Homologs of RR42_RS02870 from Cupriavidus basilensis FW507-4G11

RNA helicase
SEED: ATP-dependent RNA helicase RhlE
KEGG: ATP-dependent RNA helicase RhlE

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 79 78
o Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 84 71
o Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 81 75
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 84 70
o Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 84 70
o Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 67 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 64 87
o Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 66 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 78 70
o Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 73 70
o Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE insig. 71 73
o Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 62 86
o Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 64 78
o Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 72 70
o Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 63 85
o Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 71 70
o Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 65 83
o Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 65 82
o Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 63 82
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 69 70
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE cofit 69 70
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 69 70
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 69 70
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE cofit 69 70
  Escherichia coli ECRC101 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE insig. 69 70
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 69 70
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE insig. 69 70
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 69 70
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE no data 69 70
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 69 70
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 69 70
o Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 70 70
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 69 70
o Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 68 70
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 68 70
o Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 71 68
o Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 59 87
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 63 74
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 63 74
o Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 57 85
o Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 63 74
o Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 53 89
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 65 70
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 65 69
o Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 50 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 52 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 62 72
o Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 57 83
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 57 83
o Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 52 97
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 57 83
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 51 97
o Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 63 68
o Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 64 68
o Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 63 68
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 63 68
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 61 73
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 51 93
o Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 63 69
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 63 68
o Alteromonas macleodii MIT1002 MIT1002_03342 ATP-dependent RNA helicase RhlE insig. 51 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 55 78
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 59 68
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE strong 57 75
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08975 DEAD/DEAH box helicase insig. 59 70
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 57 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 57 66
o Rhodanobacter denitrificans MT42 LRK55_RS02395 DEAD/DEAH box helicase insig. 54 83
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02640 DEAD/DEAH box helicase sig. 54 83
o Rhodanobacter sp. FW510-T8 OKGIIK_09690 srmB RNA helicase insig. 55 83
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 51 77
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 56 70
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 56 66
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 50 86
o Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 52 79
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 51 77
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 52 77
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 58 66
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 56 69
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 56 69
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 51 77
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 58 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 55 69
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 55 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 55 69
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 51 77
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 57 66
o Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 48 89
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 55 69
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 57 66
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 56 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 55 68
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 55 68
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 55 69
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 52 78
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 54 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 54 69
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 54 68
  Shewanella oneidensis MR-1 SO1383 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 53 68