphosphate nucleotidase | 0.29 | CA265_RS15785 | | branched-chain-amino-acid transaminase | low | > 88 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_01272 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.17 | MIT1002_00377 | | Branched-chain-amino-acid aminotransferase 2 | — | — |
| Pseudomonas sp. RS175 | 0.42 | PFR28_04887 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | 0.21 | PFR28_02449 | | putative branched-chain-amino-acid aminotransferase | 0.37 | 1 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS05275 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.55 | ABIE51_RS16505 | | branched-chain amino acid transaminase | low | > 62 |
| Pseudomonas putida KT2440 | 0.41 | PP_0261 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | 0.19 | PP_3511 | | Branched-chain-amino-acid aminotransferase | 0.23 | 41 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_01295 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | 0.21 | PS417_17565 | | branched-chain amino acid aminotransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.21 | PFLU_RS19375 | | branched-chain amino acid aminotransferase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_403 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.27 | PfGW456L13_4923 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.21 | PFLU_RS19375 | | branched-chain amino acid aminotransferase | 0.25 | 71 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_11850 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.20 | AO353_26655 | | branched-chain amino acid aminotransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_1668 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.22 | Pf1N1B4_4476 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 87 |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_01084 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.18 | MPMX19_02406 | | Branched-chain-amino-acid aminotransferase | low | > 112 |
| Rhodanobacter denitrificans FW104-10B01 | 0.40 | LRK54_RS04130 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.56 | LRK54_RS12020 | | branched-chain amino acid transaminase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS03900 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.56 | LRK55_RS11755 | | branched-chain amino acid transaminase | low | > 63 |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | 0.22 | Psyr_1148 | | branched chain amino acid aminotransferase apoenzyme | 0.52 | 44 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | 0.22 | Psyr_1148 | | branched chain amino acid aminotransferase apoenzyme | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS10205 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.56 | ABZR86_RS15965 | | branched-chain amino acid transaminase | 0.83 | 24 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_3960 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 0.46 | Psest_0450 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | 0.18 | 51 |
| Pseudomonas sp. S08-1 | 0.38 | OH686_14315 | | 3'(2'),5'-bisphosphate nucleotidase | 0.46 | OH686_09695 | | branched-chain amino acid aminotransferase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.37 | AMB_RS18775 | | 3'(2'),5'-bisphosphate nucleotidase | 0.31 | AMB_RS02850 | | branched-chain amino acid aminotransferase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_13735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.75 | CSW01_00145 | | branched-chain-amino-acid transaminase | low | > 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.37 | Echvi_4407 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 0.18 | Echvi_2202 | | branched-chain amino acid aminotransferase, group II | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.36 | CA264_08565 | | 3'(2'),5'-bisphosphate nucleotidase | 0.32 | CA264_06940 | | branched-chain amino acid aminotransferase | low | > 74 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_3574 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.26 | Dshi_3301 | | branched-chain amino acid aminotransferase (RefSeq) | — | — |
| Phocaeicola dorei CL03T12C01 | 0.36 | ABI39_RS02275 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.18 | ABI39_RS01415 | | branched-chain amino acid aminotransferase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.36 | HMPREF1058_RS02960 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.18 | HMPREF1058_RS02220 | | branched-chain amino acid aminotransferase | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c34500 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.29 | PGA1_c34110 | | branched-chain-amino-acid aminotransferase IlvE | — | — |
| Sinorhizobium meliloti 1021 | 0.35 | SMc01952 | | transmembrane protein | 0.21 | SMc02896 | | branched-chain amino acid aminotransferase | low | > 103 |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS09435 | | 3'-5'-bisphosphate nucleotidase | 0.31 | AZOBR_RS16425 | | branched-chain amino acid aminotransferase | low | > 97 |
| Rhodospirillum rubrum S1H | 0.34 | Rru_A0445 | | 3(2),5 -bisphosphate nucleotidase (NCBI) | 0.32 | Rru_A2223 | | Branched-chain amino acid aminotransferase I (NCBI) | — | — |
| Agrobacterium fabrum C58 | 0.34 | Atu2428 | | exopolysaccharide production protein PssB | 0.18 | Atu0871 | | branched-chain-amino-acid aminotransferase | low | > 89 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.34 | BT0411 | | CysQ, sulfite synthesis pathway protein (NCBI ptt file) | 0.19 | BT3892 | | branched-chain amino acid aminotransferase (NCBI ptt file) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS01685 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.19 | HMPREF1078_RS07855 | | branched-chain amino acid aminotransferase | low | > 61 |
| Bacteroides ovatus ATCC 8483 | 0.33 | BACOVA_01765 | | hypothetical protein | 0.30 | BACOVA_03679 | | branched-chain-amino-acid transaminase | low | > 94 |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS14720 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.19 | ABIE40_RS22240 | | branched-chain amino acid aminotransferase | low | > 107 |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS04320 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.19 | HMPREF1181_RS06865 | | branched-chain amino acid aminotransferase | low | > 56 |
| Acinetobacter radioresistens SK82 | 0.30 | MPMX26_01312 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.40 | MPMX26_00445 | | Branched-chain-amino-acid aminotransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.29 | TX73_008350 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.18 | TX73_022650 | | branched-chain amino acid aminotransferase | — | — |
| Caulobacter crescentus NA1000 | 0.28 | CCNA_03582 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.31 | CCNA_03024 | | branched-chain amino acid aminotransferase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.28 | CCNA_03582 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.31 | CCNA_03024 | | branched-chain amino acid aminotransferase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.27 | A4249_RS15260 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.27 | A4249_RS09820 | | branched-chain amino acid aminotransferase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.26 | DvMF_2027 | | inositol monophosphatase (RefSeq) | 0.46 | DvMF_2268 | | branched-chain amino acid aminotransferase (RefSeq) | low | > 51 |
| Bosea sp. OAE506 | 0.21 | ABIE41_RS11005 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.28 | ABIE41_RS11405 | | branched-chain amino acid aminotransferase | low | > 77 |
| Synechococcus elongatus PCC 7942 | 0.19 | Synpcc7942_0173 | cysQ | 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase-like | 0.29 | Synpcc7942_1029 | ilvE | branched-chain amino acid aminotransferase | low | > 38 |
Not shown: 0 genomes with orthologs for b4214 only; 24 genomes with orthologs for b3770 only