Homologs of GFF2938 from Xanthobacter sp. DMC5

putative HTH-type transcriptional regulator YxaF
SEED: transcriptional regulator, TetR family

170 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2938 putative HTH-type transcriptional regulator YxaF insig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_005690 TetR/AcrR family transcriptional regulator insig. 69 96
o Rhizobium sp. OAE497 ABIE40_RS13695 TetR/AcrR family transcriptional regulator insig. 63 97
o Agrobacterium fabrum C58 Atu5386 TetR family transcriptional regulator no data 64 98
o Herbaspirillum seropedicae SmR1 HSERO_RS16900 TetR family transcriptional regulator no data 58 98
o Cellulophaga baltica 18 M666_RS15970 TetR/AcrR family transcriptional regulator insig. 33 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08645 TetR/AcrR family transcriptional regulator cofit 35 77
  Cupriavidus basilensis FW507-4G11 RR42_RS11290 TetR family transcriptional regulator insig. 31 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2489 Transcriptional regulator, TetR family insig. 33 84
  Pseudomonas stutzeri RCH2 Psest_0749 Transcriptional regulator insig. 30 97
  Pseudomonas aeruginosa PA14 IKLFDK_05860 TetR family transcriptional regulator sig. 28 92
  Mycobacterium tuberculosis H37Rv Rv0196 Possible transcriptional regulatory protein insig. 30 81
  Variovorax sp. SCN45 GFF4250 Transcriptional regulator, AcrR family insig. 32 80
  Ralstonia solanacearum GMI1000 RS_RS20920 TetR/AcrR family transcriptional regulator insig. 30 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_945 Transcriptional regulator, TetR family strong 29 88
  Phaeobacter inhibens DSM 17395 PGA1_c17200 transcriptional regulator, TetR family sig. 39 39
  Ralstonia solanacearum PSI07 RPSI07_RS03280 TetR/AcrR family transcriptional regulator insig. 31 83
  Pseudomonas sp. RS175 PFR28_02952 hypothetical protein insig. 27 93
  Erwinia amylovora T8 OLJFJH_15830 HTH-type transcriptional regulator RutR insig. 35 52
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS12590 rutR HTH-type transcriptional regulator RutR cofit 30 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21100 TetR/AcrR family transcriptional regulator insig. 30 81
  Bosea sp. OAE506 ABIE41_RS18960 TetR/AcrR family transcriptional regulator insig. 31 85
  Rhodopseudomonas palustris CGA009 TX73_010135 TetR/AcrR family transcriptional regulator sig. 41 42
  Rhizobium sp. OAE497 ABIE40_RS21130 TetR/AcrR family transcriptional regulator cofit 30 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18275 TetR/AcrR family transcriptional regulator strong 30 92
  Herbaspirillum seropedicae SmR1 HSERO_RS06805 transcriptional regulator insig. 53 30
  Dickeya dianthicola 67-19 HGI48_RS10740 TetR/AcrR family transcriptional regulator strong 37 47
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1792.1 Transcription regulator of multidrug efflux pump operon, TetR (AcrR) family strong 44 35
  Pseudomonas syringae pv. syringae B728a Psyr_2754 regulatory protein, TetR insig. 30 64
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2754 regulatory protein, TetR insig. 30 64
  Pantoea sp. MT58 IAI47_12505 HTH-type transcriptional regulator RutR insig. 29 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4204 transcriptional regulator, TetR family strong 46 30
  Serratia liquefaciens MT49 IAI46_09055 HTH-type transcriptional regulator RutR insig. 38 44
  Herbaspirillum seropedicae SmR1 HSERO_RS16340 transcriptional regulator sig. 33 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS07270 TetR/AcrR family transcriptional regulator insig. 26 91
  Kangiella aquimarina DSM 16071 B158DRAFT_0454 transcriptional regulator, TetR family sig. 25 71
  Cupriavidus basilensis FW507-4G11 RR42_RS31560 TetR family transcriptional regulator no data 34 97
  Erwinia amylovora T8 OLJFJH_14170 TetR family transcriptional regulator insig. 43 31
  Pseudomonas aeruginosa MRSN321 DY961_RS17735 TetR/AcrR family transcriptional regulator no data 40 39
  Pseudomonas aeruginosa PA14 IKLFDK_11140 TetR family transcriptional regulator no data 40 39
  Pseudomonas aeruginosa PUPa3 DQ20_RS39960 TetR/AcrR family transcriptional regulator strong 40 39
  Burkholderia phytofirmans PsJN BPHYT_RS32400 TetR family transcriptional regulator insig. 28 87
  Pseudomonas syringae pv. syringae B728a Psyr_3347 transcriptional regulator, TetR family sig. 27 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3347 transcriptional regulator, TetR family insig. 27 78
  Bosea sp. OAE506 ABIE41_RS14050 TetR/AcrR family transcriptional regulator insig. 30 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3621 HTH-type transcriptional regulator BetI insig. 33 62
  Acidovorax sp. GW101-3H11 Ac3H11_1911 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family strong 31 82
  Rahnella sp. WP5 EX31_RS24095 HTH-type transcriptional regulator RutR insig. 24 97
  Variovorax sp. OAS795 ABID97_RS13270 TetR/AcrR family transcriptional regulator insig. 30 84
  Rhizobium sp. OAE497 ABIE40_RS23000 TetR/AcrR family transcriptional regulator strong 28 88
  Rhizobium sp. OAE497 ABIE40_RS14135 TetR/AcrR family transcriptional regulator strong 29 87
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11490 TetR/AcrR family transcriptional regulator strong 25 98
  Variovorax sp. SCN45 GFF4224 Transcriptional regulator, AcrR family insig. 28 81
  Pseudomonas fluorescens FW300-N2C3 AO356_11545 transcriptional regulator insig. 32 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3299 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) insig. 33 53
  Ralstonia solanacearum PSI07 RPSI07_RS03375 TetR/AcrR family transcriptional regulator strong 40 30
  Azospirillum sp. SherDot2 MPMX19_05806 HTH-type transcriptional regulator RutR insig. 36 45
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00861 HTH-type transcriptional regulator RutR cofit 29 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS21655 TetR/AcrR family transcriptional regulator cofit 26 90
  Pseudomonas fluorescens FW300-N2E3 AO353_29185 TetR family transcriptional regulator sig. 34 47
  Pectobacterium carotovorum WPP14 HER17_RS08755 TetR/AcrR family transcriptional regulator insig. 43 33
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19810 TetR/AcrR family transcriptional regulator sig. 40 30
  Ralstonia solanacearum GMI1000 RS_RS21015 TetR/AcrR family transcriptional regulator sig. 40 30
  Ralstonia solanacearum UW163 UW163_RS19365 TetR/AcrR family transcriptional regulator insig. 40 30
  Pseudomonas putida KT2440 PP_3960 Transcriptional regulator, TetR family sig. 38 35
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS21810 TetR/AcrR family transcriptional regulator no data 34 51
  Bacteroides thetaiotaomicron VPI-5482 BT0507 transcriptional regulator (TetR/AcrR family) (NCBI ptt file) sig. 34 35
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05520 transcriptional regulator, TetR family sig. 29 79
  Azospirillum sp. SherDot2 MPMX19_03530 HTH-type transcriptional repressor NicS insig. 38 47
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17460 TetR/AcrR family transcriptional regulator strong 37 47
  Ralstonia solanacearum UW163 UW163_RS21690 TetR/AcrR family transcriptional regulator insig. 37 47
  Ralstonia solanacearum GMI1000 RS_RS23855 TetR/AcrR family transcriptional regulator sig. 37 48
  Pectobacterium carotovorum WPP14 HER17_RS13910 TetR/AcrR family transcriptional regulator cofit 34 47
  Dickeya dadantii 3937 DDA3937_RS10775 TetR/AcrR family transcriptional regulator cofit 33 47
  Escherichia coli BL21 ECD_01016 rut operon transcriptional repressor for no data 33 52
  Escherichia fergusonii Becca EFB2_03067 HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECOR27 NOLOHH_21510 rutR HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECOR38 HEPCGN_23530 rutR HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECRC100 OKFHMN_04610 rutR HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECRC101 MCAODC_23995 rutR HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECRC102 NIAGMN_23725 rutR HTH-type transcriptional regulator RutR no data 33 52
  Escherichia coli ECRC62 BNILDI_19675 rutR HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECRC98 JDDGAC_08220 rutR HTH-type transcriptional regulator RutR insig. 33 52
  Escherichia coli ECRC99 KEDOAH_23135 rutR HTH-type transcriptional regulator RutR no data 33 52
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02653 HTH-type transcriptional regulator RutR cofit 33 52
  Escherichia coli Nissle 1917 ECOLIN_RS05285 HTH-type transcriptional regulator RutR no data 33 52
  Escherichia coli BW25113 b1013 ycdC predicted DNA-binding transcriptional regulator (NCBI) sig. 33 52
  Pseudomonas fluorescens FW300-N2E3 AO353_24360 TetR family transcriptional regulator insig. 30 44
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4179 Transcriptional regulator, TetR family insig. 30 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS03280 TetR/AcrR family transcriptional regulator cofit 28 94
  Pseudomonas sp. SVBP6 COO64_RS09215 TetR/AcrR family transcriptional regulator insig. 28 44
  Agrobacterium fabrum C58 Atu0993 transcriptional regulator, TetR family insig. 27 91
  Pseudomonas simiae WCS417 PS417_03230 TetR family transcriptional regulator sig. 32 58
  Dinoroseobacter shibae DFL-12 Dshi_1874 transcriptional regulator, TetR family (RefSeq) insig. 33 78
  Pseudomonas fluorescens SBW25 PFLU_RS03310 TetR/AcrR family transcriptional regulator cofit 33 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03310 TetR/AcrR family transcriptional regulator insig. 33 62
  Pseudomonas orientalis W4I3 QF045_RS06270 TetR/AcrR family transcriptional regulator insig. 33 62
  Magnetospirillum magneticum AMB-1 AMB_RS09490 TetR/AcrR family transcriptional regulator cofit 26 82
  Xanthobacter sp. DMC5 GFF1747 hypothetical protein insig. 30 83
  Rhizobium sp. OAE497 ABIE40_RS29250 TetR/AcrR family transcriptional regulator insig. 30 79
  Variovorax sp. OAS795 ABID97_RS20245 TetR/AcrR family transcriptional regulator insig. 28 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3952 Transcriptional regulator, TetR family insig. 28 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0113 transcriptional regulator, TetR family insig. 37 44
  Pseudomonas fluorescens SBW25 PFLU_RS12415 TetR/AcrR family transcriptional regulator insig. 33 48
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12415 TetR/AcrR family transcriptional regulator strong 33 48
  Mycobacterium tuberculosis H37Rv Rv3295 Probable transcriptional regulatory protein (probably TetR-family) sig. 35 35
  Cupriavidus basilensis FW507-4G11 RR42_RS25535 TetR family transcriptional regulator insig. 32 87
  Sinorhizobium meliloti 1021 SMc04134 transcriptional regulator insig. 29 90
  Marinobacter adhaerens HP15 HP15_2117 transcriptional regulator, TetR family protein insig. 35 39
  Pseudomonas simiae WCS417 PS417_11675 TetR family transcriptional regulator no data 33 51
  Azospirillum sp. SherDot2 MPMX19_01839 HTH-type transcriptional regulator BetI insig. 48 24
  Pseudomonas protegens RBAN4 FABNJH_21165 tetR Transcriptional regulator, TetR family insig. 36 39
  Pseudomonas sp. SVBP6 COO64_RS08575 TetR/AcrR family transcriptional regulator insig. 32 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS20880 TetR/AcrR family transcriptional regulator insig. 28 70
  Pseudomonas aeruginosa MRSN321 DY961_RS22380 TetR/AcrR family transcriptional regulator insig. 51 20
  Pseudomonas aeruginosa PA14 IKLFDK_23050 TetR/AcrR family transcriptional regulator insig. 51 20
  Pseudomonas aeruginosa PUPa3 DQ20_RS36945 TetR/AcrR family transcriptional regulator insig. 51 20
  Azospirillum brasilense Sp245 AZOBR_RS05685 TetR family transcriptional regulator insig. 48 24
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) insig. 27 88
  Azospirillum brasilense Sp245 AZOBR_RS32745 TetR family transcriptional regulator strong 25 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU2819 transcriptional regulator, TetR family (TIGR) strong 45 21
  Pseudomonas sp. SVBP6 COO64_RS26400 TetR/AcrR family transcriptional regulator insig. 31 57
  Azospirillum sp. SherDot2 MPMX19_01215 hypothetical protein insig. 30 48
  Shewanella sp. ANA-3 Shewana3_0685 TetR family transcriptional regulator (RefSeq) insig. 27 82
  Azospirillum sp. SherDot2 MPMX19_03859 hypothetical protein insig. 26 88
  Marinobacter adhaerens HP15 HP15_3141 transcriptional regulator, TetR family insig. 25 84
  Paraburkholderia graminis OAS925 ABIE53_001846 TetR/AcrR family transcriptional repressor of nem operon strong 22 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05527 transcriptional regulator, TetR family insig. 43 30
  Ralstonia solanacearum PSI07 RPSI07_RS06190 TetR/AcrR family transcriptional regulator strong 36 47
  Variovorax sp. SCN45 GFF2769 Transcriptional regulator, AcrR family insig. 29 92
  Phaeobacter inhibens DSM 17395 PGA1_c12830 transcriptional regulator, TetR family strong 29 50
  Dickeya dadantii 3937 DDA3937_RS08305 TetR/AcrR family transcriptional regulator insig. 27 89
  Pseudomonas sp. DMC3 GFF1178 hypothetical protein insig. 28 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01945 TetR/AcrR family transcriptional regulator insig. 47 24
  Ralstonia solanacearum UW163 UW163_RS15255 TetR/AcrR family transcriptional regulator insig. 47 24
  Phaeobacter inhibens DSM 17395 PGA1_c26790 transcriptional regulator, TetR family sig. 37 25
  Sphingobium sp. HT1-2 GFF4834 Transcriptional regulator, AcrR family insig. 34 42
  Rhodopseudomonas palustris CGA009 TX73_015645 TetR/AcrR family transcriptional regulator insig. 32 78
  Sphingobium sp. HT1-2 GFF4059 Transcriptional regulator, AcrR family cofit 30 91
  Rhizobium sp. OAE497 ABIE40_RS23940 TetR/AcrR family transcriptional regulator strong 27 83
  Methylophilus sp. DMC18 GFF1805 HTH-type transcriptional repressor ComR insig. 55 20
  Rhizobium sp. OAE497 ABIE40_RS16840 TetR/AcrR family transcriptional regulator strong 27 71
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09900 TetR family transcriptional regulator sig. 26 98
  Rahnella sp. WP5 EX31_RS00510 TetR/AcrR family transcriptional regulator insig. 40 31
  Pseudomonas sp. S08-1 OH686_07330 Transcriptional regulator, AcrR family cofit 38 35
  Pseudomonas orientalis W4I3 QF045_RS23950 TetR/AcrR family transcriptional regulator cofit 36 39
  Pseudomonas simiae WCS417 PS417_17400 TetR family transcriptional regulator insig. 36 30
  Pseudomonas sp. RS175 PFR28_04609 hypothetical protein insig. 30 81
  Variovorax sp. OAS795 ABID97_RS05850 TetR/AcrR family transcriptional regulator strong 30 82
  Pseudomonas segetis P6 ACVTMO_RS05630 TetR/AcrR family transcriptional regulator sig. 29 58
  Pseudomonas protegens RBAN4 FABNJH_03780 HTH tetR-type domain-containing protein insig. 27 92
  Cupriavidus basilensis FW507-4G11 RR42_RS26920 TetR family transcriptional regulator insig. 32 34
  Enterobacter sp. TBS_079 MPMX20_02479 Transposon Tn10 TetC protein insig. 46 25
  Escherichia fergusonii Becca EFB2_04233 HTH-type transcriptional regulator BetI insig. 42 24
  Pseudomonas aeruginosa MRSN321 DY961_RS05380 TetR/AcrR family transcriptional regulator sig. 32 46
  Pseudomonas syringae pv. syringae B728a Psyr_0675 transcriptional regulator, TetR family insig. 28 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0675 transcriptional regulator, TetR family insig. 28 58
  Xanthobacter sp. DMC5 GFF271 HTH-type transcriptional repressor KstR2 insig. 26 53
  Pseudomonas aeruginosa PA14 IKLFDK_07165 TetR family transcriptional regulator sig. 32 46
  Pseudomonas aeruginosa PUPa3 DQ20_RS47405 TetR/AcrR family transcriptional regulator strong 32 46
  Paraburkholderia graminis OAS925 ABIE53_005855 TetR/AcrR family transcriptional repressor of nem operon sig. 32 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS09875 TetR/AcrR family transcriptional regulator insig. 28 60
  Rhodopseudomonas palustris CGA009 TX73_002090 TetR/AcrR family transcriptional regulator insig. 42 29
  Pseudomonas aeruginosa PA14 IKLFDK_18995 efflux system transcriptional repressor NalC strong 40 30
  Rhodopseudomonas palustris CGA009 TX73_019515 TetR/AcrR family transcriptional regulator sig. 39 26
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05450 TetR/AcrR family transcriptional regulator cofit 39 30
  Lysobacter sp. OAE881 ABIE51_RS17605 TetR/AcrR family transcriptional regulator sig. 31 46
  Pseudomonas aeruginosa MRSN321 DY961_RS14370 nalC;inference=COORDINATES efflux system transcriptional repressor NalC strong 40 30
  Pseudomonas aeruginosa PUPa3 DQ20_RS42755 nalC;inference=COORDINATES efflux system transcriptional repressor NalC strong 40 30
  Alteromonas macleodii MIT1002 MIT1002_02473 putative HTH-type transcriptional regulator YxaF insig. 23 88