| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_15460 | | GntR family transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS17445 | | LacI family DNA-binding transcriptional regulator | insig. | 96 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17445 | | LacI family DNA-binding transcriptional regulator | insig. | 96 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03490 | | Ribose operon repressor | cofit | 92 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_4696 | | transcriptional regulator, LacI family | insig. | 81 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4696 | | transcriptional regulator, LacI family | insig. | 81 | 100 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15110 | | substrate-binding domain-containing protein | insig. | 53 | 97 |
| o | Pantoea sp. MT58 | IAI47_05220 | | substrate-binding domain-containing protein | insig. | 51 | 97 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS27820 | | GntR family transcriptional regulator | insig. | 48 | 90 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS02985 | | transcriptional regulator | insig. | 44 | 96 |
| o | Ralstonia solanacearum GMI1000 | RS_RS09035 | | LacI family DNA-binding transcriptional regulator | insig. | 45 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_04071 | | Catabolite control protein A | insig. | 42 | 96 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS16480 | | LacI family DNA-binding transcriptional regulator | insig. | 44 | 96 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00990 | | LacI family transcriptional regulator | insig. | 47 | 86 |
| o | Ralstonia solanacearum UW163 | UW163_RS14300 | | LacI family transcriptional regulator | insig. | 47 | 86 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS12445 | | LacI family DNA-binding transcriptional regulator | insig. | 43 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS05565 | | LacI family DNA-binding transcriptional regulator | insig. | 40 | 96 |
| o | Variovorax sp. SCN45 | GFF6056 | | Transcriptional regulator, LacI family | insig. | 40 | 99 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002835 | | DNA-binding LacI/PurR family transcriptional regulator | sig. | 40 | 95 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00419 | | transcriptional regulator, LacI family | insig. | 39 | 98 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS13105 | | LacI family transcription regulator | insig. | 40 | 91 |
| o | Xanthobacter sp. DMC5 | GFF4012 | | HTH-type transcriptional regulator GntR | insig. | 40 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS35910 | | LacI family DNA-binding transcriptional regulator | insig. | 34 | 84 |
| | Pseudomonas orientalis W4I3 | QF045_RS20540 | | LacI family DNA-binding transcriptional regulator | insig. | 35 | 91 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03908 | | HTH-type transcriptional repressor PurR | cofit | 34 | 91 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4095 | | Transcriptional regulator, LacI family | no data | 34 | 91 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | insig. | 34 | 91 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | sig. | 34 | 91 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2154 | | transcriptional regulator, LacI family | sig. | 34 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2154 | | transcriptional regulator, LacI family | insig. | 34 | 95 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c07800 | | putative transcriptional regulator, lacI family | strong | 33 | 91 |
| | Pseudomonas simiae WCS417 | PS417_18390 | | LacI family transcriptional regulator | strong | 33 | 91 |
| | Pseudomonas sp. DMC3 | GFF900 | | HTH-type transcriptional repressor PurR | cofit | 33 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_6032 | | Ribose operon repressor | insig. | 34 | 91 |
| | Pseudomonas sp. SVBP6 | COO64_RS10340 | | LacI family DNA-binding transcriptional regulator | insig. | 33 | 97 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS07410 | | LacI family DNA-binding transcriptional regulator | insig. | 33 | 89 |
| | Xanthobacter sp. DMC5 | GFF4087 | | HTH-type transcriptional repressor CytR | insig. | 36 | 91 |
| | Erwinia amylovora T8 | OLJFJH_05415 | | ribose operon transcriptional repressor RbsR | insig. | 34 | 90 |
| o | Pseudomonas sp. RS175 | PFR28_02584 | | HTH-type transcriptional repressor CytR | insig. | 34 | 94 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_14670 | | transcriptional repressor PurR | insig. | 29 | 91 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2029 | | transcriptional regulator, LacI family (RefSeq) | sig. | 33 | 91 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS19225 | | LacI family transcriptional regulator | insig. | 32 | 93 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20830 | | LacI family transcriptional regulator | strong | 32 | 91 |
| | Azospirillum sp. SherDot2 | MPMX19_04765 | | HTH-type transcriptional repressor CytR | insig. | 31 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_164 | | Ribose operon repressor | strong | 33 | 91 |
| | Ralstonia solanacearum GMI1000 | RS_RS05020 | | LacI family transcriptional regulator | sig. | 33 | 93 |
| | Pseudomonas putida KT2440 | PP_2457 | | DNA-binding transcriptional repressor | strong | 33 | 91 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS28760 | | LacI family DNA-binding transcriptional regulator | strong | 33 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_09515 | | LacI family transcriptional regulator | sig. | 33 | 91 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS38245 | | LacI family DNA-binding transcriptional regulator | sig. | 33 | 91 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4029 | | transcriptional regulator, LacI family | strong | 33 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS04285 | | LacI family DNA-binding transcriptional regulator | insig. | 33 | 91 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14240 | | LacI family transcriptional regulator | strong | 32 | 93 |
| | Ralstonia solanacearum UW163 | UW163_RS11705 | | LacI family transcriptional regulator | insig. | 32 | 93 |
| | Pantoea sp. MT58 | IAI47_00375 | | ribose operon transcriptional repressor RbsR | strong | 32 | 90 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS18960 | | ribose operon transcriptional repressor RbsR | strong | 32 | 90 |
| | Alteromonas macleodii MIT1002 | MIT1002_00363 | | HTH-type transcriptional repressor CytR | cofit | 32 | 91 |
| | Escherichia fergusonii Becca | EFB2_04880 | | Ribose operon repressor | cofit | 33 | 91 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS21575 | | ribose operon transcriptional repressor RbsR | insig. | 33 | 91 |
| | Escherichia coli BW25113 | b3753 | rbsR | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | strong | 33 | 91 |
| | Pseudomonas sp. DMC3 | GFF1074 | | HTH-type transcriptional repressor CytR | insig. | 33 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_04614 | | Ribose operon repressor | strong | 33 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29910 | | LacI family transcriptional regulator | sig. | 32 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30000 | | LacI family transcriptional regulator | insig. | 33 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_322 | | Transcriptional regulator, LacI family | insig. | 33 | 91 |
| | Rahnella sp. WP5 | EX31_RS06195 | | ribose operon transcriptional repressor RbsR | cofit | 33 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_00955 | | LacI family transcriptional regulator | strong | 32 | 91 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_13525 | | DNA-binding transcriptional regulator CytR | cofit | 33 | 86 |
| | Escherichia coli ECOR27 | NOLOHH_06860 | rbsR | ribose operon transcriptional repressor RbsR | strong | 33 | 90 |
| | Escherichia coli ECOR38 | HEPCGN_13435 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 33 | 90 |
| | Escherichia coli ECRC100 | OKFHMN_14725 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 33 | 90 |
| | Escherichia coli ECRC101 | MCAODC_05230 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 33 | 90 |
| | Escherichia coli ECRC102 | NIAGMN_12480 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 33 | 90 |
| | Escherichia coli ECRC98 | JDDGAC_18345 | rbsR | ribose operon transcriptional repressor RbsR | insig. | 33 | 90 |
| | Escherichia coli ECRC99 | KEDOAH_13425 | rbsR | ribose operon transcriptional repressor RbsR | no data | 33 | 90 |
| | Dickeya dadantii 3937 | DDA3937_RS00055 | | ribose operon transcriptional repressor RbsR | strong | 32 | 91 |
| | Escherichia coli ECRC62 | BNILDI_04665 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 33 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS24770 | | LacI family DNA-binding transcriptional regulator | strong | 32 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22285 | | LacI family transcriptional regulator | no data | 33 | 91 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS09955 | | LacI family DNA-binding transcriptional regulator | strong | 32 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25305 | | LacI family DNA-binding transcriptional regulator | insig. | 35 | 90 |
| | Pseudomonas sp. RS175 | PFR28_02734 | | Ribose operon repressor | strong | 32 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS00295 | | transcriptional regulator RbsR | strong | 32 | 90 |
| | Pectobacterium carotovorum WPP14 | HER17_RS21525 | | ribose operon transcriptional repressor RbsR | strong | 32 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3909 | | Ribose operon repressor | strong | 32 | 89 |
| | Escherichia coli BL21 | ECD_03639 | | transcriptional repressor of ribose metabolism | insig. | 33 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS05680 | | LacI family transcriptional regulator | strong | 35 | 89 |
| | Agrobacterium fabrum C58 | Atu4373 | | LacI family transcriptional regulator | strong | 34 | 86 |
| | Serratia liquefaciens MT49 | IAI46_25050 | | ribose operon transcriptional repressor RbsR | strong | 32 | 91 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08900 | | ribose operon transcriptional repressor RbsR | sig. | 32 | 90 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00865 | | DNA-binding transcriptional regulator CytR | cofit | 30 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00103 | | transcriptional regulator, LacI family | insig. | 33 | 90 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00040 | | LacI family DNA-binding transcriptional regulator | cofit | 31 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS35850 | | LacI family DNA-binding transcriptional regulator | strong | 30 | 99 |
| | Escherichia coli BL21 | ECD_03819 | | Anti-activator for CytR-CRP nucleoside utilization regulon | sig. | 29 | 90 |
| | Escherichia coli ECOR27 | NOLOHH_05870 | cytR | DNA-binding transcriptional regulator CytR | cofit | 29 | 90 |
| | Escherichia coli ECOR38 | HEPCGN_12370 | cytR | DNA-binding transcriptional regulator CytR | insig. | 29 | 90 |
| | Escherichia coli ECRC100 | OKFHMN_13725 | cytR | DNA-binding transcriptional regulator CytR | cofit | 29 | 90 |
| | Escherichia coli ECRC101 | MCAODC_04225 | cytR | DNA-binding transcriptional regulator CytR | insig. | 29 | 90 |
| | Escherichia coli ECRC102 | NIAGMN_11480 | cytR | DNA-binding transcriptional regulator CytR | cofit | 29 | 90 |