Homologs of PS417_12405 from Pseudomonas simiae WCS417

DNA-binding protein
SEED: Transcriptional regulator, DeoR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_12405 DNA-binding protein insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS13100 YafY family transcriptional regulator insig. 96 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13100 YafY family transcriptional regulator insig. 96 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02729 hypothetical protein cofit 95 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4718 Transcriptional regulator, DeoR family no data 83 100
o Pseudomonas fluorescens FW300-N2E3 AO353_23870 DNA-binding protein insig. 82 100
o Pseudomonas sp. RS175 PFR28_01667 hypothetical protein insig. 79 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_750 Transcriptional regulator, DeoR family insig. 77 100
o Pseudomonas fluorescens FW300-N2C3 AO356_27880 DNA-binding protein sig. 77 100
o Azospirillum sp. SherDot2 MPMX19_02527 hypothetical protein insig. 53 93
o Serratia liquefaciens MT49 IAI46_11660 YafY family transcriptional regulator insig. 48 94
o Xanthobacter sp. DMC5 GFF394 hypothetical protein insig. 52 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08670 YafY family protein insig. 47 97
o Bosea sp. OAE506 ABIE41_RS17050 YafY family protein insig. 46 94
o Agrobacterium fabrum C58 Atu0868 hypothetical protein insig. 51 100
o Azospirillum brasilense Sp245 AZOBR_RS03550 DNA-binding protein insig. 51 94
  Magnetospirillum magneticum AMB-1 AMB_RS14065 HTH domain-containing protein insig. 47 97
  Bosea sp. OAE506 ABIE41_RS17630 YafY family protein insig. 52 94
o Sinorhizobium meliloti 1021 SMc02902 transcriptional regulator insig. 52 93
o Rahnella sp. WP5 EX31_RS00335 YafY family transcriptional regulator insig. 47 93
o Rhizobium sp. OAE497 ABIE40_RS00260 YafY family protein insig. 49 94
o Pectobacterium carotovorum WPP14 HER17_RS02905 YafY family transcriptional regulator insig. 49 97
o Dickeya dadantii 3937 DDA3937_RS00510 YafY family transcriptional regulator insig. 47 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0752 WYL domain/HTH domain insig. 45 92
o Caulobacter crescentus NA1000 CCNA_02397 DeoR-family transcriptional regulator strong 44 92
o Caulobacter crescentus NA1000 Δfur CCNA_02397 DeoR-family transcriptional regulator cofit 44 92
o Variovorax sp. SCN45 GFF4259 Transcriptional regulator, DeoR family insig. 47 95
  Rhizobium sp. OAE497 ABIE40_RS20235 YafY family protein insig. 40 95
  Pseudomonas fluorescens FW300-N2C3 AO356_26880 DNA-binding protein insig. 42 89
  Agrobacterium fabrum C58 Atu0878 hypothetical protein insig. 41 94
o Methylophilus sp. DMC18 GFF1819 hypothetical protein insig. 39 97
  Rhizobium sp. OAE497 ABIE40_RS22375 YafY family protein insig. 39 93
o Pseudomonas segetis P6 ACVTMO_RS20520 helix-turn-helix transcriptional regulator insig. 44 88
o Acinetobacter baumannii LAC-4 RR41_RS16970 YafY family transcriptional regulator insig. 40 100
o Herbaspirillum seropedicae SmR1 HSERO_RS02590 DeoR faimly transcriptional regulator insig. 44 95
o Lysobacter sp. OAE881 ABIE51_RS00890 YafY family protein insig. 41 95
o Shewanella loihica PV-4 Shew_2541 helix-turn-helix, type 11 domain-containing protein (RefSeq) insig. 42 89
  Sinorhizobium meliloti 1021 SMc00107 transcriptional regulator insig. 40 93
o Phaeobacter inhibens DSM 17395 PGA1_c29010 putative helix-turn-helix protein sig. 40 85
  Variovorax sp. SCN45 GFF2811 Transcriptional regulator, YafY family insig. 41 88
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4310 Transcriptional regulator, DeoR family insig. 40 87
o Variovorax sp. OAS795 ABID97_RS10850 YafY family protein insig. 42 88
o Klebsiella pneumoniae MKP103 KDGMDA_14420 DNA-binding transcriptional regulator insig. 40 88
  Phaeobacter inhibens DSM 17395 PGA1_c13320 Predicted transcriptional regulator insig. 39 93
  Azospirillum sp. SherDot2 MPMX19_02188 hypothetical protein insig. 43 94
o Enterobacter sp. TBS_079 MPMX20_01002 hypothetical protein sig. 42 83
o Acidovorax sp. GW101-3H11 Ac3H11_3392 Transcriptional regulator, DeoR family insig. 44 84
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15280 YafY family protein strong 41 95
o Rhodanobacter denitrificans MT42 LRK55_RS08110 YafY family protein insig. 40 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08345 YafY family transcriptional regulator sig. 40 88
o Cupriavidus basilensis FW507-4G11 RR42_RS17335 DeoR family transcriptional regulator insig. 43 83
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS00160 YafY family transcriptional regulator sig. 39 95
o Klebsiella michiganensis M5al BWI76_RS06330 DNA-binding transcriptional regulator insig. 40 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS01175 YafY family protein insig. 41 83
o Ralstonia solanacearum UW163 UW163_RS08100 YafY family transcriptional regulator insig. 41 84
o Shewanella oneidensis MR-1 SO1758 conserved hypothetical protein (NCBI ptt file) insig. 38 96
o Enterobacter asburiae PDN3 EX28DRAFT_2560 Predicted transcriptional regulator insig. 40 83
o Shewanella amazonensis SB2B Sama_1191 hypothetical protein (RefSeq) insig. 42 88
o Rhodanobacter sp. FW510-T8 OKGIIK_15100 DNA-binding transcriptional regulator insig. 39 95
o Ralstonia solanacearum PSI07 RPSI07_RS11775 YafY family transcriptional regulator insig. 40 84
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05525 YafY family transcriptional regulator sig. 40 84
o Ralstonia solanacearum GMI1000 RS_RS13385 YafY family transcriptional regulator no data 40 83
  Agrobacterium fabrum C58 Atu5271 hypothetical protein no data 39 93
o Shewanella sp. ANA-3 Shewana3_2704 helix-turn-helix, type 11 domain-containing protein (RefSeq) insig. 39 84
  Phaeobacter inhibens DSM 17395 PGA1_c36450 putative DNA-binding protein insig. 40 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04656 Predicted transcriptional regulator insig. 37 91
  Phaeobacter inhibens DSM 17395 PGA1_c10680 helix-turn-helix domain-containing protein strong 36 90
o Rhodopseudomonas palustris CGA009 TX73_020790 YafY family protein insig. 38 89
o Paraburkholderia graminis OAS925 ABIE53_000815 putative DNA-binding transcriptional regulator YafY insig. 36 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS26710 YafY family protein insig. 35 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3108 Predicted transcriptional regulator insig. 33 97
o Burkholderia phytofirmans PsJN BPHYT_RS03385 DeoR family transcriptional regulator sig. 37 91
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19095 DNA-binding transcriptional regulator insig. 30 87
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09195 YafY family protein insig. 34 84
o Cellulophaga baltica 18 M666_RS18695 YafY family protein insig. 31 88
o Dinoroseobacter shibae DFL-12 Dshi_1342 Helix-turn-helix type 11 domain protein (RefSeq) insig. 40 84
  Rhizobium sp. OAE497 ABIE40_RS28235 WYL domain-containing protein insig. 45 39
  Rhizobium sp. OAE497 ABIE40_RS28240 HTH domain-containing protein insig. 60 29
  Pseudomonas aeruginosa MRSN321 DY961_RS05575 YafY family protein insig. 34 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS47215 YafY family protein insig. 34 87
  Pseudomonas aeruginosa PA14 IKLFDK_06980 transcriptional regulator sig. 34 87
  Acidovorax sp. GW101-3H11 Ac3H11_2414 Transcriptional regulator, DeoR family insig. 34 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3761 Transcriptional regulator, DeoR family insig. 34 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00295 hypothetical protein insig. 23 88
  Lysobacter sp. OAE881 ABIE51_RS02995 YafY family protein cofit 30 86
  Pseudomonas sp. S08-1 OH686_03160 Transcriptional regulator, YafY family insig. 34 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02525 transcriptional regulator insig. 30 86
  Rhodanobacter sp. FW510-T8 OKGIIK_15485 yobV transcriptional regulator no data 31 86
  Rhodanobacter denitrificans MT42 LRK55_RS08485 YafY family protein sig. 30 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08720 YafY family transcriptional regulator insig. 30 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14845 YafY family protein strong 30 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14585 YafY family protein insig. 30 83
  Xanthobacter sp. DMC5 GFF1635 hypothetical protein insig. 31 87
  Rhodopseudomonas palustris CGA009 TX73_011720 YafY family protein insig. 32 87
  Fusobacterium nucleatum SB010 HUW76_00535 YafY family transcriptional regulator insig. 23 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2226.1 Transcriptional regulator, DeoR family insig. 31 78
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5368 Transcriptional regulator, DeoR family no data 41 34
  Burkholderia phytofirmans PsJN BPHYT_RS18405 transcriptional regulator insig. 33 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS14150 YafY family protein insig. 29 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.834.1 FIG01211032: hypothetical protein insig. 28 76