Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Cupriavidus basilensis FW507-4G11 | RR42_RS10190 | | LuxR family transcriptional regulator | insig. | 100 | 100 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 42 | 98 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 42 | 98 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 42 | 98 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 40 | 98 |
o | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 44 | 99 |
o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 37 | 96 |
o | Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 40 | 99 |
o | Shewanella amazonensis SB2B | Sama_1873 | | response regulator receiver protein (RefSeq) | insig. | 42 | 99 |
o | Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 42 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01334 | | two component transcriptional regulator, LuxR family | no data | 45 | 97 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 41 | 99 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 41 | 99 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 40 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_005478 | | two-component system invasion response regulator UvrY | sig. | 44 | 97 |
o | Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 39 | 99 |
o | Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 39 | 100 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 37 | 98 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 40 | 98 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 42 | 99 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 40 | 99 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_3299 | | two component transcriptional regulator, LuxR family | sig. | 41 | 98 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3299 | | two component transcriptional regulator, LuxR family | insig. | 41 | 98 |
| Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 41 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 41 | 97 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 41 | 96 |
| Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 43 | 98 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16770 | | DNA-binding response regulator | insig. | 38 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS18125 | | DNA-binding response regulator | insig. | 38 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 38 | 99 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 43 | 98 |
| Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 43 | 98 |
| Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 43 | 98 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS18195 | | XRE family transcriptional regulator | insig. | 38 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 41 | 100 |
| Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 41 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 41 | 98 |
| Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 39 | 100 |
| Ralstonia solanacearum PSI07 | RPSI07_RS06675 | | DNA-binding response regulator | insig. | 38 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 40 | 98 |
| Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 38 | 96 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 43 | 98 |
o | Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 40 | 98 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 37 | 97 |
| Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 39 | 99 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 37 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 43 | 98 |
| Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 41 | 98 |
| Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 38 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 41 | 98 |
| Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 40 | 99 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2030 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 36 | 96 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 38 | 98 |
| Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 38 | 96 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 38 | 96 |
| Castellaniella sp019104865 MT123 | ABCV34_RS08970 | | response regulator transcription factor | insig. | 40 | 97 |
| Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 38 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_02154 | | Response regulator UvrY | strong | 37 | 98 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 35 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 39 | 98 |
| Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 40 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 39 | 98 |
| Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 38 | 96 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 35 | 98 |
| Acinetobacter radioresistens SK82 | MPMX26_00164 | | Response regulator GacA | strong | 38 | 98 |
| Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 36 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27730 | | LuxR family transcriptional regulator | no data | 39 | 99 |
| Ralstonia solanacearum GMI1000 | RS_RS21845 | | DNA-binding response regulator | insig. | 37 | 99 |
| Pseudomonas stutzeri RCH2 | Psest_3659 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 40 | 98 |
| Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 37 | 98 |
| Variovorax sp. SCN45 | GFF850 | | Two-component transcriptional response regulator, LuxR family | insig. | 42 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32670 | | response regulator transcription factor | insig. | 42 | 99 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_232 | | DNA-binding response regulator, LuxR family | insig. | 41 | 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 39 | 98 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5052 | | Two-component response regulator | no data | 38 | 96 |
| Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 36 | 98 |
| Ralstonia solanacearum PSI07 | RPSI07_RS15210 | | DNA-binding response regulator | insig. | 40 | 98 |
| Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 36 | 98 |
| Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 35 | 98 |
| Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 35 | 98 |
| Escherichia coli ECRC101 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 98 |
| Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 98 |
| Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 98 |
| Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 98 |
| Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 98 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 35 | 98 |
| Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 98 |
| Variovorax sp. SCN45 | GFF5597 | | Two-component transcriptional response regulator, LuxR family | insig. | 37 | 98 |
| Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 37 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08905 | | XRE family transcriptional regulator | insig. | 42 | 93 |
| Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 98 |
| Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 35 | 98 |
| Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 35 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30910 | | response regulator transcription factor | insig. | 39 | 98 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14300 | | response regulator transcription factor | no data | 37 | 96 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14300 | | response regulator transcription factor | sig. | 37 | 96 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02005 | | DNA-binding response regulator | insig. | 40 | 98 |
| Ralstonia solanacearum UW163 | UW163_RS15330 | | DNA-binding response regulator | insig. | 40 | 98 |
| Agrobacterium fabrum C58 | Atu5267 | | two component response regulator | no data | 39 | 98 |