| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Variovorax sp. SCN45 | GFF3233 | | hypothetical protein | no data | 100 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_09630 | | transcriptional regulator | no data | 32 | 84 |
| o | Escherichia coli ECRC98 | JDDGAC_13255 | | transcriptional regulator | no data | 32 | 84 |
| | Marinobacter adhaerens HP15 | HP15_3106 | | phage repressor | no data | 32 | 79 |
| o | Escherichia coli ECRC101 | MCAODC_14835 | | HTH cro/C1-type domain-containing protein | no data | 30 | 83 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0352 | | putative phage repressor (RefSeq) | no data | 36 | 54 |
| | Sphingobium sp. HT1-2 | GFF612 | | putative phage repressor | no data | 34 | 67 |
| | Klebsiella michiganensis M5al | BWI76_RS15805 | | hypothetical protein | no data | 33 | 75 |
| o | Pseudomonas sp. RS175 | PFR28_02698 | | HTH-type transcriptional regulator PrtR | no data | 28 | 83 |
| | Shewanella oneidensis MR-1 | SO2652 | | prophage MuSo2, transcriptional regulator, Cro/CI family (NCBI ptt file) | no data | 29 | 79 |
| | Shewanella oneidensis MR-1 | SO0641 | | prophage MuSo1, transcriptional regulator, Cro/CI family (NCBI ptt file) | no data | 30 | 56 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS01095 | | hypothetical protein | insig. | 39 | 43 |
| | Pseudomonas sp. SVBP6 | COO64_RS08775 | | S24 family peptidase | insig. | 36 | 53 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1674 | | transcriptional regulator, putative (TIGR) | no data | 30 | 68 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0710 | | putative phage repressor (RefSeq) | no data | 25 | 86 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1261 | | putative phage repressor (RefSeq) | no data | 33 | 56 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2686 | | peptidase, S24 family (TIGR) | no data | 30 | 57 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_26340 | | hypothetical protein | no data | 33 | 56 |
| | Escherichia coli ECRC98 | JDDGAC_27735 | | HTH cro/C1-type domain-containing protein | no data | 34 | 52 |
| | Escherichia coli ECOR27 | NOLOHH_00685 | | HTH cro/C1-type domain-containing protein | no data | 34 | 52 |
| o | Erwinia tracheiphila SCR3 | LU632_RS15100 | | helix-turn-helix transcriptional regulator | no data | 27 | 84 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS10625 | | XRE family transcriptional regulator | no data | 25 | 86 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1144 | | transcriptional regulator, Cro/CI family (TIGR) | no data | 28 | 56 |
| | Klebsiella michiganensis M5al | BWI76_RS12735 | | phage repressor protein | insig. | 32 | 52 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2633 | | transcriptional regulator, putative (TIGR) | no data | 30 | 56 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS07925 | alpR;inference=COORDINATES | transcriptional regulator AlpR | no data | 28 | 84 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_04055 | | transcriptional regulator AlpR | no data | 28 | 84 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS44875 | alpR;inference=COORDINATES | transcriptional regulator AlpR | no data | 28 | 84 |
| | Rhodospirillum rubrum S1H | Rru_A1024 | | phage repressor (NCBI) | insig. | 37 | 37 |
| | Shewanella oneidensis MR-1 | SO2990 | | prophage LambdaSo, transcriptional regulator, Cro/CI family (NCBI ptt file) | no data | 30 | 62 |
| o | Rahnella sp. WP5 | EX31_RS01745 | | helix-turn-helix transcriptional regulator | no data | 26 | 87 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23085 | prtR;inference=COORDINATES | transcriptional regulator PrtR | no data | 25 | 84 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22355 | | HTH-type transcriptional regulator PrtR | no data | 25 | 84 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36265 | prtR;inference=COORDINATES | transcriptional regulator PrtR | no data | 25 | 84 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10280 | | LexA family transcriptional regulator | no data | 25 | 68 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1094 | | putative phage repressor (RefSeq) | no data | 27 | 56 |
| | Pseudomonas sp. S08-1 | OH686_19375 | | Phage repressor protein cI | no data | 31 | 54 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_21390 | | Helix-turn-helix transcriptional regulator | no data | 28 | 84 |
| | Erwinia tracheiphila SCR3 | LU632_RS14255 | | helix-turn-helix transcriptional regulator | no data | 28 | 84 |
| | Serratia liquefaciens MT49 | IAI46_17130 | | helix-turn-helix transcriptional regulator | insig. | 32 | 60 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22040 | | S24 family peptidase | no data | 29 | 62 |
| | Methylophilus sp. DMC18 | GFF2350 | | putative HTH-type transcriptional regulator | no data | 25 | 59 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_15100 | | 26 kDa repressor protein | no data | 34 | 51 |
| | Marinobacter adhaerens HP15 | HP15_685 | | phage repressor | no data | 29 | 55 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_00290 | | Helix-turn-helix | no data | 24 | 86 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS07035 | | S24 family peptidase | no data | 26 | 86 |
| | Serratia liquefaciens MT49 | IAI46_13755 | | helix-turn-helix transcriptional regulator | no data | 30 | 54 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_15185 | | transcriptional regulator | insig. | 26 | 85 |
| | Rhodospirillum rubrum S1H | Rru_A0717 | | phage repressor (NCBI) | insig. | 27 | 84 |
| | Pseudomonas sp. DMC3 | GFF833 | | hypothetical protein | no data | 31 | 55 |
| | Serratia liquefaciens MT49 | IAI46_15200 | | helix-turn-helix transcriptional regulator | no data | 30 | 51 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS23125 | | XRE family transcriptional regulator | strong | 34 | 27 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS26340 | | helix-turn-helix transcriptional regulator | cofit | 45 | 23 |
| | Pantoea sp. MT58 | IAI47_15110 | | chromophore lyase | strong | 31 | 34 |
| | Shewanella oneidensis MR-1 | SO3867 | | transcriptional regulator, Cro/CI family (NCBI ptt file) | insig. | 40 | 26 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16215 | | XRE family transcriptional regulator | cofit | 32 | 27 |
| | Ralstonia solanacearum UW163 | UW163_RS16950 | | XRE family transcriptional regulator | insig. | 32 | 27 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_06600 | | transcriptional regulator | sig. | 30 | 50 |
| | Rhizobium sp. OAE497 | ABIE40_RS01060 | | XRE family transcriptional regulator | insig. | 44 | 24 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4971 | | Transcriptional regulator | insig. | 25 | 85 |
| | Fusobacterium nucleatum SB010 | HUW76_09700 | | helix-turn-helix transcriptional regulator | no data | 22 | 85 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS10050 | | chromophore lyase | cofit | 31 | 34 |
| | Dickeya dadantii 3937 | DDA3937_RS21910 | | helix-turn-helix transcriptional regulator | insig. | 42 | 26 |
| | Dickeya dianthicola 67-19 | HGI48_RS08550 | | helix-turn-helix transcriptional regulator | insig. | 42 | 26 |
| | Alteromonas macleodii MIT1002 | MIT1002_02112 | | anaerobic benzoate catabolism transcriptional regulator | insig. | 39 | 28 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3368 | | Predicted transcriptional regulator | strong | 26 | 78 |
| | Escherichia coli ECRC100 | OKFHMN_11715 | hipB | Transcriptional regulator, contains XRE-family HTH domain | cofit | 43 | 23 |
| | Escherichia coli ECRC101 | MCAODC_02230 | hipB | Transcriptional regulator, contains XRE-family HTH domain | insig. | 43 | 23 |
| | Escherichia coli ECRC102 | NIAGMN_09565 | hipB | Transcriptional regulator, contains XRE-family HTH domain | insig. | 43 | 23 |
| | Escherichia coli ECRC99 | KEDOAH_16430 | hipB | Transcriptional regulator, contains XRE-family HTH domain | no data | 43 | 23 |
| | Pseudomonas sp. SVBP6 | COO64_RS21060 | | helix-turn-helix domain-containing protein | insig. | 36 | 29 |
| | Escherichia coli ECRC101 | MCAODC_13220 | | phage repressor protein C | no data | 34 | 31 |
| | Pseudomonas sp. DMC3 | GFF3850 | | HTH-type transcriptional regulator PrtR | insig. | 32 | 37 |
| | Pectobacterium carotovorum WPP14 | HER17_RS03720 | | XRE family transcriptional regulator | insig. | 37 | 28 |
| | Pseudomonas simiae WCS417 | PS417_09985 | | propanediol utilization protein | no data | 31 | 55 |
| | Shewanella loihica PV-4 | Shew_1266 | | XRE family transcriptional regulator (RefSeq) | insig. | 40 | 23 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS05700 | | hypothetical protein | insig. | 39 | 26 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0623 | | Peptidase S24, S26A and S26B | insig. | 34 | 38 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0623 | | Peptidase S24, S26A and S26B | insig. | 34 | 38 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS07485 | | XRE family transcriptional regulator | insig. | 34 | 27 |
| | Enterobacter sp. TBS_079 | MPMX20_03983 | | hypothetical protein | insig. | 32 | 27 |
| | Methylophilus sp. DMC18 | GFF507 | | hypothetical protein | cofit | 41 | 27 |
| | Pseudomonas stutzeri RCH2 | Psest_3408 | | Predicted transcriptional regulators | sig. | 39 | 30 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02080 | | hypothetical protein | no data | 33 | 36 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3219 | | Transcriptional regulator, Cro/CI family | insig. | 40 | 21 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21935 | | helix-turn-helix domain-containing protein | sig. | 33 | 28 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3141 | | transcriptional regulator, XRE family with cupin sensor | insig. | 32 | 27 |
| | Pseudomonas putida KT2440 | PP_3772 | | Repressor protein-related protein | no data | 29 | 73 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2665 | | Transcriptional regulator | sig. | 26 | 53 |
| | Agrobacterium fabrum C58 | Atu4226 | | transcriptional regulator | sig. | 39 | 26 |
| | Pseudomonas sp. RS175 | PFR28_03894 | | HTH-type transcriptional regulator PrtR | insig. | 26 | 85 |
| | Variovorax sp. OAS795 | ABID97_RS13245 | | XRE family transcriptional regulator | insig. | 43 | 24 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5317 | | putative phage repressor | no data | 34 | 34 |
| | Variovorax sp. OAS795 | ABID97_RS07740 | | helix-turn-helix transcriptional regulator | insig. | 44 | 22 |
| | Pseudomonas sp. BP01 | JOY50_RS12830 | | helix-turn-helix domain-containing protein | insig. | 39 | 27 |
| | Pseudomonas putida KT2440 | PP_2181 | | Transcriptional regulator, Cro/CI family | strong | 39 | 27 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS11685 | | transcription factor | no data | 37 | 30 |
| | Pseudomonas sp. BP01 | JOY50_RS05765 | | helix-turn-helix domain-containing protein | no data | 36 | 30 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01081 | | hypothetical protein | insig. | 43 | 21 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33920 | | XRE family transcriptional regulator | strong | 43 | 23 |