Homologs of helD from Escherichia coli ECRC98

helD: DNA helicase IV
SEED: DNA helicase IV
KEGG: DNA helicase IV

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli ECRC98 JDDGAC_08820 helD DNA helicase IV sig. 100 100
o Escherichia coli ECRC100 OKFHMN_05210 helD DNA helicase IV insig. 100 100
o Escherichia coli ECRC101 MCAODC_24600 helD DNA helicase IV sig. 100 100
o Escherichia coli ECRC102 NIAGMN_02930 helD DNA helicase IV no data 100 100
o Escherichia coli ECRC99 KEDOAH_22525 helD DNA helicase IV no data 100 100
o Escherichia coli BL21 ECD_00966 DNA helicase IV insig. 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02704 DNA helicase IV cofit 100 100
o Escherichia coli BW25113 b0962 helD DNA helicase IV (NCBI) sig. 100 100
o Escherichia coli ECOR27 NOLOHH_21765 helD DNA helicase IV insig. 100 100
o Escherichia coli ECRC62 BNILDI_19930 helD DNA helicase IV insig. 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS05055 DNA helicase IV insig. 99 100
o Escherichia fergusonii Becca EFB2_03109 DNA helicase IV insig. 99 100
o Escherichia coli ECOR38 HEPCGN_23310 helD DNA helicase IV insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3253 DNA helicase IV insig. 84 100
o Enterobacter asburiae PDN3 EX28DRAFT_1981 Superfamily I DNA and RNA helicases insig. 82 100
o Enterobacter sp. TBS_079 MPMX20_01612 DNA helicase IV insig. 82 100
o Klebsiella michiganensis M5al BWI76_RS09995 DNA helicase IV sig. 77 100
o Klebsiella pneumoniae MKP103 KDGMDA_18225 DNA helicase IV insig. 78 100
o Serratia liquefaciens MT49 IAI46_08900 DNA helicase IV insig. 71 100
o Pectobacterium carotovorum WPP14 HER17_RS08445 DNA helicase IV cofit 69 100
o Erwinia amylovora T8 OLJFJH_15910 DNA helicase IV insig. 70 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04710 DNA helicase IV strong 69 100
o Rahnella sp. WP5 EX31_RS18015 DNA helicase IV insig. 68 100
o Pantoea sp. MT58 IAI47_12620 DNA helicase IV insig. 69 100
o Dickeya dianthicola 67-19 HGI48_RS15295 DNA helicase IV insig. 66 100
o Dickeya dadantii 3937 DDA3937_RS15220 DNA helicase IV insig. 66 100
o Dickeya dianthicola ME23 DZA65_RS16120 DNA helicase IV insig. 66 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20590 helD DNA helicase IV cofit 64 100
o Erwinia tracheiphila SCR3 LU632_RS10050 helD DNA helicase IV sig. 64 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_17760 DNA helicase IV insig. 38 100
  Bacteroides thetaiotaomicron VPI-5482 BT2999 helicase IV (NCBI ptt file) insig. 33 46
  Phocaeicola dorei CL03T12C01 ABI39_RS19005 UvrD-helicase domain-containing protein insig. 31 46
  Ralstonia solanacearum PSI07 RPSI07_RS13455 DNA-dependent helicase no data 31 49
  Ralstonia solanacearum GMI1000 RS_RS11220 DNA-dependent helicase insig. 30 49
  Ralstonia sp. UNC404CL21Col ABZR87_RS15705 UvrD-helicase domain-containing protein sig. 29 49
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03775 DNA-dependent helicase no data 30 49
  Ralstonia solanacearum UW163 UW163_RS09895 DNA-dependent helicase no data 30 49
  Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 30 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 30 49
  Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 30 49
  Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 30 49
  Castellaniella sp019104865 MT123 ABCV34_RS05210 UvrD-helicase domain-containing protein sig. 30 48
  Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 29 49
  Acinetobacter radioresistens SK82 MPMX26_02416 ATP-dependent DNA helicase Rep no data 28 49
  Herbaspirillum seropedicae SmR1 HSERO_RS02160 DNA-dependent helicase sig. 29 48
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16790 UvrD-helicase domain-containing protein no data 30 48
  Acinetobacter baumannii LAC-4 RR41_RS14860 DNA helicase Rep no data 28 49
  Rhodanobacter sp. FW510-T8 OKGIIK_13085 rep ATP-dependent DNA helicase Rep no data 31 48
  Rhodanobacter denitrificans MT42 LRK55_RS10435 UvrD-helicase domain-containing protein no data 32 48
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10795 UvrD-helicase domain-containing protein no data 32 48
  Xanthobacter sp. DMC5 GFF3566 ATP-dependent DNA helicase PcrA insig. 31 50
  Marinobacter adhaerens HP15 HP15_214 DNA helicase, ATP-dependent, RepA type no data 31 49
  Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 30 50
  Pseudomonas aeruginosa PA14 IKLFDK_26200 DNA helicase II cofit 32 46
  Synechocystis sp000284455 PCC 6803 SGL_RS06660 DNA helicase PcrA strong 28 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep no data 30 48
  Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 29 48
  Rhodanobacter denitrificans MT42 LRK55_RS06595 DNA helicase II no data 30 49
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06850 DNA helicase II sig. 30 49
  Pseudomonas stutzeri RCH2 Psest_3778 ATP-dependent DNA helicase Rep no data 29 50
  Rhodanobacter sp. FW510-T8 OKGIIK_16775 DNA helicase insig. 28 49
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01560 UvrD-helicase domain-containing protein no data 30 49
  Desulfovibrio vulgaris Miyazaki F DvMF_1758 UvrD/REP helicase (RefSeq) insig. 29 47
  Pseudomonas sp. BP01 JOY50_RS08735 uvrD DNA helicase II insig. 29 48
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 28 49
  Vibrio cholerae E7946 ATCC 55056 CSW01_01015 DNA helicase II strong 28 48
  Pseudomonas sp. DMC3 GFF512 DNA helicase II cofit 30 50
  Lysobacter sp. OAE881 ABIE51_RS00370 UvrD-helicase domain-containing protein no data 29 48
  Methylophilus sp. DMC18 GFF586 ATP-dependent DNA helicase Rep no data 29 50
  Cupriavidus basilensis FW507-4G11 RR42_RS15090 DNA helicase strong 29 49
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 29 50
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03580 UvrD-helicase domain-containing protein no data 30 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 29 50
  Kangiella aquimarina DSM 16071 B158DRAFT_0238 Superfamily I DNA and RNA helicases strong 29 49
  Methylophilus sp. DMC18 GFF1664 DNA helicase II cofit 28 48
  Magnetospirillum magneticum AMB-1 AMB_RS03725 DNA helicase II strong 28 48
  Pseudomonas sp. BP01 JOY50_RS09155 rep DNA helicase Rep no data 29 49
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5598 ATP-dependent DNA helicase UvrD/PcrA no data 29 49
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00116 DNA helicase II cofit 29 50
  Fusobacterium nucleatum SB010 HUW76_07175 UvrD-helicase domain-containing protein strong 25 47
  Marinobacter adhaerens HP15 HP15_3403 UvrD/REP helicase strong 29 49
  Pseudomonas putida KT2440 PP_5264 helicase a single-stranded DNA dependent ATPase no data 28 49
  Pseudomonas segetis P6 MPMX49_00180 DNA helicase II strong 30 48
  Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 30 48
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 29 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 29 50
  Dechlorosoma suillum PS Dsui_0933 DNA/RNA helicase, superfamily I no data 29 53
  Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 29 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 29 50
  Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 28 49
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 27 49
  Sphingobium sp. HT1-2 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) insig. 30 48
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2151 ATP-dependent DNA helicase Rep no data 29 50
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08770 uvrD DNA helicase II no data 29 48
  Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 29 48
  Klebsiella pneumoniae MKP103 KDGMDA_09710 DNA helicase II sig. 29 48
  Pseudomonas sp. SVBP6 COO64_RS01845 uvrD DNA helicase II strong 28 50
  Acinetobacter radioresistens SK82 MPMX26_00369 ATP-dependent DNA helicase PcrA insig. 28 49
  Pseudomonas syringae pv. syringae B728a Psyr_5065 ATP-dependent DNA helicase UvrD strong 28 48
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5065 ATP-dependent DNA helicase UvrD strong 28 48