Homologs of GFF6543 from Variovorax sp. SCN45

Transcriptional regulator, LysR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF6543 Transcriptional regulator, LysR family insig. 100 100
o Herbaspirillum seropedicae SmR1 HSERO_RS11270 LysR family transcriptional regulator insig. 46 94
  Rahnella sp. WP5 EX31_RS15525 nitrogen assimilation transcriptional regulator insig. 37 92
  Dickeya dianthicola ME23 DZA65_RS19795 nitrogen assimilation transcriptional regulator insig. 35 92
  Variovorax sp. SCN45 GFF3056 Nitrogen assimilation regulatory protein Nac insig. 37 93
  Dickeya dianthicola 67-19 HGI48_RS18660 nitrogen assimilation transcriptional regulator NAC insig. 35 92
  Rahnella sp. WP5 EX31_RS17470 nitrogen assimilation transcriptional regulator insig. 38 92
  Cupriavidus basilensis FW507-4G11 RR42_RS27215 LysR family transcriptional regulator insig. 37 96
  Variovorax sp. OAS795 ABID97_RS27365 nitrogen assimilation transcriptional regulator NAC insig. 37 93
  Azospirillum sp. SherDot2 MPMX19_06975 HTH-type transcriptional regulator HdfR insig. 34 99
  Acidovorax sp. GW101-3H11 Ac3H11_4367 TcuR: regulates tcuABC genes used in utilization of tricarballylate no data 37 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5194 Nitrogen assimilation regulatory protein Nac insig. 37 97
  Dickeya dadantii 3937 DDA3937_RS08235 nitrogen assimilation transcriptional regulator NAC sig. 34 92
  Pseudomonas fluorescens SBW25 PFLU_RS19670 nitrogen assimilation transcriptional regulator insig. 35 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19670 nitrogen assimilation transcriptional regulator sig. 35 92
  Ralstonia solanacearum GMI1000 RS_RS21630 LysR family transcriptional regulator insig. 38 93
  Ralstonia solanacearum PSI07 RPSI07_RS02820 LysR family transcriptional regulator insig. 37 94
  Serratia liquefaciens MT49 IAI46_16755 nitrogen assimilation transcriptional regulator NAC insig. 37 86
  Pseudomonas sp. SVBP6 COO64_RS20510 LysR substrate-binding domain-containing protein cofit 36 98
  Castellaniella sp019104865 MT123 ABCV34_RS15050 LysR substrate-binding domain-containing protein insig. 33 97
  Cupriavidus basilensis FW507-4G11 RR42_RS02165 LysR family transcriptional regulator insig. 36 95
  Pseudomonas fluorescens FW300-N2E3 AO353_25060 LysR family transcriptional regulator insig. 35 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3858 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 35 98
o Dinoroseobacter shibae DFL-12 Dshi_1431 transcriptional regulator, LysR family (RefSeq) insig. 33 95
  Xanthobacter sp. DMC5 GFF3194 HTH-type transcriptional regulator ArgP insig. 34 95
  Castellaniella sp019104865 MT123 ABCV34_RS12440 LysR substrate-binding domain-containing protein insig. 33 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3634 Transcriptional regulator insig. 34 94
  Azospirillum brasilense Sp245 AZOBR_RS17420 transcriptional regulator LysR family insig. 32 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4595 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 34 97
  Pseudomonas fluorescens FW300-N2E3 AO353_23070 LysR family transcriptional regulator insig. 33 94
  Agrobacterium fabrum C58 Atu4279 LysR family transcriptional regulator insig. 33 93
  Pseudomonas fluorescens FW300-N2C3 AO356_30350 LysR family transcriptional regulator insig. 34 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1933 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 34 96
  Enterobacter asburiae PDN3 EX28DRAFT_0565 Transcriptional regulator insig. 35 85
  Variovorax sp. SCN45 GFF881 Transcriptional regulator ligR, LysR family insig. 32 95
  Enterobacter sp. TBS_079 MPMX20_02983 HTH-type transcriptional regulator ArgP strong 35 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2141 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 34 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2132 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 34 96
  Variovorax sp. SCN45 GFF602 Transcriptional regulator, LysR family => TcuR insig. 35 96
  Castellaniella sp019104865 MT123 ABCV34_RS09560 LysR substrate-binding domain-containing protein insig. 34 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01465 nitrogen assimilation transcriptional regulator cofit 34 92
  Klebsiella pneumoniae MKP103 KDGMDA_25745 nitrogen assimilation transcriptional regulator NAC insig. 34 85
  Klebsiella michiganensis M5al BWI76_RS18630 nitrogen assimilation transcriptional regulator strong 34 85
  Erwinia amylovora T8 OLJFJH_12335 nitrogen assimilation transcriptional regulator NAC insig. 33 92
  Klebsiella michiganensis M5al BWI76_RS08260 LysR family transcriptional regulator insig. 35 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS39320 LysR substrate-binding domain-containing protein insig. 32 97
  Pantoea sp. MT58 IAI47_07570 nitrogen assimilation transcriptional regulator NAC sig. 33 94
  Variovorax sp. OAS795 ABID97_RS18700 LysR substrate-binding domain-containing protein insig. 32 97
  Xanthobacter sp. DMC5 GFF2874 Hydrogen peroxide-inducible genes activator insig. 32 85
  Escherichia coli ECOR38 HEPCGN_03485 nac nitrogen assimilation transcriptional regulator NAC insig. 33 95
  Escherichia coli ECRC100 OKFHMN_25150 nac nitrogen assimilation transcriptional regulator NAC insig. 33 95
  Escherichia coli ECRC101 MCAODC_20240 nac nitrogen assimilation transcriptional regulator NAC insig. 33 95
  Escherichia coli ECRC102 NIAGMN_22655 nac nitrogen assimilation transcriptional regulator NAC cofit 33 95
  Escherichia coli ECRC62 BNILDI_14890 nac nitrogen assimilation transcriptional regulator NAC cofit 33 95
  Escherichia coli ECRC98 JDDGAC_29280 nac nitrogen assimilation transcriptional regulator NAC insig. 33 95
  Escherichia coli ECRC99 KEDOAH_02960 nac nitrogen assimilation transcriptional regulator NAC no data 33 95
  Escherichia coli ECOR27 NOLOHH_16060 nac nitrogen assimilation transcriptional regulator NAC no data 32 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01720 HTH-type transcriptional regulator GltC insig. 32 95
  Escherichia fergusonii Becca EFB2_01927 HTH-type transcriptional regulator GltC insig. 33 95
  Escherichia coli Nissle 1917 ECOLIN_RS11470 nitrogen assimilation transcriptional regulator NAC no data 33 95
  Escherichia coli BL21 ECD_01898 nitrogen assimilation regulon transcriptional regulator; autorepressor insig. 32 95
  Escherichia coli BW25113 b1988 nac DNA-binding transcriptional dual regulator of nitrogen assimilation (NCBI) strong 32 95
  Burkholderia phytofirmans PsJN BPHYT_RS27930 LysR family transcriptional regulator no data 33 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5605 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 33 95
  Azospirillum sp. SherDot2 MPMX19_04990 Hydrogen peroxide-inducible genes activator insig. 32 95
  Magnetospirillum magneticum AMB-1 AMB_RS16320 transcriptional regulator insig. 32 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS12135 LysR substrate-binding domain-containing protein insig. 31 95
  Bosea sp. OAE506 ABIE41_RS10610 LysR family transcriptional regulator insig. 32 94
  Acinetobacter radioresistens SK82 MPMX26_00849 HTH-type transcriptional regulator GltC insig. 29 96
  Acidovorax sp. GW101-3H11 Ac3H11_1181 Transcriptional regulator ligR, LysR family insig. 33 92
  Pseudomonas sp. BP01 JOY50_RS02595 LysR family transcriptional regulator insig. 32 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3796 Transcriptional regulator ligR, LysR family sig. 30 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF785 Transcriptional regulator ligR, LysR family insig. 30 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01144 transcriptional regulator, LysR family insig. 29 95
  Castellaniella sp019104865 MT123 ABCV34_RS02790 LysR substrate-binding domain-containing protein insig. 31 92
  Burkholderia phytofirmans PsJN BPHYT_RS10850 LysR family transcriptional regulator insig. 30 100
  Variovorax sp. OAS795 ABID97_RS11435 LysR family transcriptional regulator insig. 31 94
  Acinetobacter baumannii LAC-4 RR41_RS15610 LysR family transcriptional regulator insig. 34 62
  Pseudomonas sp. S08-1 OH686_06115 Transcriptional regulator, LysR family insig. 31 95
  Magnetospirillum magneticum AMB-1 AMB_RS01265 LysR family transcriptional regulator cofit 29 92
  Rhodopseudomonas palustris CGA009 TX73_024395 LysR substrate-binding domain-containing protein insig. 30 93
  Pseudomonas putida KT2440 PP_2041 Transcriptional regulator, LysR family sig. 29 95
  Acinetobacter baumannii LAC-4 RR41_RS15625 LysR family transcriptional regulator insig. 29 96
  Rhodospirillum rubrum S1H Rru_A2004 Transcriptional Regulator, LysR family (NCBI) cofit 29 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS39445 LysR family transcriptional regulator insig. 32 84
  Rhodospirillum rubrum S1H Rru_A0330 Transcriptional Regulator, LysR family (NCBI) insig. 32 92
  Dinoroseobacter shibae DFL-12 Dshi_3715 transcriptional regulator, LysR family (RefSeq) insig. 30 92
  Pseudomonas sp. BP01 JOY50_RS16635 LysR family transcriptional regulator insig. 30 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05415 LysR substrate-binding domain-containing protein insig. 32 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS39395 LysR family transcriptional regulator insig. 28 94
  Xanthobacter sp. DMC5 GFF1995 Hydrogen peroxide-inducible genes activator no data 30 98
  Paraburkholderia graminis OAS925 ABIE53_005837 LysR family nitrogen assimilation transcriptional regulator insig. 28 93
  Pseudomonas sp. BP01 JOY50_RS13700 LysR family transcriptional regulator insig. 25 95
  Pseudomonas fluorescens FW300-N2E3 AO353_20615 LysR family transcriptional regulator strong 29 90
  Pseudomonas syringae pv. syringae B728a Psyr_2180 transcriptional regulator, LysR family sig. 26 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2180 transcriptional regulator, LysR family insig. 26 95
  Pseudomonas putida KT2440 PP_1984 Transcriptional regulator, LysR family strong 29 90
  Cupriavidus basilensis FW507-4G11 RR42_RS29115 LysR family transcriptional regulator insig. 28 94
  Pseudomonas syringae pv. syringae B728a Psyr_1982 transcriptional regulator, LysR family insig. 28 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1982 transcriptional regulator, LysR family insig. 28 90