| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF4271 | | Transcriptional regulator, LysR family | no data | 100 | 100 |
| | Variovorax sp. SCN45 | GFF7108 | | Transcriptional regulator, LysR family | no data | 53 | 93 |
| | Variovorax sp. SCN45 | GFF6267 | | Transcriptional regulator, LysR family | no data | 39 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_02886 | | HTH-type transcriptional regulator CynR | insig. | 33 | 94 |
| | Sinorhizobium meliloti 1021 | SM_b20123 | | transcriptional regulator | insig. | 31 | 92 |
| | Rhodospirillum rubrum S1H | Rru_A1466 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 33 | 95 |
| | Dickeya dadantii 3937 | DDA3937_RS07805 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Variovorax sp. SCN45 | GFF5502 | | Transcriptional regulator, LysR family | insig. | 30 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS27955 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Rahnella sp. WP5 | EX31_RS20145 | | LysR family transcriptional regulator | insig. | 28 | 93 |
| | Pseudomonas putida KT2440 | PP_2054 | | putative DNA-binding transcriptional regulator | sig. | 29 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4938 | | Transcriptional regulators, LysR family | insig. | 31 | 93 |
| | Bosea sp. OAE506 | ABIE41_RS12415 | | LysR family transcriptional regulator | insig. | 32 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS22305 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05098 | | DNA-binding transcriptional regulator, LysR family | insig. | 29 | 93 |
| | Pseudomonas sp. RS175 | PFR28_01942 | | HTH-type transcriptional regulator CynR | strong | 29 | 92 |
| | Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 30 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14945 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14945 | | LysR family transcriptional regulator | strong | 30 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS20555 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| | Variovorax sp. OAS795 | ABID97_RS01765 | | LysR family transcriptional regulator | sig. | 29 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23130 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08035 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Agrobacterium fabrum C58 | Atu4264 | | LysR family transcriptional regulator | strong | 29 | 93 |
| | Escherichia coli ECOR27 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Azospirillum sp. SherDot2 | MPMX19_03557 | | HTH-type transcriptional regulator CynR | insig. | 30 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28895 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Escherichia fergusonii Becca | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 91 |
| | Escherichia coli ECOR38 | HEPCGN_01605 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Escherichia coli ECRC100 | OKFHMN_06670 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Escherichia coli ECRC101 | MCAODC_25890 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Escherichia coli ECRC102 | NIAGMN_04720 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Escherichia coli ECRC62 | BNILDI_21095 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Escherichia coli ECRC98 | JDDGAC_10325 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 91 |
| | Escherichia coli ECRC99 | KEDOAH_21295 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | no data | 28 | 91 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02945 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 91 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS04090 | | LysR family transcriptional regulator | no data | 28 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_001823 | | DNA-binding transcriptional LysR family regulator | insig. | 28 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21345 | | LysR family transcriptional regulator | insig. | 28 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21345 | | LysR family transcriptional regulator | sig. | 28 | 94 |
| | Escherichia coli BW25113 | b0768 | ybhD | predicted DNA-binding transcriptional regulator (RefSeq) | insig. | 28 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS04365 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| | Serratia liquefaciens MT49 | IAI46_18415 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4462 | | LysR family transcriptional regulator YbhD | insig. | 29 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_004438 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 93 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28100 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| | Pseudomonas sp. DMC3 | GFF998 | | HTH-type transcriptional regulator CynR | cofit | 27 | 95 |
| | Pseudomonas simiae WCS417 | PS417_19375 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3058 | | LysR family transcriptional regulator YbhD | insig. | 30 | 93 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28540 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1707 | | Transcriptional regulator | insig. | 28 | 93 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04078 | | HTH-type transcriptional regulator CynR | cofit | 28 | 94 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF17 | | LysR family transcriptional regulator YfeR | insig. | 31 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS07690 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Variovorax sp. SCN45 | GFF6826 | | Transcriptional regulator, LysR family | no data | 33 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03809 | | transcriptional regulator, LysR family | insig. | 32 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2179 | | LysR family transcriptional regulator YbhD | insig. | 30 | 94 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13660 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20345 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17035 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| | Enterobacter sp. TBS_079 | MPMX20_01913 | | HTH-type transcriptional regulator GltC | insig. | 28 | 93 |
| | Pseudomonas orientalis W4I3 | QF045_RS21370 | | LysR family transcriptional regulator | cofit | 28 | 94 |
| | Enterobacter sp. TBS_079 | MPMX20_03302 | | HTH-type transcriptional regulator CynR | insig. | 29 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02618 | | transcriptional regulator, LysR family | insig. | 28 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02876 | | transcriptional regulator, LysR family | no data | 30 | 93 |
| | Erwinia amylovora T8 | OLJFJH_10895 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07340 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| | Escherichia coli ECRC100 | OKFHMN_22230 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 93 |
| | Escherichia coli ECRC101 | MCAODC_12760 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 93 |
| | Escherichia coli ECRC98 | JDDGAC_26180 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 93 |
| | Escherichia coli ECRC99 | KEDOAH_05990 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | no data | 28 | 93 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21655 | | LysR family transcriptional regulator | insig. | 28 | 93 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_27930 | | LysR family transcriptional regulator | strong | 27 | 94 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12920 | | LysR family transcriptional regulator | no data | 24 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10590 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10590 | | LysR family transcriptional regulator | sig. | 27 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_005918 | | DNA-binding transcriptional LysR family regulator | insig. | 30 | 93 |
| | Escherichia coli BL21 | ECD_02308 | | transcriptional regulator of yefH | insig. | 28 | 93 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01315 | | HTH-type transcriptional regulator CynR | insig. | 28 | 93 |
| | Escherichia coli ECOR27 | NOLOHH_18985 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| | Escherichia coli ECRC62 | BNILDI_17470 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| | Pseudomonas sp. RS175 | PFR28_01326 | | HTH-type transcriptional regulator GltC | sig. | 27 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2180 | | transcriptional regulator, LysR family | sig. | 27 | 92 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2180 | | transcriptional regulator, LysR family | insig. | 27 | 92 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23720 | | LysR family transcriptional regulator | no data | 27 | 93 |
| | Pseudomonas sp. RS175 | PFR28_01830 | | HTH-type transcriptional regulator CynR | insig. | 29 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02200 | | HTH-type transcriptional regulator CynR | cofit | 27 | 93 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS13840 | | LysR family transcriptional regulator | no data | 28 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS11710 | | LysR substrate-binding domain-containing protein | no data | 28 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5605 | | LysR family regulatory protein | no data | 26 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03425 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Escherichia fergusonii Becca | EFB2_01468 | | HTH-type transcriptional regulator CynR | insig. | 28 | 93 |
| | Escherichia coli ECOR27 | NOLOHH_13910 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 93 |
| | Escherichia coli ECRC62 | BNILDI_12775 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 93 |
| | Escherichia coli BW25113 | b2409 | yfeR | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 28 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2110 | | LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase | insig. | 28 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5832 | | LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase | no data | 27 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_27455 | | LysR family transcriptional regulator | insig. | 27 | 93 |
| | Pseudomonas simiae WCS417 | PS417_10530 | | LysR family transcriptional regulator | sig. | 27 | 95 |
| | Pseudomonas segetis P6 | ACVTMO_RS13895 | | LysR family transcriptional regulator | insig. | 28 | 94 |