Homologs of PP_2258 from Pseudomonas putida KT2440

Sensory box protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2258 Sensory box protein insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS25465 bifunctional diguanylate cyclase/phosphodiesterase insig. 93 100
o Pseudomonas sp. SVBP6 COO64_RS09675 bifunctional diguanylate cyclase/phosphodiesterase insig. 80 100
o Pseudomonas fluorescens FW300-N2E3 AO353_00695 diguanylate cyclase strong 73 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3860 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 71 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2329 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 68 100
o Pseudomonas sp. RS175 PFR28_01072 hypothetical protein sig. 66 100
o Pseudomonas fluorescens FW300-N2C3 AO356_02520 diguanylate cyclase cofit 68 100
  Dechlorosoma suillum PS Dsui_3108 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 52 96
  Dechlorosoma suillum PS Dsui_1501 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 97
  Acidovorax sp. GW101-3H11 Ac3H11_2498 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 52 83
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 44 96
  Methylophilus sp. DMC18 GFF82 hypothetical protein cofit 43 96
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 50 82
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 94
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 41 95
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 94
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 94
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 95
  Rhodospirillum rubrum S1H Rru_A1035 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 43 86
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 97
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 38 97
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 94
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase cofit 41 96
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 42 95
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 42 95
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 40 98
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 95
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 41 96
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 40 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 40 98
  Shewanella oneidensis MR-1 SO3389 sensory box protein (NCBI ptt file) insig. 42 95
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 39 96
  Shewanella amazonensis SB2B Sama_0142 sensory box protein (RefSeq) sig. 39 98
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 40 98
  Dechlorosoma suillum PS Dsui_3167 diguanylate cyclase (GGDEF) domain-containing protein cofit 44 80
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 40 94
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 95
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 95
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 37 95
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 94
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 41 94
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 94
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 41 94
  Shewanella sp. ANA-3 Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 95
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 41 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 40 95
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 39 95
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 40 96
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 40 96
  Shewanella loihica PV-4 Shew_0813 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 42 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 41 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 41 94
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 40 94
  Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 96
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 41 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4009 GGDEF domain protein strong 40 94
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 41 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 41 94
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 39 94
  Pseudomonas sp. BP01 JOY50_RS18490 dibA phosphodiesterase DibA insig. 39 96
  Pseudomonas sp. DMC3 GFF4251 hypothetical protein cofit 41 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 39 94
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 40 94
  Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 39 96
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 94
  Castellaniella sp019104865 MT123 ABCV34_RS15140 EAL domain-containing protein insig. 41 95
  Acidovorax sp. GW101-3H11 Ac3H11_2258 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 96
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 40 94
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 38 96
  Cupriavidus basilensis FW507-4G11 RR42_RS11565 diguanylate cyclase insig. 39 94
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 38 97
  Pseudomonas sp. SVBP6 COO64_RS12500 dibA phosphodiesterase DibA cofit 40 96
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 37 93
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 40 95
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 39 96
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 39 97
  Dechlorosoma suillum PS Dsui_2605 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 94
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 40 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS14325 EAL domain-containing protein insig. 39 96
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 39 97
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 38 96
  Magnetospirillum magneticum AMB-1 AMB_RS06515 PAS domain S-box protein insig. 39 96
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 40 95
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 36 96
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 95
  Castellaniella sp019104865 MT123 ABCV34_RS04775 EAL domain-containing protein cofit 39 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 40 95
  Acidovorax sp. GW101-3H11 Ac3H11_402 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 93
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein cofit 38 95
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 38 96
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 94
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 38 93
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 39 96
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 39 97
  Rhodospirillum rubrum S1H Rru_A0612 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 39 94
  Synechococcus elongatus PCC 7942 Synpcc7942_1716 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) strong 38 95