Homologs of Pf6N2E2_353 from Pseudomonas fluorescens FW300-N2E2

Bona fide RidA/YjgF/TdcF/RutC subgroup
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_353 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_26795 reactive intermediate/imine deaminase insig. 85 93
o Pseudomonas syringae pv. syringae B728a Psyr_3399 Endoribonuclease L-PSP insig. 79 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3399 Endoribonuclease L-PSP insig. 79 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4209 Translation initiation inhibitor insig. 73 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03858 2-iminobutanoate/2-iminopropanoate deaminase cofit 74 96
o Pseudomonas simiae WCS417 PS417_12920 endoribonuclease insig. 65 90
o Pseudomonas fluorescens SBW25 PFLU_RS13590 RidA family protein insig. 63 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13590 RidA family protein insig. 63 92
o Ralstonia solanacearum PSI07 RPSI07_RS06815 RidA family protein insig. 53 84
o Ralstonia solanacearum GMI1000 RS_RS24425 RidA family protein insig. 52 84
o Sphingobium sp. HT1-2 GFF2064 RidA/YER057c/UK114 superfamily protein cofit 46 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS05790 RidA family protein insig. 47 89
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16635 RidA family protein insig. 48 94
o Ralstonia solanacearum UW163 UW163_RS17990 RidA family protein insig. 48 94
o Burkholderia phytofirmans PsJN BPHYT_RS15355 endoribonuclease L-PSP insig. 52 84
  Burkholderia phytofirmans PsJN BPHYT_RS29300 endoribonuclease L-PSP insig. 50 86
  Ralstonia sp. UNC404CL21Col ABZR87_RS17675 RidA family protein insig. 53 81
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06511 reactive intermediate/imine deaminase insig. 48 86
o Paraburkholderia graminis OAS925 ABIE53_003968 2-iminobutanoate/2-iminopropanoate deaminase insig. 44 91
o Cupriavidus basilensis FW507-4G11 RR42_RS33455 endoribonuclease L-PSP insig. 46 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS19585 RidA family protein insig. 42 91
o Herbaspirillum seropedicae SmR1 HSERO_RS05705 endoribonuclease L-PSP insig. 47 84
o Variovorax sp. OAS795 ABID97_RS21535 RidA family protein no data 42 92
  Methylophilus sp. DMC18 GFF1301 2-iminobutanoate/2-iminopropanoate deaminase cofit 38 90
  Alteromonas macleodii MIT1002 MIT1002_00109 Putative reactive intermediate deaminase TdcF strong 38 89
  Fusobacterium nucleatum SB010 HUW76_10065 RidA family protein strong 39 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS38550 RidA family protein insig. 41 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17590 RidA family protein sig. 37 90
  Shewanella oneidensis MR-1 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) insig. 36 92
  Shewanella sp. ANA-3 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) sig. 35 93
  Azospirillum brasilense Sp245 AZOBR_RS32435 dfrA insig. 41 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 41 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU2647 endoribonuclease, L-PSP family (TIGR) sig. 38 88
  Shewanella loihica PV-4 Shew_3500 putative endoribonuclease L-PSP (RefSeq) strong 34 93
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 37 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20925 endoribonuclease L-PSP strong 37 94
  Ralstonia solanacearum UW163 UW163_RS22060 endoribonuclease L-PSP insig. 37 94
  Pseudomonas fluorescens FW300-N2E3 AO353_24440 reactive intermediate/imine deaminase insig. 38 88
  Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 35 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 34 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 33 90
  Shewanella amazonensis SB2B Sama_0263 YjgF-like protein (RefSeq) strong 34 91
  Acinetobacter baumannii LAC-4 RR41_RS01650 RidA family protein sig. 34 93
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 33 90
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 34 89
  Shewanella oneidensis MR-1 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) strong 33 93
  Shewanella sp. ANA-3 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) cofit 33 93
  Pseudomonas sp. SVBP6 COO64_RS01560 RidA family protein strong 34 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 34 89
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 34 89
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 33 89
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 34 89
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 34 89
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16740 RidA family protein strong 34 90
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 34 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 33 89
  Pseudomonas aeruginosa MRSN321 DY961_RS12585 RidA family protein strong 34 89
  Pseudomonas aeruginosa PA14 IKLFDK_26760 reactive intermediate/imine deaminase strong 34 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS49540 RidA family protein strong 34 89
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 34 93
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 33 90
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 33 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 33 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 33 89
  Pseudomonas orientalis W4I3 QF045_RS02190 RidA family protein strong 33 89
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 33 89
  Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase strong 34 90
  Azospirillum brasilense Sp245 AZOBR_RS04910 endoribonuclease L-PSP insig. 43 90
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 32 89
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 32 89
  Escherichia coli BL21 ECD_02980 putative reactive intermediate deaminase insig. 31 90
  Escherichia fergusonii Becca EFB2_00701 Putative reactive intermediate deaminase TdcF insig. 31 90
  Escherichia coli ECOR27 NOLOHH_10200 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECOR38 HEPCGN_17255 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECRC100 OKFHMN_18420 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECRC101 MCAODC_08935 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECRC102 NIAGMN_16185 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECRC62 BNILDI_01325 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECRC98 JDDGAC_22055 tdcF enamine/imine deaminase insig. 31 90
  Escherichia coli ECRC99 KEDOAH_09725 tdcF enamine/imine deaminase no data 31 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00587 Putative reactive intermediate deaminase TdcF insig. 31 90
  Escherichia coli Nissle 1917 ECOLIN_RS17920 enamine/imine deaminase insig. 31 90
  Escherichia coli BW25113 b3113 yhaR orf, hypothetical protein (VIMSS) strong 31 90
  Bifidobacterium breve UCC2003 BBR_RS12070 endoribonuclease L-PSP sig. 37 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_12735 RidA family protein cofit 36 90
  Rhodanobacter denitrificans MT42 LRK55_RS11525 RidA family protein cofit 34 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11800 RidA family protein strong 34 90
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 34 90
  Cellulophaga baltica 18 M666_RS12150 RidA family protein insig. 31 90
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 34 90
  Pseudomonas segetis P6 ACVTMO_RS00185 RidA family protein strong 32 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17245 RidA family protein no data 36 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1327 endoribonuclease L-PSP, putative sig. 30 90
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 31 90
  Rahnella sp. WP5 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase insig. 37 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU2203 endoribonuclease, L-PSP family (TIGR) sig. 33 91
  Klebsiella pneumoniae MKP103 KDGMDA_11455 2-iminobutanoate/2-iminopropanoate deaminase insig. 35 90
  Erwinia amylovora T8 OLJFJH_07320 2-iminobutanoate/2-iminopropanoate deaminase strong 35 89
  Klebsiella michiganensis M5al BWI76_RS02985 reactive intermediate/imine deaminase strong 36 90