Homologs of GFF5546 from Variovorax sp. SCN45

Lactam utilization protein LamB
SEED: Lactam utilization protein LamB
KEGG: UPF0271 protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5546 Lactam utilization protein LamB insig. 100 100
o Pseudomonas syringae pv. syringae B728a Psyr_0497 LamB/YcsF cofit 72 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0497 LamB/YcsF insig. 72 97
o Castellaniella sp019104865 MT123 ABCV34_RS01510 5-oxoprolinase subunit PxpA cofit 75 98
o Agrobacterium fabrum C58 Atu3910 LamB/YcsF family protein strong 68 97
o Acinetobacter baumannii LAC-4 RR41_RS10545 LamB/YcsF family protein insig. 57 100
o Rhodopseudomonas palustris CGA009 TX73_013895 LamB/YcsF family protein sig. 52 99
  Rhodanobacter sp. FW510-T8 OKGIIK_04730 5-oxoprolinase subunit A insig. 51 98
  Magnetospirillum magneticum AMB-1 AMB_RS15095 LamB/YcsF family protein cofit 49 98
o Pseudomonas sp. BP01 JOY50_RS13635 LamB/YcsF family protein no data 47 98
  Azospirillum brasilense Sp245 AZOBR_RS14715 hypothetical protein sig. 48 98
  Phaeobacter inhibens DSM 17395 PGA1_c28700 LamB/YcsF family protein insig. 46 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05811 UPF0271 protein insig. 46 97
  Paraburkholderia graminis OAS925 ABIE53_000049 UPF0271 protein strong 45 97
  Variovorax sp. SCN45 GFF3050 Lactam utilization protein LamB insig. 49 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08790 LamB/YcsF family protein sig. 44 97
  Variovorax sp. OAS795 ABID97_RS27395 5-oxoprolinase subunit PxpA insig. 50 96
  Burkholderia phytofirmans PsJN BPHYT_RS18635 LamB/YcsF family protein insig. 45 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS28660 5-oxoprolinase subunit PxpA cofit 44 97
o Herbaspirillum seropedicae SmR1 HSERO_RS20540 LamB/YcsF family protein insig. 45 97
  Rhodospirillum rubrum S1H Rru_A1504 LamB/YcsF (NCBI) insig. 48 93
  Variovorax sp. OAS795 ABID97_RS01255 5-oxoprolinase subunit PxpA insig. 48 96
  Pseudomonas sp. BP01 JOY50_RS05130 LamB/YcsF family protein insig. 43 98
o Pseudomonas stutzeri RCH2 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B strong 47 93
o Pseudomonas sp. DMC3 GFF2327 5-oxoprolinase subunit A 3 cofit 47 95
  Fusobacterium nucleatum SB010 HUW76_07935 LamB/YcsF family protein cofit 40 97
  Variovorax sp. OAS795 ABID97_RS23840 5-oxoprolinase subunit PxpA insig. 44 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3366 Lactam utilization protein LamB insig. 46 93
o Pseudomonas simiae WCS417 PS417_21910 LamB/YcsF family protein insig. 43 97
  Pseudomonas fluorescens SBW25 PFLU_RS19640 5-oxoprolinase subunit PxpA insig. 45 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19640 5-oxoprolinase subunit PxpA insig. 45 97
  Pseudomonas syringae pv. syringae B728a Psyr_2722 LamB/YcsF insig. 43 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2722 LamB/YcsF insig. 43 97
  Ralstonia solanacearum GMI1000 RS_RS21600 hypothetical protein insig. 46 100
  Dinoroseobacter shibae DFL-12 Dshi_2026 LamB/YcsF family protein (RefSeq) sig. 44 99
  Pseudomonas fluorescens SBW25 PFLU_RS23510 5-oxoprolinase subunit PxpA insig. 43 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23510 5-oxoprolinase subunit PxpA strong 43 97
  Pseudomonas sp. BP01 JOY50_RS01450 5-oxoprolinase subunit PxpA insig. 48 93
  Cupriavidus basilensis FW507-4G11 RR42_RS00650 hypothetical protein insig. 46 97
o Pseudomonas aeruginosa MRSN321 DY961_RS22465 5-oxoprolinase subunit PxpA sig. 43 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS36860 5-oxoprolinase subunit PxpA sig. 43 97
  Ralstonia solanacearum PSI07 RPSI07_RS02850 hypothetical protein insig. 49 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10100 lactam utilization protein LamB insig. 41 98
o Pseudomonas aeruginosa PA14 IKLFDK_22965 lactam utilization protein LamB insig. 43 97
o Pseudomonas putida KT2440 PP_4577 UPF0271 protein PP_4577 strong 48 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4478 Lactam utilization protein LamB sig. 46 93
o Pseudomonas segetis P6 ACVTMO_RS07895 5-oxoprolinase subunit PxpA insig. 44 93
o Dickeya dadantii 3937 DDA3937_RS08850 5-oxoprolinase subunit PxpA insig. 41 99
  Pseudomonas aeruginosa MRSN321 DY961_RS23915 LamB/YcsF family protein insig. 46 93
  Pseudomonas putida KT2440 PP_2920 putative nitrogen-containing compound degradation enzyme strong 42 96
  Azospirillum sp. SherDot2 MPMX19_04959 5-oxoprolinase subunit A insig. 46 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS56380 LamB/YcsF family protein insig. 46 93
  Pseudomonas sp. BP01 JOY50_RS27315 5-oxoprolinase subunit PxpA insig. 42 96
o Pseudomonas orientalis W4I3 QF045_RS24020 5-oxoprolinase subunit PxpA insig. 42 96
o Pseudomonas fluorescens FW300-N2E3 AO353_17995 hypothetical protein sig. 44 93
  Bosea sp. OAE506 ABIE41_RS24170 5-oxoprolinase subunit PxpA insig. 50 98
o Pseudomonas sp. SVBP6 COO64_RS22245 5-oxoprolinase subunit PxpA insig. 47 95
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12605 5-oxoprolinase subunit PxpA insig. 39 97
o Pseudomonas sp. RS175 PFR28_00728 5-oxoprolinase subunit A 3 strong 46 93
  Variovorax sp. SCN45 GFF2324 Lactam utilization protein LamB insig. 43 97
o Dickeya dianthicola ME23 DZA65_RS09235 5-oxoprolinase subunit PxpA insig. 41 97
o Pseudomonas fluorescens FW300-N2C3 AO356_07605 lactam utilization protein LamB insig. 41 96
  Pseudomonas aeruginosa PA14 IKLFDK_10305 5-oxoprolinase subunit A 2 no data 45 94
  Pseudomonas aeruginosa PA14 IKLFDK_01525 5-oxoprolinase subunit A 3 insig. 45 93
  Pseudomonas fluorescens SBW25 PFLU_RS09840 5-oxoprolinase subunit PxpA insig. 41 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09840 5-oxoprolinase subunit PxpA strong 41 96
  Pseudomonas fluorescens FW300-N2E3 AO353_28820 lactam utilization protein LamB insig. 41 96
o Dickeya dianthicola 67-19 HGI48_RS08920 5-oxoprolinase subunit PxpA cofit 40 97
  Herbaspirillum seropedicae SmR1 HSERO_RS08780 LamB/YcsF family protein no data 44 97
  Pseudomonas orientalis W4I3 QF045_RS10120 5-oxoprolinase subunit PxpA insig. 44 94
  Pseudomonas aeruginosa MRSN321 DY961_RS16780 5-oxoprolinase subunit PxpA strong 46 95
  Pseudomonas aeruginosa PUPa3 DQ20_RS39065 5-oxoprolinase subunit PxpA sig. 46 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01627 5-oxoprolinase subunit A 3 cofit 45 94
  Marinobacter adhaerens HP15 HP15_2685 UPF0271 protein, LamB/YcsF family strong 41 93
  Enterobacter sp. TBS_079 MPMX20_01347 5-oxoprolinase subunit A sig. 42 97
  Enterobacter asburiae PDN3 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B insig. 41 98
  Dickeya dadantii 3937 DDA3937_RS08225 LamB/YcsF family protein insig. 40 97
  Pseudomonas fluorescens FW300-N2C3 AO356_04335 hypothetical protein strong 44 93
  Serratia liquefaciens MT49 IAI46_06225 5-oxoprolinase subunit PxpA cofit 42 98
  Pseudomonas fluorescens SBW25 PFLU_RS07555 LamB/YcsF family protein cofit 44 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07555 LamB/YcsF family protein strong 44 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2708 Lactam utilization protein LamB strong 45 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS15325 5-oxoprolinase subunit PxpA strong 44 96
  Agrobacterium fabrum C58 Atu4277 LamB/YcsF family protein sig. 42 97
  Shewanella loihica PV-4 Shew_0006 LamB/YcsF family protein (RefSeq) insig. 44 95
  Pseudomonas sp. S08-1 OH686_08750 Lactam utilization protein LamB insig. 44 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4618 Lactam utilization protein LamB insig. 43 93
  Pseudomonas simiae WCS417 PS417_07470 hypothetical protein insig. 44 94
  Alteromonas macleodii MIT1002 MIT1002_02298 LamB/YcsF family protein cofit 44 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_18055 hypothetical protein insig. 40 94
  Rahnella sp. WP5 EX31_RS15535 LamB/YcsF family protein insig. 40 96
  Shewanella amazonensis SB2B Sama_0021 hypothetical protein (RefSeq) sig. 43 94
  Escherichia coli BL21 ECD_00673 UPF0271 family protein insig. 40 98
  Escherichia coli ECOR27 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA insig. 40 98
  Escherichia coli ECRC62 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA insig. 40 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03004 hypothetical protein insig. 40 98
  Dickeya dianthicola ME23 DZA65_RS19805 LamB/YcsF family protein insig. 42 97
  Pectobacterium carotovorum WPP14 HER17_RS14975 5-oxoprolinase subunit PxpA cofit 41 98
  Escherichia coli ECRC100 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA cofit 40 98
  Escherichia coli ECRC101 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA insig. 40 98