Homologs of HSERO_RS00775 from Herbaspirillum seropedicae SmR1

cytochrome C biogenesis protein
SEED: Cytochrome c-type biogenesis protein CcsA/ResC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS00775 cytochrome C biogenesis protein no data 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS19080 cytochrome C biogenesis protein no data 78 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05603 cytochrome c-type biogenesis protein CcsB no data 76 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS28095 c-type cytochrome biogenesis protein CcsB strong 76 97
o Ralstonia solanacearum UW163 UW163_RS06595 c-type cytochrome biogenesis protein CcsB insig. 75 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07020 c-type cytochrome biogenesis protein CcsB strong 75 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS02670 c-type cytochrome biogenesis protein CcsB no data 77 97
o Burkholderia phytofirmans PsJN BPHYT_RS17945 cytochrome C biogenesis protein cofit 77 97
o Paraburkholderia graminis OAS925 ABIE53_003752 cytochrome c-type biogenesis protein CcsB insig. 76 97
o Ralstonia solanacearum PSI07 RPSI07_RS10220 c-type cytochrome biogenesis protein CcsB sig. 75 100
o Ralstonia solanacearum GMI1000 RS_RS14960 c-type cytochrome biogenesis protein CcsB no data 75 100
o Variovorax sp. OAS795 ABID97_RS23320 c-type cytochrome biogenesis protein CcsB strong 60 97
o Castellaniella sp019104865 MT123 ABCV34_RS12675 c-type cytochrome biogenesis protein CcsB no data 56 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1349 Cytochrome c-type biogenesis protein CcsA/ResC no data 55 99
  Variovorax sp. SCN45 GFF5312 Cytochrome c-type biogenesis protein CcsA/ResC no data 61 68
  Acidovorax sp. GW101-3H11 Ac3H11_2975 Cytochrome c-type biogenesis protein CcsA/ResC no data 61 68
  Acidovorax sp. GW101-3H11 Ac3H11_2975 Cytochrome c-type biogenesis protein CcsA/ResC no data 81 33
  Variovorax sp. SCN45 GFF5312 Cytochrome c-type biogenesis protein CcsA/ResC no data 80 33
  Synechococcus elongatus PCC 7942 Synpcc7942_0511 ccsA ABC-type transport system involved in cytochrome c biogenesis permease component-like no data 32 69
  Mycobacterium tuberculosis H37Rv Rv0529 Possible cytochrome C-type biogenesis protein CcsA no data 37 55
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01450 cytochrome c biogenesis protein CcsA strong 36 60
  Bacteroides thetaiotaomicron VPI-5482 BT4430 cytochrome c biogenesis protein (ccsA) (NCBI ptt file) insig. 32 68
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0876 ABC-type transport system involved in cytochrome c biogenesis, permease component insig. 44 43
  Desulfovibrio vulgaris Miyazaki F DvMF_0297 cytochrome c assembly protein (RefSeq) insig. 34 45
  Bacteroides thetaiotaomicron VPI-5482 BT1605 cytochrome c biogenesis protein (NCBI ptt file) insig. 39 36
  Bacteroides ovatus ATCC 8483 BACOVA_00828 cytochrome c assembly protein insig. 31 66
  Bacteroides thetaiotaomicron VPI-5482 BT1415 cytochrome c biogenesis protein ccsA (NCBI ptt file) insig. 35 41
  Phocaeicola dorei CL03T12C01 ABI39_RS14190 cytochrome c biogenesis protein CcsA insig. 31 55
  Bacteroides thetaiotaomicron VPI-5482 BT2474 cytochrome c biogenesis protein ccsA (NCBI ptt file) sig. 30 66
  Bacteroides ovatus ATCC 8483 BACOVA_03806 putative cytochrome c-type biogenesis protein CcsB insig. 29 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU1462 cytochrome c assembly protein, putative (TIGR) insig. 31 42
  Desulfovibrio vulgaris Miyazaki F DvMF_3132 cytochrome c assembly protein (RefSeq) no data 32 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) no data 32 41
  Escherichia fergusonii Becca EFB2_04515 Cytochrome c-type biogenesis protein CcmF insig. 32 39
  Escherichia coli BL21 ECD_03946 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE insig. 32 39
  Escherichia coli BW25113 b4074 nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE (NCBI) insig. 32 39
  Escherichia coli Nissle 1917 ECOLIN_RS23575 heme lyase CcmF/NrfE family subunit cofit 32 39
  Escherichia coli ECRC101 OKFHMN_12800 nrfF heme lyase NrfEFG subunit NrfF insig. 32 39
  Escherichia coli ECRC101 MCAODC_03310 nrfF heme lyase NrfEFG subunit NrfF insig. 32 39
  Escherichia coli ECRC102 NIAGMN_10645 nrfF heme lyase NrfEFG subunit NrfF insig. 32 39
  Escherichia coli ECRC98 JDDGAC_16435 nrfF heme lyase NrfEFG subunit NrfF no data 32 39
  Escherichia coli ECRC99 KEDOAH_15350 nrfF heme lyase NrfEFG subunit NrfF no data 32 39
  Escherichia coli ECOR38 HEPCGN_11425 ccmF Cytochrome c biogenesis protein CcmF cofit 32 39
  Castellaniella sp019104865 MT123 ABCV34_RS09015 cytochrome c biogenesis protein CcsA no data 29 35
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10825 heme lyase CcmF/NrfE family subunit no data 34 39
  Lysobacter sp. OAE881 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit strong 33 39
  Caulobacter crescentus NA1000 CCNA_02848 heme chaperone-apocytochrome heme-lyase strong 30 39
  Caulobacter crescentus NA1000 Δfur CCNA_02848 heme chaperone-apocytochrome heme-lyase cofit 30 39
  Rhodopseudomonas palustris CGA009 TX73_009900 heme lyase CcmF/NrfE family subunit no data 25 63
  Escherichia coli ECOR27 NOLOHH_05050 nrfF heme lyase NrfEFG subunit NrfF insig. 32 39
  Bosea sp. OAE506 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit no data 29 39
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03966 Cytochrome c-type biogenesis protein CcmF insig. 32 39
  Agrobacterium fabrum C58 Atu0975 cytochrome c-type synthesis protein no data 29 45
  Escherichia coli ECRC62 BNILDI_06475 ccmF Cytochrome c biogenesis protein CcmF insig. 31 39
  Desulfovibrio vulgaris Miyazaki F DvMF_0826 cytochrome c assembly protein (RefSeq) insig. 34 30
  Rhodanobacter sp. FW510-T8 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF no data 29 52
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07885 cytochrome c biogenesis protein CcsA no data 28 37
  Pectobacterium carotovorum WPP14 HER17_RS09055 heme lyase CcmF/NrfE family subunit insig. 33 39
  Dechlorosoma suillum PS Dsui_1321 ABC-type uncharacterized transport system, permease component strong 31 35
  Rhizobium sp. OAE497 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit strong 28 52
  Rahnella sp. WP5 EX31_RS19745 heme lyase CcmF/NrfE family subunit insig. 27 52
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0800 Cytochrome c biogenesis factor no data 29 42
  Pantoea sp. MT58 IAI47_06090 heme lyase CcmF/NrfE family subunit cofit 30 39
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03500 cytochrome C biogenesis protein no data 30 31
  Serratia liquefaciens MT49 IAI46_18085 heme lyase CcmF/NrfE family subunit insig. 29 40
  Herbaspirillum seropedicae SmR1 HSERO_RS01870 ABC transporter permease strong 26 36
  Rhodanobacter denitrificans MT42 LRK55_RS15815 heme lyase CcmF/NrfE family subunit no data 31 39
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16065 heme lyase CcmF/NrfE family subunit no data 31 39
  Sinorhizobium meliloti 1021 SMc02363 cytochrome C-type biogenesis transmembrane protein sig. 28 52
  Vibrio cholerae E7946 ATCC 55056 CSW01_10265 c-type cytochrome biogenesis protein CcmF strong 28 45
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit no data 27 52
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18700 cytochrome C biogenesis protein no data 30 42
  Alteromonas macleodii MIT1002 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF no data 26 54
  Kangiella aquimarina DSM 16071 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF strong 29 39
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF no data 29 39
  Escherichia coli ECOR38 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF cofit 29 40
  Desulfovibrio vulgaris Miyazaki F DvMF_3129 cytochrome c assembly protein (RefSeq) no data 36 23
  Escherichia coli BL21 ECD_02123 heme lyase, CcmF subunit insig. 29 40
  Escherichia fergusonii Becca EFB2_01660 Cytochrome c-type biogenesis protein CcmF insig. 29 40
  Escherichia coli ECOR27 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF cofit 29 40
  Escherichia coli ECRC101 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 29 40
  Escherichia coli ECRC101 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 29 40
  Escherichia coli ECRC102 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 29 40
  Escherichia coli ECRC62 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 29 40
  Escherichia coli ECRC98 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF no data 29 40
  Escherichia coli ECRC99 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF no data 29 40
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF sig. 29 40
  Escherichia coli Nissle 1917 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF no data 29 40
  Escherichia coli BW25113 b2196 ccmF heme lyase, CcmF subunit (NCBI) insig. 29 40
  Rhodospirillum rubrum S1H Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) no data 29 38
  Shewanella oneidensis MR-1 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) strong 28 50
  Marinobacter adhaerens HP15 HP15_2281 cytochrome c assembly protein no data 28 45
  Desulfovibrio vulgaris Hildenborough JW710 DVU1047 ccmC cytochrome c-type biogenesis protein CcmC (TIGR) no data 35 20
  Shewanella amazonensis SB2B Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 29 48
  Shewanella sp. ANA-3 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 28 50
  Pectobacterium carotovorum WPP14 HER17_RS09015 heme lyase CcmF/NrfE family subunit cofit 29 47
  Magnetospirillum magneticum AMB-1 AMB_RS21250 heme lyase CcmF/NrfE family subunit no data 28 39
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10410 cytochrome c biogenesis protein no data 42 14
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0172 Cytochrome c biogenesis factor strong 29 38
  Dechlorosoma suillum PS Dsui_1172 c-type cytochrome biogenesis protein CcmF no data 27 47