Homologs of SMc01457 from Sinorhizobium meliloti 1021

transport transmembrane protein
SEED: RND multidrug efflux transporter; Acriflavin resistance protein
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc01457 transport transmembrane protein strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS11655 efflux RND transporter permease subunit insig. 70 99
o Agrobacterium fabrum C58 Atu2054 AcrB/AcrD/AcrF family protein insig. 67 99
o Alteromonas macleodii MIT1002 MIT1002_01303 Efflux pump membrane transporter BepE insig. 44 98
o Rhodospirillum rubrum S1H Rru_A2094 Acriflavin resistance protein (NCBI) insig. 44 96
o Marinobacter adhaerens HP15 HP15_3693 multidrug resistance protein insig. 42 97
o Shewanella loihica PV-4 Shew_1852 acriflavin resistance protein (RefSeq) strong 41 97
o Shewanella oneidensis MR-1 SO1882 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 40 97
o Shewanella sp. ANA-3 Shewana3_1659 acriflavin resistance protein (RefSeq) insig. 39 96
o Shewanella amazonensis SB2B Sama_1905 AcrB/AcrD/AcrF family protein (RefSeq) strong 40 97
o Sphingobium sp. HT1-2 GFF2495 RND efflux system, inner membrane transporter insig. 40 97
  Alteromonas macleodii MIT1002 MIT1002_00729 putative efflux pump membrane transporter TtgB insig. 38 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein insig. 39 96
o Lysobacter sp. OAE881 ABIE51_RS16985 efflux RND transporter permease subunit insig. 39 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3804 Cation/multidrug efflux pump insig. 40 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1262.1 RND multidrug efflux transporter; Acriflavin resistance protein insig. 39 98
o Azospirillum brasilense Sp245 AZOBR_RS22130 acriflavin resistance protein insig. 38 96
o Acidovorax sp. GW101-3H11 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein insig. 38 96
o Azospirillum sp. SherDot2 MPMX19_04343 Efflux pump membrane transporter BepE insig. 38 96
o Pseudomonas sp. S08-1 OH686_22670 RND efflux system, inner membrane transporter cofit 36 96
o Dechlorosoma suillum PS Dsui_1555 cation/multidrug efflux pump cofit 39 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13040 acriflavin resistance protein insig. 37 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_04695 AcrB/AcrD/AcrF family protein insig. 36 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07780 efflux RND transporter permease subunit insig. 41 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19050 efflux RND transporter permease subunit insig. 35 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0681 Cation/multidrug efflux pump cofit 36 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17650 acriflavin resistance protein insig. 35 97
  Shewanella oneidensis MR-1 SO3484 AcrB/AcrD/AcrF family protein (NCBI ptt file) sig. 36 97
  Shewanella sp. ANA-3 Shewana3_1083 acriflavin resistance protein (RefSeq) insig. 37 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS05470 efflux RND transporter permease subunit insig. 34 95
o Bacteroides stercoris CC31F HMPREF1181_RS09455 efflux RND transporter permease subunit insig. 35 95
o Bacteroides ovatus ATCC 8483 BACOVA_03090 RND transporter, HAE1 family insig. 35 97
  Shewanella loihica PV-4 Shew_1178 acriflavin resistance protein (RefSeq) insig. 37 96
o Caulobacter crescentus NA1000 CCNA_01262 cation/multidrug efflux pump, AcrB family cofit 40 97
o Caulobacter crescentus NA1000 Δfur CCNA_01262 cation/multidrug efflux pump, AcrB family insig. 40 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13825 efflux RND transporter permease subunit insig. 34 96
o Phocaeicola dorei CL03T12C01 ABI39_RS09435 efflux RND transporter permease subunit insig. 34 96
o Bacteroides thetaiotaomicron VPI-5482 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) insig. 35 96
o Rhodopseudomonas palustris CGA009 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit cofit 35 97
o Pseudomonas sp. RS175 PFR28_03330 Multidrug efflux pump subunit AcrB insig. 35 96
  Pseudomonas sp. S08-1 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) strong 35 96
o Pseudomonas simiae WCS417 PS417_22755 acriflavine resistance protein B insig. 35 96
o Pseudomonas aeruginosa PA14 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW insig. 35 96
o Pseudomonas fluorescens SBW25 PFLU_RS24405 multidrug efflux RND transporter permease subunit insig. 35 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24405 multidrug efflux RND transporter permease subunit insig. 35 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein insig. 35 96
o Pseudomonas fluorescens FW300-N2E3 AO353_04000 acriflavine resistance protein B insig. 35 96
o Pseudomonas fluorescens FW300-N2C3 AO356_18440 acriflavine resistance protein B sig. 34 96
o Pseudomonas putida KT2440 PP_0906 putative Multidrug efflux RND transporter insig. 36 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5614 RND multidrug efflux transporter; Acriflavin resistance protein insig. 35 96
o Pseudomonas stutzeri RCH2 Psest_1153 Cation/multidrug efflux pump strong 35 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_00850 multidrug resistance protein cofit 33 96
o Pseudomonas sp. BP01 JOY50_RS14955 multidrug efflux RND transporter permease subunit insig. 36 96
  Pseudomonas sp. BP01 JOY50_RS22265 MexW/MexI family multidrug efflux RND transporter permease subunit insig. 35 96
  Rhodospirillum rubrum S1H Rru_A3699 Acriflavin resistance protein (NCBI) strong 34 96
  Pseudomonas putida KT2440 PP_2065 Multidrug efflux RND transporter insig. 35 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein insig. 35 96
o Pseudomonas sp. DMC3 GFF5069 Multidrug efflux pump subunit AcrB cofit 35 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11745 efflux RND transporter permease subunit insig. 33 96
o Pseudomonas sp. SVBP6 COO64_RS12055 multidrug efflux RND transporter permease subunit insig. 34 96
o Variovorax sp. SCN45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system insig. 34 97
  Pseudomonas aeruginosa PA14 IKLFDK_21660 multidrug efflux RND transporter permease MexI insig. 36 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1217 RND multidrug efflux transporter; Acriflavin resistance protein cofit 34 97
  Pseudomonas sp. SVBP6 COO64_RS10725 MexW/MexI family multidrug efflux RND transporter permease subunit insig. 35 96
  Azospirillum brasilense Sp245 AZOBR_RS31320 acriflavine resistance protein B strong 34 96
  Pseudomonas fluorescens SBW25 PFLU_RS24395 multidrug efflux RND transporter permease subunit insig. 35 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24395 multidrug efflux RND transporter permease subunit insig. 35 96
o Xanthobacter sp. DMC5 GFF2738 Efflux pump membrane transporter BepE insig. 33 97
  Magnetospirillum magneticum AMB-1 AMB_RS17260 acriflavine resistance protein B cofit 34 97
  Azospirillum brasilense Sp245 AZOBR_RS14670 multidrug transporter insig. 33 95
  Pseudomonas sp. RS175 PFR28_02194 Multidrug resistance protein MdtB insig. 32 97
  Azospirillum sp. SherDot2 MPMX19_05610 Efflux pump membrane transporter BepE insig. 34 98
  Rhodanobacter sp. FW510-T8 OKGIIK_11990 acrB acriflavine resistance protein B cofit 32 97
  Azospirillum brasilense Sp245 AZOBR_RS14655 nodulation protein NolG strong 32 97
  Pseudomonas sp. SVBP6 COO64_RS14565 MdtB/MuxB family multidrug efflux RND transporter permease subunit insig. 33 95
  Pseudomonas putida KT2440 PP_3584 multidrug efflux transport system - membrane subunit insig. 32 97
  Acinetobacter radioresistens SK82 MPMX26_02516 Multidrug resistance protein MdtC insig. 30 97
  Shewanella sp. ANA-3 Shewana3_0371 acriflavin resistance protein (RefSeq) insig. 32 96
o Serratia liquefaciens MT49 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC insig. 32 96
o Burkholderia phytofirmans PsJN BPHYT_RS29560 acriflavine resistance protein B insig. 33 97
  Pseudomonas sp. BP01 JOY50_RS07350 MdtB/MuxB family multidrug efflux RND transporter permease subunit cofit 32 97
  Pseudomonas fluorescens FW300-N2C3 AO356_25875 multidrug transporter strong 32 97
o Enterobacter sp. TBS_079 MPMX20_03062 Multidrug resistance protein MdtC insig. 33 97
  Pseudomonas sp. S08-1 OH686_00925 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) cofit 33 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3266 Acriflavin resistance plasma membrane protein insig. 32 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1272 Acriflavin resistance plasma membrane protein strong 32 97
  Variovorax sp. SCN45 GFF266 RND efflux system, inner membrane transporter insig. 34 96
  Rhodanobacter denitrificans MT42 LRK55_RS11630 efflux RND transporter permease subunit cofit 31 97
o Pseudomonas syringae pv. syringae B728a Psyr_2483 Acriflavin resistance protein strong 32 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2483 Acriflavin resistance protein strong 32 98
  Desulfovibrio vulgaris Miyazaki F DvMF_1515 acriflavin resistance protein (RefSeq) strong 32 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF487 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA insig. 33 96
o Enterobacter asburiae PDN3 EX28DRAFT_0482 Cation/multidrug efflux pump insig. 32 97
o Pectobacterium carotovorum WPP14 HER17_RS06320 MdtB/MuxB family multidrug efflux RND transporter permease subunit cofit 31 97
  Azospirillum sp. SherDot2 MPMX19_01439 Multidrug resistance protein MdtC insig. 33 96
  Pseudomonas sp. DMC3 GFF3507 Multidrug resistance protein MdtB cofit 32 97
o Variovorax sp. OAS795 ABID97_RS06490 efflux RND transporter permease subunit cofit 33 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_18800 multidrug transporter subunit MdtC cofit 31 99
o Bosea sp. OAE506 ABIE41_RS20140 efflux RND transporter permease subunit insig. 33 96
  Pectobacterium carotovorum WPP14 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC cofit 32 97