| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Methanococcus maripaludis JJ | MMJJ_RS05540 | | LysR family transcriptional regulator | strong | 100 | 100 |
| o | Methanococcus maripaludis S2 | MMP_RS08815 | | LysR family transcriptional regulator | no data | 100 | 100 |
| o | Desulfovibrio vulgaris Hildenborough JW710 | DVU1331 | | transcriptional regulator, LysR family (TIGR) | sig. | 28 | 94 |
| o | Dechlorosoma suillum PS | Dsui_2410 | | transcriptional regulator | cofit | 28 | 98 |
| o | Azospirillum sp. SherDot2 | MPMX19_00813 | | HTH-type transcriptional regulator CysL | insig. | 30 | 96 |
| o | Pseudomonas sp. S08-1 | OH686_18820 | | Transcriptional regulator, LysR family | insig. | 28 | 99 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_05396 | | LysR substrate binding domain protein | strong | 28 | 93 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1204 | | Transcriptional regulator | strong | 27 | 91 |
| o | Phocaeicola dorei CL03T12C01 | ABI39_RS18875 | | LysR family transcriptional regulator | insig. | 28 | 89 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04990 | | LysR family transcriptional regulator | insig. | 28 | 89 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS11950 | | LysR family transcriptional regulator | cofit | 28 | 89 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS12840 | | LysR family transcriptional regulator | cofit | 28 | 99 |
| o | Rahnella sp. WP5 | EX31_RS19050 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01341 | | HTH-type transcriptional activator CmpR | cofit | 27 | 99 |
| o | Pseudomonas simiae WCS417 | PS417_05850 | | LysR family transcriptional regulator | strong | 27 | 99 |
| o | Rhodospirillum rubrum S1H | Rru_A0606 | | Transcriptional Regulator, LysR family (NCBI) | no data | 29 | 88 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS07470 | | LysR family transcriptional regulator | no data | 29 | 94 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS05920 | | LysR family transcriptional regulator | insig. | 27 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05920 | | LysR family transcriptional regulator | sig. | 27 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3152 | | LysR family transcriptional regulator PA3398 | sig. | 27 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS20700 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| o | Pseudomonas putida KT2440 | PP_5138 | | putative transcriptional regulator LysR family | insig. | 29 | 98 |
| | Pseudomonas simiae WCS417 | PS417_26950 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_02949 | | HTH-type transcriptional activator CmpR | insig. | 28 | 91 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_05630 | | LysR family transcriptional regulator | sig. | 27 | 99 |
| | Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 24 | 99 |
| o | Pseudomonas segetis P6 | MPMX49_03322 | | HTH-type transcriptional activator CmpR | insig. | 28 | 99 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_16845 | | LysR family transcriptional regulator | sig. | 27 | 99 |
| o | Pseudomonas sp. SVBP6 | COO64_RS19970 | | LysR family transcriptional regulator | insig. | 26 | 99 |
| o | Escherichia coli BL21 | ECD_02086 | | putative DNA-binding transcriptional regulator | insig. | 29 | 99 |
| o | Escherichia coli ECOR38 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli ECRC100 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli ECRC101 | MCAODC_14545 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli ECRC102 | NIAGMN_21260 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli ECRC62 | BNILDI_13990 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli ECRC98 | JDDGAC_27455 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli ECRC99 | KEDOAH_04690 | yieE | DNA-binding transcriptional regulator YeiE | no data | 29 | 99 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01554 | | HTH-type transcriptional regulator CysL | insig. | 29 | 99 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS12630 | | DNA-binding transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Escherichia coli BW25113 | b2157 | yeiE | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 29 | 99 |
| o | Pseudomonas sp. DMC3 | GFF2119 | | HTH-type transcriptional activator CmpR | insig. | 27 | 99 |
| | Pseudomonas putida KT2440 | PP_1637 | | Transcriptional regulator, LysR family | sig. | 27 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_17440 | | LysR family transcriptional regulator | insig. | 27 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2984 | | LysR family transcriptional regulator PA3398 | strong | 27 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS26205 | | LysR family transcriptional regulator | insig. | 26 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05531 | | HTH-type transcriptional activator CmpR | cofit | 31 | 94 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_25865 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 28 | 100 |
| | Rhodospirillum rubrum S1H | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | strong | 27 | 92 |
| o | Pseudomonas sp. RS175 | PFR28_00480 | | HTH-type transcriptional activator CmpR | sig. | 26 | 99 |
| o | Bacteroides thetaiotaomicron VPI-5482 | BT4599 | | putative transcriptional regulator (NCBI ptt file) | strong | 26 | 93 |
| | Pseudomonas sp. DMC3 | GFF257 | | HTH-type transcriptional activator CmpR | insig. | 31 | 94 |
| o | Erwinia tracheiphila SCR3 | LU632_RS17295 | | LysR family transcriptional regulator | insig. | 28 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS23820 | finR | LysR family transcriptional regulator FinR | cofit | 27 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3777 | | LysR family transcriptional regulator YeiE | insig. | 29 | 99 |
| o | Enterobacter sp. TBS_079 | MPMX20_03128 | | HTH-type transcriptional activator CmpR | sig. | 28 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 27 | 99 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 27 | 99 |
| | Dechlorosoma suillum PS | Dsui_2257 | | transcriptional regulator | cofit | 27 | 99 |
| o | Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 28 | 96 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4660 | | LysR family transcriptional regulator PA3398 | insig. | 28 | 92 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS12590 | | LysR family transcriptional regulator | sig. | 25 | 96 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_11795 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| o | Klebsiella michiganensis M5al | BWI76_RS19690 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS34015 | | LysR family transcriptional regulator | insig. | 25 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2292 | | Transcriptional regulators, LysR family | insig. | 31 | 94 |
| o | Pantoea sp. MT58 | IAI47_06680 | | LysR family transcriptional regulator | strong | 29 | 99 |
| o | Shewanella loihica PV-4 | Shew_2387 | | LysR family transcriptional regulator (RefSeq) | sig. | 30 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS12735 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_0399 | | Transcriptional regulator | sig. | 27 | 99 |
| o | Serratia liquefaciens MT49 | IAI46_17215 | | LysR family transcriptional regulator | insig. | 27 | 99 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_960 | | Transcriptional regulators, LysR family | insig. | 30 | 94 |
| o | Escherichia fergusonii Becca | EFB2_01699 | | HTH-type transcriptional regulator CysL | insig. | 30 | 90 |
| o | Escherichia coli ECOR27 | NOLOHH_15070 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 30 | 90 |
| | Shewanella loihica PV-4 | Shew_2531 | | LysR family transcriptional regulator (RefSeq) | insig. | 26 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_08415 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS32560 | | LysR family transcriptional regulator | insig. | 29 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23600 | | LysR family transcriptional regulator | insig. | 30 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38890 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15765 | | LysR substrate-binding domain-containing protein | insig. | 28 | 91 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS00780 | | LysR family transcriptional regulator | strong | 29 | 99 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_0108 | | transcriptional regulator, LysR family (RefSeq) | insig. | 26 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15885 | | LysR family transcriptional regulator | insig. | 28 | 93 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS05920 | | LysR substrate-binding domain-containing protein | insig. | 26 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26240 | | LysR family transcriptional regulator PycR | insig. | 24 | 99 |
| o | Acinetobacter radioresistens SK82 | MPMX26_02541 | | HTH-type transcriptional regulator CysL | strong | 25 | 100 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS12535 | | LysR family transcriptional regulator | cofit | 26 | 97 |
| o | Cellulophaga baltica 18 | M666_RS17110 | | LysR substrate-binding domain-containing protein | insig. | 27 | 93 |
| o | Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 26 | 97 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12835 | | LysR family transcriptional regulator | insig. | 26 | 97 |
| | Pseudomonas sp. RS175 | PFR28_01936 | | HTH-type transcriptional activator CmpR | insig. | 29 | 94 |
| o | Rhodopseudomonas palustris CGA009 | TX73_009100 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS07930 | | LysR family transcriptional regulator | insig. | 21 | 97 |
| | Pseudomonas segetis P6 | MPMX49_00592 | | HTH-type transcriptional activator CmpR | insig. | 28 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01292 | | transcriptional regulator, LysR family | no data | 28 | 80 |
| o | Methylophilus sp. DMC18 | GFF1962 | | HTH-type transcriptional activator CmpR | insig. | 27 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS20445 | | LysR substrate-binding domain-containing protein | insig. | 27 | 97 |
| o | Shewanella oneidensis MR-1 | SO2561 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 28 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1786 | | LysR family transcriptional regulator YnfL | insig. | 26 | 99 |