| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| o | Pseudomonas fluorescens SBW25 | PFLU_RS29890 | | transcriptional regulator HexR | strong | 100 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29890 | | transcriptional regulator HexR | strong | 100 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00114 | | HTH-type transcriptional regulator HexR | cofit | 100 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS02590 | | transcriptional regulator HexR | cofit | 100 | 100 |
| | Pseudomonas simiae WCS417 | PS417_28230 | | transcriptional regulator | strong | 100 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_04521 | | HTH-type transcriptional regulator HexR | strong | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_12005 | | transcriptional regulator | strong | 99 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4276 | | Phosphogluconate repressor HexR, RpiR family | strong | 99 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_726 | | Phosphogluconate repressor HexR, RpiR family | strong | 99 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_10040 | | transcriptional regulator | strong | 99 | 100 |
| o | Pseudomonas sp. DMC3 | GFF510 | | HTH-type transcriptional regulator HexR | cofit | 99 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2008 | | Phosphogluconate repressor HexR, RpiR family | strong | 98 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS01830 | hexR | transcriptional regulator HexR | cofit | 97 | 100 |
| o | Pseudomonas putida KT2440 | PP_5350 | | Transcriptional regulator, RpiR family | strong | 96 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS08750 | hexR | transcriptional regulator HexR | cofit | 95 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_5064 | | transcriptional regulator, RpiR family | insig. | 94 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5064 | | transcriptional regulator, RpiR family | insig. | 94 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS00870 | hexR | transcriptional regulator HexR | sig. | 91 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_13095 | | Transcriptional regulator, RpiR family | cofit | 91 | 100 |
| o | Pseudomonas stutzeri RCH2 | Psest_4088 | | Transcriptional regulators | strong | 90 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS25475 | hexR;go_function=DNA-binding | transcriptional regulator HexR | sig. | 88 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_26230 | | transcriptional regulator | strong | 88 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS57925 | hexR;go_function=DNA-binding | transcriptional regulator HexR | strong | 88 | 99 |
| o | Sinorhizobium meliloti 1021 | SMc02460 | | hypothetical protein | strong | 46 | 98 |
| | Marinobacter adhaerens HP15 | HP15_2180 | | transcriptional regulator, RpiR family protein | strong | 43 | 97 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS06120 | | transcriptional regulator | sig. | 47 | 92 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS30190 | | transcriptional regulator | insig. | 46 | 94 |
| | Pantoea sp. MT58 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | insig. | 42 | 100 |
| | Shewanella amazonensis SB2B | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 43 | 97 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS16740 | | transcriptional regulator | strong | 41 | 96 |
| | Pectobacterium carotovorum WPP14 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | cofit | 44 | 97 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05825 | | transcriptional regulator HexR | cofit | 42 | 96 |
| | Escherichia fergusonii Becca | EFB2_02089 | | HTH-type transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | cofit | 43 | 100 |
| | Dickeya dianthicola 67-19 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | cofit | 44 | 97 |
| | Dickeya dianthicola ME23 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | insig. | 44 | 97 |
| | Escherichia coli ECOR27 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli ECOR38 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli ECRC100 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | cofit | 43 | 100 |
| | Escherichia coli ECRC101 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | sig. | 43 | 100 |
| | Escherichia coli ECRC102 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli ECRC62 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli ECRC98 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli ECRC99 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | no data | 43 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS05505 | | transcriptional regulator | sig. | 44 | 95 |
| | Dickeya dadantii 3937 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | cofit | 44 | 97 |
| | Serratia liquefaciens MT49 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | insig. | 44 | 97 |
| | Escherichia coli BL21 | ECD_01824 | | putative DNA-binding transcriptional regulator | cofit | 43 | 100 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | insig. | 43 | 100 |
| | Escherichia coli BW25113 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | strong | 43 | 100 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | insig. | 44 | 97 |
| | Pseudomonas stutzeri RCH2 | Psest_0851 | | Transcriptional regulators | strong | 44 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | strong | 44 | 97 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08655 | | SIS domain-containing protein | sig. | 43 | 92 |
| | Shewanella sp. ANA-3 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 42 | 97 |
| o | Paraburkholderia graminis OAS925 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | strong | 40 | 97 |
| | Pseudomonas putida KT2440 | PP_1021 | | DNA-binding transcriptional regulator | strong | 44 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS04585 | hexR | DNA-binding transcriptional regulator HexR | insig. | 44 | 96 |
| | Shewanella oneidensis MR-1 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | strong | 42 | 97 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | sig. | 43 | 96 |
| | Rahnella sp. WP5 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | sig. | 43 | 97 |
| | Pseudomonas sp. DMC3 | GFF5141 | | HTH-type transcriptional regulator HexR | cofit | 43 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | insig. | 44 | 96 |
| | Pseudomonas sp. RS175 | PFR28_00572 | | HTH-type transcriptional regulator HexR | strong | 43 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | strong | 43 | 96 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | insig. | 42 | 100 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS02370 | | transcriptional regulator HexR | cofit | 42 | 99 |
| | Shewanella loihica PV-4 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 41 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | strong | 43 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | strong | 43 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04559 | | HTH-type transcriptional regulator HexR | cofit | 43 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | insig. | 43 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_05165 | | transcriptional regulator | strong | 43 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | strong | 43 | 96 |
| | Pseudomonas simiae WCS417 | PS417_22115 | | transcriptional regulator | strong | 43 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03365 | | transcriptional regulator | strong | 43 | 96 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS07690 | | MurR/RpiR family transcriptional regulator | insig. | 44 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS18110 | | transcriptional regulator HexR | sig. | 43 | 97 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_25375 | | transcriptional regulator HexR | insig. | 44 | 97 |
| | Pseudomonas sp. S08-1 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | strong | 43 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | strong | 43 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | insig. | 43 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_04844 | | HTH-type transcriptional regulator HexR | insig. | 42 | 94 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | sig. | 40 | 96 |
| | Pseudomonas segetis P6 | ACVTMO_RS14030 | | MurR/RpiR family transcriptional regulator | sig. | 43 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01015 | | MurR/RpiR family transcriptional regulator | strong | 45 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | strong | 45 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34520 | | MurR/RpiR family transcriptional regulator | strong | 45 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_06075 | | HTH-type transcriptional regulator HexR | no data | 42 | 93 |
| | Alteromonas macleodii MIT1002 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | no data | 40 | 98 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | sig. | 40 | 93 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_2055 | | Probable transcriptional regulator | strong | 41 | 96 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_22185 | | transcriptional regulator HexR | cofit | 41 | 97 |
| | Erwinia tracheiphila SCR3 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | insig. | 41 | 97 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | insig. | 41 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05010 | | RpiR family transcriptional regulator | strong | 39 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_001273 | | glucokinase | strong | 39 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00163 | | glucokinase /transcriptional regulator, RpiR family | strong | 39 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03320 | | bifunctional transcriptional regulator/glucokinase | strong | 39 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03750 | | transcriptional regulator, RpiR family | insig. | 39 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35685 | | RpiR family transcriptional regulator | no data | 38 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_004499 | | RpiR family carbohydrate utilization transcriptional regulator | sig. | 39 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS15880 | | MurR/RpiR family transcriptional regulator | insig. | 38 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_05117 | | HTH-type transcriptional regulator HexR | insig. | 36 | 98 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16405 | | MurR/RpiR family transcriptional regulator | insig. | 40 | 80 |
| | Ralstonia solanacearum UW163 | UW163_RS17145 | | MurR/RpiR family transcriptional regulator | insig. | 40 | 80 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS07300 | | MurR/RpiR family transcriptional regulator | insig. | 39 | 80 |
| | Ralstonia solanacearum GMI1000 | RS_RS24600 | | MurR/RpiR family transcriptional regulator | insig. | 38 | 80 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22900 | | MurR/RpiR family transcriptional regulator | insig. | 38 | 79 |
| | Serratia liquefaciens MT49 | IAI46_02300 | | MurR/RpiR family transcriptional regulator | insig. | 35 | 92 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_692 | | transcriptional regulator, RpiR family | insig. | 34 | 94 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_12185 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28850 | | transcriptional regulator | insig. | 34 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS21410 | | MurR/RpiR family transcriptional regulator | insig. | 32 | 95 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS10700 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 92 |
| | Sinorhizobium meliloti 1021 | SM_b21158 | | transcriptional regulator | sig. | 30 | 95 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18180 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 93 |
| | Ralstonia solanacearum UW163 | UW163_RS20950 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS22855 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 93 |
| | Klebsiella michiganensis M5al | BWI76_RS03915 | | MurR/RpiR family transcriptional regulator | insig. | 32 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05455 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19110 | | MurR/RpiR family transcriptional regulator | sig. | 32 | 93 |
| | Variovorax sp. SCN45 | GFF6715 | | Transcriptional regulator of RpiR family in catabolic operon | insig. | 34 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS22860 | | MurR/RpiR family transcriptional regulator | strong | 32 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS03120 | | transcriptional regulator | insig. | 31 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01955 | | MurR/RpiR family transcriptional regulator | cofit | 30 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0416 | | transcriptional regulator, RpiR family | insig. | 30 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0416 | | transcriptional regulator, RpiR family | insig. | 30 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS03145 | | MurR/RpiR family transcriptional regulator | insig. | 32 | 90 |
| | Agrobacterium fabrum C58 | Atu2598 | | transcriptional regulator, RpiR family | strong | 30 | 95 |
| | Escherichia coli ECOR38 | HEPCGN_10890 | rpiR | RpiR family transcriptional regulator | insig. | 31 | 86 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2858 | | transcriptional regulator, RpiR family | insig. | 32 | 86 |
| | Klebsiella michiganensis M5al | BWI76_RS02170 | | MurR/RpiR family transcriptional regulator | insig. | 31 | 80 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_01085 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_00309 | | HTH-type transcriptional regulator RpiR | strong | 30 | 83 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3305 | | Sialic acid utilization regulator, RpiR family | insig. | 32 | 84 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS08725 | | transcriptional regulator | sig. | 29 | 96 |
| | Escherichia fergusonii Becca | EFB2_04493 | | HTH-type transcriptional regulator RpiR | insig. | 27 | 89 |
| | Escherichia coli ECOR27 | NOLOHH_04970 | alsR | als operon DNA-binding transcriptional repressor AlsR | insig. | 27 | 89 |
| | Escherichia coli ECOR38 | HEPCGN_11340 | alsR | als operon DNA-binding transcriptional repressor AlsR | insig. | 27 | 89 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23685 | | D-allose utilization transcriptional regulator AlsR | insig. | 27 | 89 |
| | Escherichia coli BW25113 | b4089 | rpiR | transcriptional repressor of rpiB expression (VIMSS) | strong | 27 | 89 |
| | Enterobacter sp. TBS_079 | MPMX20_03648 | | putative HTH-type transcriptional regulator YbbH | sig. | 31 | 86 |
| | Escherichia coli BL21 | ECD_03961 | | d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR | insig. | 27 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01892 | | transcriptional regulator, RpiR family | insig. | 31 | 96 |
| | Pseudomonas sp. DMC3 | GFF4937 | | HTH-type transcriptional regulator HexR | insig. | 29 | 96 |
| | Pseudomonas sp. RS175 | PFR28_00029 | | HTH-type transcriptional regulator HexR | insig. | 28 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS25860 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000756 | | RpiR family carbohydrate utilization transcriptional regulator | sig. | 30 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3440 | | Transcriptional regulator, RpiR family | sig. | 28 | 100 |
| | Klebsiella michiganensis M5al | BWI76_RS00065 | | MurR/RpiR family transcriptional regulator | strong | 29 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_07785 | | RpiR family transcriptional regulator | insig. | 27 | 100 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5134 | | Transcriptional regulator, RpiR family | insig. | 27 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05895 | | RpiR family transcriptional regulator | insig. | 28 | 96 |
| | Pseudomonas simiae WCS417 | PS417_23600 | | RpiR family transcriptional regulator | insig. | 28 | 98 |
| | Escherichia coli ECRC62 | BNILDI_12685 | murR | HTH-type transcriptional regulator MurR | insig. | 28 | 98 |
| | Pantoea sp. MT58 | IAI47_09995 | | MurR/RpiR family transcriptional regulator | strong | 28 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS25415 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25415 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 98 |
| | Escherichia coli BW25113 | b2427 | yfeT | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 28 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04871 | | HTH-type transcriptional regulator HexR | cofit | 28 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06160 | | MurR/RpiR family transcriptional regulator | cofit | 28 | 93 |
| | Escherichia coli BL21 | ECD_02327 | | repressor for murPQ, MurNAc 6-P inducible | insig. | 28 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2466 | | Sialic acid utilization regulator, RpiR family | insig. | 27 | 95 |
| | Escherichia coli ECOR27 | NOLOHH_13820 | murR | HTH-type transcriptional regulator MurR | insig. | 27 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01296 | | HTH-type transcriptional regulator MurR | insig. | 28 | 92 |
| | Escherichia coli ECRC100 | OKFHMN_22140 | murR | HTH-type transcriptional regulator MurR | cofit | 27 | 98 |
| | Escherichia coli ECRC101 | MCAODC_12670 | murR | HTH-type transcriptional regulator MurR | insig. | 27 | 98 |
| | Escherichia coli ECRC102 | NIAGMN_19910 | murR | HTH-type transcriptional regulator MurR | insig. | 27 | 98 |
| | Escherichia coli ECRC98 | JDDGAC_26090 | murR | HTH-type transcriptional regulator MurR | insig. | 27 | 98 |
| | Escherichia coli ECRC99 | KEDOAH_06080 | murR | HTH-type transcriptional regulator MurR | no data | 27 | 98 |
| | Escherichia coli ECOR38 | HEPCGN_21315 | murR | HTH-type transcriptional regulator MurR | insig. | 27 | 92 |
| | Klebsiella michiganensis M5al | BWI76_RS21290 | | DNA-binding transcriptional regulator | sig. | 27 | 95 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS04755 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_28415 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 95 |
| | Rahnella sp. WP5 | EX31_RS21865 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 72 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08905 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 86 |
| | Serratia liquefaciens MT49 | IAI46_19515 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 95 |
| | Escherichia coli BL21 | ECD_02455 | | putative DNA-binding transcriptional regulator | insig. | 29 | 72 |
| | Escherichia coli ECOR27 | NOLOHH_13125 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 29 | 72 |
| | Escherichia coli ECRC100 | OKFHMN_21450 | yfhH | MurR/RpiR family transcriptional regulator | cofit | 29 | 72 |
| | Escherichia coli ECRC101 | MCAODC_11980 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 29 | 72 |
| | Escherichia coli ECRC102 | NIAGMN_19220 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 29 | 72 |
| | Escherichia coli ECRC62 | BNILDI_11925 | yfhH | MurR/RpiR family transcriptional regulator | cofit | 29 | 72 |
| | Escherichia coli ECRC98 | JDDGAC_25115 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 29 | 72 |
| | Escherichia coli ECRC99 | KEDOAH_06770 | yfhH | MurR/RpiR family transcriptional regulator | no data | 29 | 72 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01146 | | HTH-type transcriptional regulator MurR | insig. | 29 | 72 |
| | Escherichia coli BW25113 | b2561 | yfhH | orf, hypothetical protein (VIMSS) | insig. | 29 | 72 |
| | Rahnella sp. WP5 | EX31_RS20760 | | MurR/RpiR family transcriptional regulator | cofit | 25 | 85 |
| | Escherichia fergusonii Becca | EFB2_04801 | | putative HTH-type transcriptional regulator YbbH | insig. | 27 | 83 |
| | Escherichia fergusonii Becca | EFB2_01335 | | HTH-type transcriptional regulator MurR | insig. | 28 | 72 |
| | Escherichia coli ECOR38 | HEPCGN_20595 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 28 | 72 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS14490 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 72 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14800 | | MurR/RpiR family transcriptional regulator | cofit | 27 | 95 |
| | Rahnella sp. WP5 | EX31_RS07935 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 80 |
| | Rahnella sp. WP5 | EX31_RS09220 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 91 |
| | Serratia liquefaciens MT49 | IAI46_09240 | | SIS domain-containing protein | insig. | 29 | 76 |
| | Erwinia amylovora T8 | OLJFJH_10280 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 83 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22020 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 83 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0085 | | transcriptional regulator, RpiR family | insig. | 26 | 95 |
| | Pantoea sp. MT58 | IAI47_04910 | | MurR/RpiR family transcriptional regulator | strong | 27 | 95 |
| | Bifidobacterium breve UCC2003 | BBR_RS13225 | | MurR/RpiR family transcriptional regulator | sig. | 26 | 95 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_02995 | | MurR/RpiR family transcriptional regulator | cofit | 26 | 91 |
| | Erwinia tracheiphila SCR3 | LU632_RS18000 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 91 |
| | Enterobacter sp. TBS_079 | MPMX20_03432 | | HTH-type transcriptional regulator MurR | insig. | 24 | 95 |
| | Rahnella sp. WP5 | EX31_RS12845 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 83 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17250 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 82 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00230 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 76 |
| | Ralstonia solanacearum UW163 | UW163_RS13560 | | MurR/RpiR family transcriptional regulator | no data | 28 | 76 |
| | Variovorax sp. SCN45 | GFF1217 | | Transcriptional regulator RpiR in protein degradation cluster | insig. | 28 | 95 |
| | Bosea sp. OAE506 | ABIE41_RS16720 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 77 |
| | Ralstonia solanacearum GMI1000 | RS_RS06905 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 82 |
| | Serratia liquefaciens MT49 | IAI46_12790 | | MurR/RpiR family transcriptional regulator | cofit | 26 | 73 |
| | Variovorax sp. OAS795 | ABID97_RS15420 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS13700 | | MurR/RpiR family transcriptional regulator | sig. | 25 | 85 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13500 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 88 |
| | Klebsiella michiganensis M5al | BWI76_RS09725 | | MurR/RpiR family transcriptional regulator | sig. | 26 | 71 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15910 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 73 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12005 | | transcriptional regulator | insig. | 25 | 77 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2952 | | transcriptional regulator, RpiR family | insig. | 25 | 74 |
| | Enterobacter sp. TBS_079 | MPMX20_03759 | | HTH-type transcriptional regulator GlvR | cofit | 25 | 73 |
| | Rhizobium sp. OAE497 | ABIE40_RS17275 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS23850 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 74 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_04335 | | transcriptional regulator | insig. | 24 | 74 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS18245 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 74 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11695 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 76 |
| | Pantoea sp. MT58 | IAI47_03790 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 73 |
| | Escherichia fergusonii Becca | EFB2_00784 | | hypothetical protein | insig. | 25 | 91 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS17460 | | MurR/RpiR family transcriptional regulator | cofit | 25 | 91 |
| | Escherichia coli ECRC100 | OKFHMN_18860 | rpiR | MurR/RpiR family transcriptional regulator | cofit | 25 | 91 |
| | Escherichia coli ECRC101 | MCAODC_09375 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 25 | 91 |
| | Escherichia coli ECRC102 | NIAGMN_16625 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 25 | 91 |
| | Escherichia coli ECRC98 | JDDGAC_22495 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 25 | 91 |
| | Escherichia coli ECRC99 | KEDOAH_09285 | rpiR | MurR/RpiR family transcriptional regulator | no data | 25 | 91 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09180 | | transcriptional regulator | insig. | 25 | 84 |
| | Sinorhizobium meliloti 1021 | SMc02353 | | hypothetical protein | insig. | 42 | 22 |
| | Pectobacterium carotovorum WPP14 | HER17_RS14445 | | MurR/RpiR family transcriptional regulator | cofit | 24 | 77 |
| | Fusobacterium nucleatum SB010 | HUW76_09985 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 45 |
| | Dickeya dadantii 3937 | DDA3937_RS03665 | | MurR/RpiR family transcriptional regulator | sig. | 23 | 90 |
| | Enterobacter sp. TBS_079 | MPMX20_03871 | | hypothetical protein | insig. | 27 | 60 |
| | Serratia liquefaciens MT49 | IAI46_24010 | | MurR/RpiR family transcriptional regulator | strong | 27 | 77 |
| | Pantoea sp. MT58 | IAI47_01475 | | MurR/RpiR family transcriptional regulator | strong | 23 | 91 |
| | Agrobacterium fabrum C58 | Atu4514 | | RpiR family transcriptional regulator | strong | 22 | 71 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS17985 | | MurR/RpiR family transcriptional regulator | strong | 23 | 89 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_12345 | rpiR | transcriptional regulator | insig. | 26 | 85 |
| | Erwinia amylovora T8 | OLJFJH_04440 | | MurR/RpiR family transcriptional regulator | strong | 26 | 89 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3062 | | transcriptional regulator, RpiR family | insig. | 26 | 60 |
| | Pseudomonas sp. SVBP6 | COO64_RS08420 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_04002 | | HTH-type transcriptional regulator MurR | insig. | 24 | 92 |
| | Klebsiella michiganensis M5al | BWI76_RS02940 | | RpiR family transcriptional regulator | insig. | 23 | 76 |