| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_02628 | | Beta-barrel assembly-enhancing protease | insig. | 100 | 100 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS00920 | | peptidase | insig. | 68 | 90 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS01520 | | Zn-dependent protease | cofit | 41 | 94 |
| o | Rhizobium sp. OAE497 | ABIE40_RS18640 | | M48 family metalloprotease | strong | 38 | 97 |
| o | Agrobacterium fabrum C58 | Atu2710 | | hypothetical protein | strong | 38 | 92 |
| o | Sinorhizobium meliloti 1021 | SMc03872 | | hypothetical protein | no data | 39 | 95 |
| o | Rhodopseudomonas palustris CGA009 | TX73_002530 | | M48 family metalloprotease | sig. | 38 | 89 |
| o | Sphingobium sp. HT1-2 | GFF2414 | | Putative Zn-dependent protease | insig. | 37 | 96 |
| o | Xanthobacter sp. DMC5 | GFF2426 | | Beta-barrel assembly-enhancing protease | no data | 37 | 89 |
| o | Bosea sp. OAE506 | ABIE41_RS05305 | | M48 family metalloprotease | strong | 36 | 89 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_05960 | | peptidase M48 | sig. | 32 | 91 |
| o | Pseudomonas sp. S08-1 | OH686_10065 | | Peptidase M48, Ste24p | insig. | 32 | 91 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS11055 | | M48 family metalloprotease | insig. | 32 | 91 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_28290 | | peptidase M48 Ste24p | insig. | 32 | 91 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS51020 | | M48 family metalloprotease | insig. | 32 | 91 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS14750 | | M48 family metalloprotease | strong | 37 | 38 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS15035 | | M48 family metalloprotease | strong | 37 | 38 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS13580 | | M48 family metalloprotease | insig. | 36 | 40 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1260 | | hypothetical protein | insig. | 37 | 44 |
| | Methylophilus sp. DMC18 | GFF66 | | Beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Lysobacter sp. OAE881 | ABIE51_RS14215 | | M48 family metalloprotease | strong | 35 | 51 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS00725 | | M48 family metalloprotease | strong | 36 | 40 |
| | Marinobacter adhaerens HP15 | HP15_1390 | | peptidase M48, Ste24p | insig. | 34 | 52 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_03795 | | Putative beta-barrel assembly-enhancing protease | strong | 36 | 41 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS10290 | | M48 family metalloprotease | cofit | 38 | 40 |
| | Serratia liquefaciens MT49 | IAI46_18840 | | M48 family metallopeptidase | insig. | 32 | 54 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1729 | | putative Zn-dependent protease containing TPR repeats | insig. | 42 | 31 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_06545 | | peptidase M48 Ste24p | insig. | 35 | 45 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2068 | | peptidase M48 Ste24p (RefSeq) | sig. | 33 | 47 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2440 | | Putative Zn-dependent protease, contains TPR repeats | strong | 33 | 52 |
| | Cellulophaga baltica 18 | M666_RS08695 | | M48 family metalloprotease | insig. | 36 | 36 |
| | Escherichia coli ECOR38 | HEPCGN_21000 | bepA | beta-barrel assembly-enhancing protease | insig. | 33 | 55 |
| | Escherichia fergusonii Becca | EFB2_01404 | | Beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS14165 | | beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Dechlorosoma suillum PS | Dsui_3202 | | Peptidase family M48 | cofit | 33 | 50 |
| | Pseudomonas putida KT2440 | PP_1232 | | conserved exported protein of unknown function | strong | 33 | 54 |
| | Escherichia coli ECRC100 | OKFHMN_21835 | bepA | beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Escherichia coli ECRC101 | MCAODC_12365 | bepA | beta-barrel assembly-enhancing protease | strong | 32 | 55 |
| | Escherichia coli ECRC102 | NIAGMN_19605 | bepA | beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Escherichia coli ECRC98 | JDDGAC_25780 | bepA | beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4060.1 | | Exported zinc metalloprotease YfgC precursor | strong | 34 | 50 |
| | Escherichia coli BL21 | ECD_02386 | | OM protein maintenance and assembly metalloprotease and chaperone, periplasmic | no data | 32 | 55 |
| | Escherichia coli ECOR27 | NOLOHH_13485 | bepA | beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Escherichia coli ECRC62 | BNILDI_12295 | bepA | beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Escherichia coli ECRC99 | KEDOAH_06385 | bepA | beta-barrel assembly-enhancing protease | no data | 32 | 55 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01232 | | Beta-barrel assembly-enhancing protease | insig. | 32 | 55 |
| | Escherichia coli BW25113 | b2494 | yfgC | predicted peptidase (NCBI) | strong | 32 | 55 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_18400 | | Beta-barrel assembly-enhancing protease | cofit | 30 | 63 |
| | Erwinia tracheiphila SCR3 | LU632_RS08305 | | M48 family metallopeptidase | strong | 30 | 63 |
| | Pseudomonas sp. BP01 | JOY50_RS01735 | | M48 family metalloprotease | insig. | 33 | 49 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0178 | | Putative Zn-dependent protease, contains TPR repeats | insig. | 32 | 55 |
| | Enterobacter sp. TBS_079 | MPMX20_03344 | | Beta-barrel assembly-enhancing protease | strong | 32 | 55 |
| | Dickeya dadantii 3937 | DDA3937_RS06050 | | M48 family metallopeptidase | sig. | 34 | 40 |
| | Pectobacterium carotovorum WPP14 | HER17_RS15440 | | M48 family metallopeptidase | strong | 34 | 40 |
| | Dickeya dianthicola 67-19 | HGI48_RS06095 | | M48 family metallopeptidase | cofit | 34 | 40 |
| | Dickeya dianthicola ME23 | DZA65_RS06445 | | M48 family metallopeptidase | insig. | 34 | 40 |
| | Shewanella loihica PV-4 | Shew_2842 | | peptidase M48, Ste24p (RefSeq) | sig. | 30 | 52 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15095 | | M48 family metallopeptidase | cofit | 29 | 54 |
| | Caulobacter crescentus NA1000 | CCNA_00921 | | zinc metalloprotease | sig. | 35 | 38 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00921 | | zinc metalloprotease | cofit | 35 | 38 |
| | Shewanella amazonensis SB2B | Sama_2507 | | hypothetical protein (RefSeq) | insig. | 36 | 40 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15705 | | M48 family metallopeptidase | cofit | 36 | 33 |
| | Shewanella oneidensis MR-1 | SO1137 | | conserved hypothetical protein (NCBI ptt file) | sig. | 31 | 40 |
| | Klebsiella michiganensis M5al | BWI76_RS20925 | | peptidase M48 | strong | 31 | 52 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_27765 | | beta-barrel assembly-enhancing protease | insig. | 31 | 52 |
| | Pantoea sp. MT58 | IAI47_05205 | | M48 family metallopeptidase | insig. | 29 | 54 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10785 | | hypothetical protein | insig. | 30 | 55 |
| | Pseudomonas stutzeri RCH2 | Psest_1510 | | Putative Zn-dependent protease, contains TPR repeats | strong | 32 | 53 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2175 | | Exported zinc metalloprotease YfgC precursor | insig. | 31 | 51 |
| | Alteromonas macleodii MIT1002 | MIT1002_03052 | | TPR repeat-containing protein YfgC precursor | insig. | 30 | 42 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1543 | | Peptidase M48, Ste24p | sig. | 29 | 54 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1543 | | Peptidase M48, Ste24p | strong | 29 | 54 |
| | Dechlorosoma suillum PS | Dsui_0003 | | putative Zn-dependent protease | strong | 34 | 40 |
| | Pseudomonas sp. S08-1 | OH686_19195 | | Exported zinc metalloprotease YfgC precursor | strong | 30 | 56 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS07455 | | M48 family metallopeptidase | strong | 32 | 52 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_04560 | | peptidase M48 | strong | 32 | 52 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS45335 | | M48 family metallopeptidase | strong | 32 | 52 |
| | Alteromonas macleodii MIT1002 | MIT1002_02211 | | TPR repeat-containing protein YfgC precursor | strong | 34 | 40 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4512 | | Exported zinc metalloprotease YfgC precursor | strong | 30 | 46 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0483 | | peptidase M48 Ste24p (RefSeq) | strong | 37 | 42 |
| | Pseudomonas sp. S08-1 | OH686_14520 | | hypothetical protein | insig. | 33 | 42 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2752 | | Exported zinc metalloprotease YfgC precursor | strong | 32 | 46 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS03305 | | peptidase M48 | sig. | 34 | 47 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17130 | | Zn-dependent protease | insig. | 28 | 52 |
| | Methylophilus sp. DMC18 | GFF2283 | | Beta-barrel assembly-enhancing protease | cofit | 30 | 47 |
| | Acinetobacter radioresistens SK82 | MPMX26_01126 | | Beta-barrel assembly-enhancing protease | no data | 33 | 37 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3388 | | lipoprotein, putative (TIGR) | insig. | 33 | 46 |
| | Rahnella sp. WP5 | EX31_RS22720 | | M48 family metallopeptidase | insig. | 31 | 40 |
| | Shewanella sp. ANA-3 | Shewana3_0964 | | peptidase M48, Ste24p (RefSeq) | cofit | 30 | 40 |
| | Pseudomonas segetis P6 | MPMX49_01697 | | Beta-barrel assembly-enhancing protease | strong | 32 | 41 |
| | Shewanella oneidensis MR-1 | SO2869 | | conserved hypothetical protein (NCBI ptt file) | strong | 35 | 40 |
| | Pseudomonas sp. SVBP6 | COO64_RS20220 | | M48 family metalloprotease | insig. | 32 | 54 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1578 | | TPR domain protein (TIGR) | sig. | 31 | 55 |
| | Erwinia amylovora T8 | OLJFJH_10615 | | Beta-barrel assembly-enhancing protease | insig. | 32 | 44 |
| | Pseudomonas sp. RS175 | PFR28_00694 | | Beta-barrel assembly-enhancing protease | strong | 30 | 46 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2512 | | Exported zinc metalloprotease YfgC precursor | strong | 36 | 36 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS07945 | | M48 family metalloprotease | insig. | 34 | 41 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04555 | | peptidase M48 | strong | 33 | 41 |
| | Shewanella sp. ANA-3 | Shewana3_1649 | | peptidase M48, Ste24p (RefSeq) | sig. | 35 | 40 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0072 | | Peptidase family M48. | insig. | 33 | 36 |