Homologs of PP_2908 from Pseudomonas putida KT2440

DNA-binding transcriptional repressor
SEED: CsiR, transcriptional repressor of CsiD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2908 DNA-binding transcriptional repressor strong 100 100
o Pseudomonas sp. BP01 JOY50_RS27370 csiR DNA-binding transcriptional regulator CsiR insig. 99 100
o Klebsiella pneumoniae MKP103 KDGMDA_13820 DNA-binding transcriptional regulator CsiR insig. 62 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1569 CsiR, transcriptional repressor of CsiD insig. 61 94
o Escherichia fergusonii Becca EFB2_01266 HTH-type transcriptional repressor GlaR insig. 59 93
o Escherichia coli ECOR38 HEPCGN_20165 csiR DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli Nissle 1917 ECOLIN_RS14855 DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli BL21 ECD_02520 transcriptional repressor of csiD insig. 59 93
o Escherichia coli ECOR27 NOLOHH_12725 csiR DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli ECRC100 OKFHMN_20900 csiR DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli ECRC101 MCAODC_11420 csiR DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli ECRC102 NIAGMN_18665 csiR DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli ECRC62 BNILDI_11285 csiR DNA-binding transcriptional regulator CsiR cofit 59 93
o Escherichia coli ECRC98 JDDGAC_24560 csiR DNA-binding transcriptional regulator CsiR insig. 59 93
o Escherichia coli ECRC99 KEDOAH_07240 csiR DNA-binding transcriptional regulator CsiR no data 59 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01068 hypothetical protein insig. 59 93
o Escherichia coli BW25113 b2664 ygaE putative transcriptional regulator (VIMSS) strong 59 93
o Rhodopseudomonas palustris CGA009 TX73_017825 FCD domain-containing protein insig. 40 84
o Pseudomonas fluorescens FW300-N2C3 AO356_29960 GntR family transcriptional regulator no data 42 85
o Pseudomonas fluorescens FW300-N2E3 AO353_24300 transcriptional regulator insig. 35 87
o Variovorax sp. OAS795 ABID97_RS29370 FCD domain-containing protein no data 38 87
o Serratia liquefaciens MT49 IAI46_12455 FCD domain-containing protein insig. 35 88
  Rhodopseudomonas palustris CGA009 TX73_021615 FCD domain-containing protein insig. 36 92
o Variovorax sp. SCN45 GFF1053 no description insig. 34 87
o Bosea sp. OAE506 ABIE41_RS19155 GntR family transcriptional regulator insig. 36 92
  Bosea sp. OAE506 ABIE41_RS20215 GntR family transcriptional regulator insig. 34 85
o Dinoroseobacter shibae DFL-12 Dshi_0960 transcriptional regulator, GntR family (RefSeq) insig. 31 94
o Xanthobacter sp. DMC5 GFF2871 HTH-type transcriptional repressor GlaR sig. 35 69
o Phaeobacter inhibens DSM 17395 PGA1_c28300 transcriptional regulator, GntR family insig. 32 84
  Burkholderia phytofirmans PsJN BPHYT_RS23940 GntR family transcriptional regulator insig. 30 92
  Pseudomonas simiae WCS417 PS417_18135 GntR family transcriptional regulator no data 28 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03136 putative D-xylose utilization operon transcriptional repressor cofit 27 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02278 putative D-xylose utilization operon transcriptional repressor cofit 27 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05283 transcriptional regulator, GntR family cofit 29 92
  Paraburkholderia graminis OAS925 ABIE53_002671 DNA-binding GntR family transcriptional regulator insig. 29 87
  Azospirillum brasilense Sp245 AZOBR_RS22370 transcriptional regulator insig. 28 91
  Pseudomonas fluorescens SBW25 PFLU_RS20040 GntR family transcriptional regulator insig. 27 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20040 GntR family transcriptional regulator sig. 27 92
  Shewanella sp. ANA-3 Shewana3_3824 GntR family transcriptional regulator (RefSeq) strong 33 85
  Dechlorosoma suillum PS Dsui_0416 transcriptional regulator no data 31 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF463 Transcriptional regulator, GntR family insig. 30 87
  Shewanella amazonensis SB2B Sama_3293 GntR family transcriptional regulator (RefSeq) insig. 32 84
  Bosea sp. OAE506 ABIE41_RS11240 GntR family transcriptional regulator insig. 28 90
  Pseudomonas fluorescens FW300-N2C3 AO356_28640 GntR family transcriptional regulator insig. 27 96
  Shewanella loihica PV-4 Shew_0280 GntR family transcriptional regulator (RefSeq) insig. 33 84
  Pseudomonas sp. RS175 PFR28_01914 HTH-type transcriptional repressor RspR strong 28 90
  Bosea sp. OAE506 ABIE41_RS06650 GntR family transcriptional regulator insig. 28 84
  Paraburkholderia graminis OAS925 ABIE53_006546 DNA-binding GntR family transcriptional regulator sig. 29 85
  Azospirillum sp. SherDot2 MPMX19_05786 HTH-type transcriptional repressor RspR insig. 30 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS07670 GntR family transcriptional regulator insig. 28 90
  Shewanella oneidensis MR-1 SO0346 transcriptional regulator. GntR family (NCBI ptt file) cofit 32 85
  Xanthobacter sp. DMC5 GFF4299 HTH-type transcriptional repressor RspR insig. 28 92
  Pseudomonas simiae WCS417 PS417_21085 GntR family transcriptional regulator insig. 30 86
  Variovorax sp. OAS795 ABID97_RS03900 GntR family transcriptional regulator insig. 27 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS34305 GntR family transcriptional regulator insig. 28 86
  Magnetospirillum magneticum AMB-1 AMB_RS18145 GntR family transcriptional regulator cofit 26 89
  Pseudomonas orientalis W4I3 QF045_RS22910 GntR family transcriptional regulator insig. 30 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04362 HTH-type transcriptional repressor GlaR insig. 29 86
  Pseudomonas syringae pv. syringae B728a Psyr_2084 transcriptional regulator, GntR family sig. 29 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2084 transcriptional regulator, GntR family insig. 29 86
  Pseudomonas fluorescens FW300-N2C3 AO356_20860 GntR family transcriptional regulator insig. 29 86
o Cupriavidus basilensis FW507-4G11 RR42_RS28365 GntR family transcriptional regulator insig. 28 90
  Rhizobium sp. OAE497 ABIE40_RS23190 FCD domain-containing protein cofit 28 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6060 Propionate catabolism operon transcriptional regulator of GntR family [predicted] strong 28 86
  Cupriavidus basilensis FW507-4G11 RR42_RS27725 GntR family transcriptional regulator insig. 30 90
  Pseudomonas fluorescens SBW25 PFLU_RS22695 GntR family transcriptional regulator insig. 29 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22695 GntR family transcriptional regulator strong 29 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4119 Propionate catabolism operon transcriptional regulator of GntR family [predicted] sig. 28 86
  Bosea sp. OAE506 ABIE41_RS20680 GntR family transcriptional regulator sig. 28 91
  Pseudomonas sp. DMC3 GFF5229 HTH-type transcriptional repressor GlaR insig. 29 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3818 Propionate catabolism operon transcriptional regulator of GntR family [predicted] insig. 29 86
  Pseudomonas sp. RS175 PFR28_02929 HTH-type transcriptional repressor GlaR sig. 28 86
  Pseudomonas sp. SVBP6 COO64_RS09895 GntR family transcriptional regulator insig. 27 86
  Dickeya dadantii 3937 DDA3937_RS16715 GntR family transcriptional regulator insig. 26 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS11355 GntR family transcriptional regulator insig. 26 86
  Sinorhizobium meliloti 1021 SMa0160 GntR family transcriptional regulator insig. 30 84
  Shewanella sp. ANA-3 Shewana3_1582 GntR family transcriptional regulator (RefSeq) insig. 28 86
  Xanthobacter sp. DMC5 GFF2581 HTH-type transcriptional repressor GlaR insig. 28 86
  Cupriavidus basilensis FW507-4G11 RR42_RS07965 GntR family transcriptional regulator insig. 28 86
  Pseudomonas sp. BP01 JOY50_RS25755 GntR family transcriptional regulator insig. 29 86
  Pseudomonas sp. S08-1 OH686_01695 Propionate catabolism operon transcriptional regulator of GntR family cofit 30 86
  Pseudomonas fluorescens FW300-N2E3 AO353_00905 GntR family transcriptional regulator sig. 29 86
  Pseudomonas segetis P6 ACVTMO_RS13045 GntR family transcriptional regulator insig. 27 86
  Xanthobacter sp. DMC5 GFF3017 HTH-type transcriptional repressor RspR no data 28 86
  Xanthobacter sp. DMC5 GFF1273 HTH-type transcriptional regulator LutR insig. 31 85
  Burkholderia phytofirmans PsJN BPHYT_RS07325 GntR family transcriptional regulator insig. 30 85
  Burkholderia phytofirmans PsJN BPHYT_RS34445 GntR family transcriptional regulator insig. 30 93
  Marinobacter adhaerens HP15 HP15_1933 transcriptional regulator, GntR family insig. 29 91
  Shewanella loihica PV-4 Shew_2365 GntR family transcriptional regulator (RefSeq) sig. 27 86
  Rhodopseudomonas palustris CGA009 TX73_007535 GntR family transcriptional regulator insig. 28 84
  Pseudomonas sp. S08-1 OH686_12985 Transcriptional regulator, GntR family insig. 24 94
  Paraburkholderia graminis OAS925 ABIE53_004689 DNA-binding GntR family transcriptional regulator sig. 29 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS07005 GntR family transcriptional regulator insig. 30 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS17000 GntR family transcriptional regulator sig. 29 93
  Dinoroseobacter shibae DFL-12 Dshi_1044 transcriptional regulator, GntR family (RefSeq) insig. 28 100
  Pseudomonas stutzeri RCH2 Psest_2322 Transcriptional regulators insig. 28 83
  Pseudomonas sp. BP01 JOY50_RS06265 GntR family transcriptional regulator insig. 27 86
  Cupriavidus basilensis FW507-4G11 RR42_RS27395 GntR family transcriptional regulator strong 26 85
  Pseudomonas sp. S08-1 OH686_07655 Transcriptional regulator, GntR family insig. 25 86
  Xanthobacter sp. DMC5 GFF3152 hypothetical protein insig. 26 66