| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF943 | | Prolyl endopeptidase (EC 3.4.21.26) | cofit | 100 | 100 |
| o | Caulobacter crescentus NA1000 | CCNA_03802 | | serine protease, peptidase family S9A | cofit | 52 | 97 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_03802 | | serine protease, peptidase family S9A | cofit | 52 | 97 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS13280 | | prolyl oligopeptidase family serine peptidase | insig. | 49 | 99 |
| | Caulobacter crescentus NA1000 | CCNA_03801 | | prolyl endopeptidase family | insig. | 48 | 98 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03801 | | prolyl endopeptidase family | cofit | 48 | 98 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS13275 | | prolyl oligopeptidase family serine peptidase | insig. | 48 | 98 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1473 | | Serine proteases of the peptidase family S9A | insig. | 39 | 98 |
| | Shewanella amazonensis SB2B | Sama_1757 | | prolyl oligopeptidase (RefSeq) | sig. | 40 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_2229 | | peptidase S9 prolyl oligopeptidase (RefSeq) | insig. | 40 | 97 |
| | Serratia liquefaciens MT49 | IAI46_11445 | | S9 family peptidase | insig. | 42 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17310 | | prolyl oligopeptidase family serine peptidase | insig. | 42 | 98 |
| | Shewanella oneidensis MR-1 | SO2047 | | prolyl oligopeptidase family protein (NCBI ptt file) | insig. | 38 | 97 |
| | Sphingobium sp. HT1-2 | GFF244 | | Prolyl endopeptidase (EC 3.4.21.26) | cofit | 41 | 97 |
| | Lysobacter sp. OAE881 | ABIE51_RS03005 | | prolyl oligopeptidase family serine peptidase | insig. | 40 | 98 |
| | Variovorax sp. SCN45 | GFF3777 | | Prolyl endopeptidase (EC 3.4.21.26) | insig. | 41 | 98 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.838.1 | | Prolyl endopeptidase (EC 3.4.21.26) | insig. | 40 | 100 |
| o | Rahnella sp. WP5 | EX31_RS23015 | | S9 family peptidase | insig. | 40 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS00165 | | prolyl oligopeptidase family serine peptidase | insig. | 39 | 97 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS06645 | | prolyl oligopeptidase family serine peptidase | insig. | 39 | 97 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS06390 | | prolyl oligopeptidase family serine peptidase | insig. | 39 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS01775 | | prolyl oligopeptidase family serine peptidase | insig. | 39 | 97 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_16990 | | Prolyl oligopeptidase | insig. | 39 | 98 |
| | Mycobacterium tuberculosis H37Rv | Rv0457c | | Probable peptidase | insig. | 38 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00455 | | prolyl oligopeptidase | insig. | 35 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_002803 | | prolyl oligopeptidase | insig. | 36 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12930 | | peptidase S9 | insig. | 36 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_02282 | | Prolyl endopeptidase precursor | insig. | 29 | 93 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16475 | | S9 family peptidase | insig. | 36 | 49 |
| | Shewanella oneidensis MR-1 | SO2753 | | prolyl endopeptidase (NCBI ptt file) | insig. | 34 | 46 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS22005 | | S9 family peptidase | insig. | 38 | 42 |
| | Shewanella sp. ANA-3 | Shewana3_2536 | | prolyl oligopeptidase (RefSeq) | sig. | 34 | 46 |
| | Cellulophaga baltica 18 | M666_RS04370 | | prolyl oligopeptidase family serine peptidase | cofit | 27 | 96 |
| | Shewanella loihica PV-4 | Shew_1522 | | prolyl oligopeptidase (RefSeq) | insig. | 34 | 46 |
| | Sphingobium sp. HT1-2 | GFF3195 | | Prolyl endopeptidase (EC 3.4.21.26) | cofit | 38 | 43 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_4179 | | Serine proteases of the peptidase family S9A | insig. | 28 | 93 |
| | Shewanella amazonensis SB2B | Sama_2091 | | prolyl oligopeptidase (RefSeq) | insig. | 34 | 47 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00625 | | prolyl oligopeptidase family serine peptidase | insig. | 35 | 48 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00701 | | peptidase, S9A/B/C family, catalytic domain protein | insig. | 31 | 53 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14405 | | Peptidase S9 | insig. | 34 | 46 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07655 | | prolyl oligopeptidase family serine peptidase | cofit | 34 | 46 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS07925 | | prolyl oligopeptidase family serine peptidase | insig. | 34 | 46 |
| | Bosea sp. OAE506 | ABIE41_RS18875 | | prolyl oligopeptidase family serine peptidase | insig. | 35 | 43 |
| | Enterobacter sp. TBS_079 | MPMX20_01232 | | Prolyl endopeptidase | strong | 35 | 36 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12915 | | oligopeptidase B | insig. | 24 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17900 | | prolyl oligopeptidase family serine peptidase | insig. | 30 | 42 |
| | Pseudomonas sp. S08-1 | OH686_05270 | | Protease II | insig. | 25 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_06190 | | peptidase S9 | insig. | 25 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01622 | | Protease 2 | insig. | 30 | 51 |
| | Pseudomonas simiae WCS417 | PS417_07445 | | peptidase S9 | insig. | 30 | 50 |
| | Dickeya dianthicola 67-19 | HGI48_RS10180 | | prolyl oligopeptidase family serine peptidase | insig. | 23 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1574 | | oligopeptidase B, Serine peptidase, MEROPS family S09A | insig. | 30 | 54 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1574 | | oligopeptidase B, Serine peptidase, MEROPS family S09A | insig. | 30 | 54 |
| | Dickeya dianthicola ME23 | DZA65_RS10595 | | prolyl oligopeptidase family serine peptidase | insig. | 23 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17950 | | peptidase S9 | insig. | 26 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04360 | | peptidase S9 | insig. | 30 | 50 |
| | Pseudomonas sp. BP01 | JOY50_RS01480 | | S9 family peptidase | insig. | 25 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07530 | | S9 family peptidase | insig. | 29 | 50 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07530 | | S9 family peptidase | insig. | 29 | 50 |
| | Pseudomonas sp. RS175 | PFR28_00723 | | Dipeptidyl aminopeptidase BI | insig. | 30 | 50 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3357 | | Protease II (EC 3.4.21.83) | insig. | 28 | 54 |
| | Dickeya dadantii 3937 | DDA3937_RS10150 | | prolyl oligopeptidase family serine peptidase | insig. | 22 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2713 | | Protease II (EC 3.4.21.83) | insig. | 30 | 50 |
| | Serratia liquefaciens MT49 | IAI46_09975 | | prolyl oligopeptidase family serine peptidase | insig. | 31 | 42 |
| | Pseudomonas sp. SVBP6 | COO64_RS22275 | | S9 family peptidase | insig. | 28 | 52 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20860 | | oligopeptidase B | insig. | 33 | 35 |
| | Pseudomonas sp. DMC3 | GFF2321 | | Protease 2 | cofit | 28 | 51 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4484 | | Protease II (EC 3.4.21.83) | insig. | 28 | 51 |
| | Rahnella sp. WP5 | EX31_RS24750 | | prolyl oligopeptidase family serine peptidase | insig. | 23 | 94 |
| | Serratia liquefaciens MT49 | IAI46_18560 | | S9 family peptidase | insig. | 26 | 50 |
| | Pseudomonas putida KT2440 | PP_4583 | | putative Peptidase | insig. | 24 | 96 |
| | Klebsiella michiganensis M5al | BWI76_RS18075 | | oligopeptidase B | insig. | 27 | 50 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.842.1 | | Protease II (EC 3.4.21.83) | insig. | 32 | 35 |
| | Sphingobium sp. HT1-2 | GFF834 | | Protease II (EC 3.4.21.83) | cofit | 25 | 91 |
| | Pseudomonas segetis P6 | MPMX49_02979 | | Protease 2 | insig. | 30 | 47 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2305 | | Protease II | insig. | 23 | 96 |
| | Escherichia fergusonii Becca | EFB2_02099 | | Protease 2 | insig. | 29 | 39 |
| | Escherichia coli BL21 | ECD_01816 | | protease II | insig. | 29 | 39 |
| | Escherichia coli ECOR27 | NOLOHH_16890 | ptrB | oligopeptidase B | insig. | 29 | 39 |
| | Escherichia coli ECOR38 | HEPCGN_04780 | ptrB | oligopeptidase B | insig. | 29 | 39 |
| | Escherichia coli ECRC62 | BNILDI_15685 | ptrB | oligopeptidase B | cofit | 29 | 39 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1842 | | Protease II | cofit | 23 | 81 |
| | Cellulophaga baltica 18 | M666_RS13870 | | oligopeptidase B | insig. | 32 | 33 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS02395 | | oligopeptidase B | cofit | 29 | 43 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01886 | | Protease 2 | insig. | 28 | 42 |
| | Lysobacter sp. OAE881 | ABIE51_RS03010 | | S9 family peptidase | cofit | 31 | 35 |
| | Pantoea sp. MT58 | IAI47_08515 | | prolyl oligopeptidase family serine peptidase | insig. | 29 | 43 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3776 | | Protease II | insig. | 28 | 41 |
| | Escherichia coli ECRC100 | OKFHMN_26380 | ptrB | oligopeptidase B | insig. | 28 | 39 |
| | Escherichia coli ECRC101 | MCAODC_19025 | ptrB | oligopeptidase B | insig. | 28 | 39 |
| | Escherichia coli ECRC102 | NIAGMN_01680 | ptrB | oligopeptidase B | insig. | 28 | 39 |
| | Escherichia coli ECRC98 | JDDGAC_00955 | ptrB | oligopeptidase B | insig. | 28 | 39 |
| | Escherichia coli ECRC99 | KEDOAH_01725 | ptrB | oligopeptidase B | no data | 28 | 39 |
| | Escherichia coli BW25113 | b1845 | ptrB | protease II (NCBI) | insig. | 28 | 39 |
| | Mycobacterium tuberculosis H37Rv | Rv0782 | | Probable protease II PtrBb [second part] (oligopeptidase B) | insig. | 28 | 48 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_25340 | | oligopeptidase B | insig. | 27 | 42 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0709 | | Protease II | cofit | 27 | 41 |
| | Enterobacter sp. TBS_079 | MPMX20_02752 | | Protease 2 | sig. | 27 | 41 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2324 | | Protease II | cofit | 26 | 51 |
| | Erwinia amylovora T8 | OLJFJH_12920 | | oligopeptidase B | insig. | 27 | 41 |