Homologs of Xcc-8004.3463.1 from Xanthomonas campestris pv. campestris strain 8004

COG0553: Superfamily II DNA/RNA helicases, SNF2 family
SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3463.1 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 100 100
o Acinetobacter radioresistens SK82 MPMX26_02863 RNA polymerase-associated protein RapA insig. 38 99
o Escherichia coli ECRC100 OKFHMN_05760 zorD Zorya protein ZorD cofit 39 96
o Cupriavidus basilensis FW507-4G11 RR42_RS36870 helicase SNF2 insig. 37 95
  Shewanella sp. ANA-3 Shewana3_3788 SNF2-related protein (RefSeq) cofit 35 49
  Vibrio cholerae E7946 ATCC 55056 CSW01_08835 helicase insig. 37 45
  Cupriavidus basilensis FW507-4G11 RR42_RS08740 helicase insig. 36 47
  Shewanella oneidensis MR-1 SO1651 Snf2 family protein (NCBI ptt file) sig. 37 46
  Rhizobium sp. OAE497 ABIE40_RS12300 DEAD/DEAH box helicase insig. 34 46
  Shewanella sp. ANA-3 Shewana3_2795 SNF2-related protein (RefSeq) strong 36 46
  Azospirillum sp. SherDot2 MPMX19_01520 hypothetical protein insig. 37 42
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3913 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 36 43
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13245 DEAD/DEAH box helicase strong 34 48
  Pseudomonas stutzeri RCH2 Psest_1651 Superfamily II DNA/RNA helicases, SNF2 family insig. 34 46
  Pseudomonas syringae pv. syringae B728a Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 32 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 32 47
  Desulfovibrio vulgaris Hildenborough JW710 DVU2085 Snf2 family protein (TIGR) strong 33 43
  Pseudomonas fluorescens FW300-N2C3 AO356_02280 helicase insig. 34 44
  Synechococcus elongatus PCC 7942 Synpcc7942_0874 DEAD/DEAH box helicase-like strong 32 45
  Rhodanobacter denitrificans MT42 LRK55_RS17115 DEAD/DEAH box helicase insig. 32 46
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10865 DEAD/DEAH box helicase sig. 32 48
  Acidovorax sp. GW101-3H11 Ac3H11_2184 FIG00348557: hypothetical protein insig. 34 47
  Rhodanobacter sp. FW510-T8 OKGIIK_13010 hepA ATP-dependent helicase cofit 32 47
  Paraburkholderia graminis OAS925 ABIE53_006198 superfamily II DNA or RNA helicase insig. 31 48
  Pseudomonas fluorescens SBW25 PFLU_RS07700 DEAD/DEAH box helicase cofit 33 44
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07700 DEAD/DEAH box helicase sig. 33 44
  Pseudomonas simiae WCS417 PS417_07625 helicase insig. 33 44
  Rhodanobacter denitrificans MT42 LRK55_RS10555 DEAD/DEAH box helicase cofit 32 48
  Mycobacterium tuberculosis H37Rv Rv2101 Probable helicase HelZ insig. 33 46
  Desulfovibrio vulgaris Miyazaki F DvMF_0789 Non-specific serine/threonine protein kinase (RefSeq) no data 33 43
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06540 Superfamily II DNA or RNA helicase, SNF2 family insig. 32 47
  Pseudomonas sp. RS175 PFR28_01121 hypothetical protein insig. 34 44
  Herbaspirillum seropedicae SmR1 HSERO_RS22930 helicase insig. 33 46
  Burkholderia phytofirmans PsJN BPHYT_RS24775 helicase insig. 31 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0444 Superfamily II DNA/RNA helicases, SNF2 family insig. 32 47
  Fusobacterium nucleatum SB010 HUW76_05800 DEAD/DEAH box helicase cofit 31 48
  Pseudomonas fluorescens FW300-N2E3 AO353_00445 helicase insig. 34 44
  Acidovorax sp. GW101-3H11 Ac3H11_2870 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 30 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2280 COG0553: Superfamily II DNA/RNA helicases, SNF2 family strong 34 44
  Shewanella loihica PV-4 Shew_1892 SNF2-related protein (RefSeq) sig. 30 47
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09905 DEAD/DEAH box helicase insig. 34 46
  Rhodospirillum rubrum S1H Rru_A0208 SNF2 helicase-related protein (NCBI) insig. 34 46
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3914 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 34 44
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4029 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 33 44
  Pseudomonas putida KT2440 PP_2146 helicase SNF2/RAD54 family insig. 34 43
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 31 48
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 29 48
  Rhodanobacter sp. FW510-T8 OKGIIK_16155 Helicase SNF2 insig. 32 46
  Variovorax sp. OAS795 ABID97_RS21795 DEAD/DEAH box helicase cofit 35 42
  Cupriavidus basilensis FW507-4G11 RR42_RS03175 DNA helicase strong 33 47
  Bacteroides ovatus ATCC 8483 BACOVA_01961 SNF2 family N-terminal domain protein insig. 30 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02650 DNA helicase insig. 30 47
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08215 DNA helicase insig. 30 48
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20105 DEAD/DEAH box helicase strong 31 48
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17010 helicase SNF2 strong 30 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22985 helicase SNF2 strong 29 46
  Bifidobacterium breve UCC2003 BBR_RS17985 helicase strong 31 48
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1542 Superfamily II DNA/RNA helicases, SNF2 family strong 28 48
  Bacteroides thetaiotaomicron VPI-5482 BT3353 Snf2 family helicase (NCBI ptt file) sig. 30 42
  Pseudomonas syringae pv. syringae B728a Psyr_1520 SNF2-related:Helicase, C-terminal insig. 29 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1520 SNF2-related:Helicase, C-terminal insig. 29 46
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17645 SNF2-related protein insig. 35 24
  Bacteroides stercoris CC31F HMPREF1181_RS07090 DEAD/DEAH box helicase insig. 23 45
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 36 13
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 27 24
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 28 21
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02520 DEAD/DEAH box helicase insig. 23 43
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 37 10
  Rhodanobacter denitrificans MT42 LRK55_RS18370 DEAD/DEAH box helicase cofit 23 34
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 31 14
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 31 10
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 31 11
  Pseudomonas simiae WCS417 PS417_06645 RNA polymerase-associated protein RapA strong 23 40
  Alteromonas macleodii MIT1002 MIT1002_00659 RNA polymerase-associated protein RapA cofit 22 43
  Pseudomonas fluorescens FW300-N2C3 AO356_04975 RNA polymerase-associated protein RapA sig. 23 40
  Pseudomonas fluorescens FW300-N2E3 AO353_17155 RNA polymerase-associated protein RapA sig. 23 40
  Pseudomonas sp. RS175 PFR28_00612 RNA polymerase-associated protein RapA insig. 23 40
  Paraburkholderia sabiae LMG 24235 QEN71_RS43920 SNF2-related protein insig. 24 34
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 31 12
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 30 10
  Pseudomonas fluorescens SBW25 PFLU_RS06675 RNA polymerase-associated protein RapA cofit 23 40
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06675 RNA polymerase-associated protein RapA sig. 23 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) strong 23 40
  Bacteroides thetaiotaomicron VPI-5482 BT4628 ATP-dependent helicase (NCBI ptt file) insig. 30 12
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 28 17
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 36 8
  Fusobacterium nucleatum SB010 HUW76_06360 DEAD/DEAH box helicase family protein cofit 26 14
  Pseudomonas putida KT2440 PP_1145 RNA polymerase-associated protein RapA sig. 23 40
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 22 40
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 29 8
  Shewanella sp. ANA-3 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) sig. 27 12
  Shewanella oneidensis MR-1 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) sig. 27 12
  Bosea sp. OAE506 ABIE41_RS19075 DISARM system SNF2-like helicase DrmD insig. 29 12
  Pseudomonas sp. S08-1 OH686_19955 RNA polymerase associated protein RapA insig. 23 41
  Vibrio cholerae E7946 ATCC 55056 CSW01_12705 RNA polymerase-associated protein RapA insig. 27 12
  Marinobacter adhaerens HP15 HP15_3376 RNA polymerase-associated protein RapA strong 24 21
  Bacteroides ovatus ATCC 8483 BACOVA_05421 helicase C-terminal domain protein insig. 27 14
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 22 40
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 28 11
  Shewanella loihica PV-4 Shew_0457 ATP-dependent helicase HepA (RefSeq) sig. 25 13