Homologs of GFF228 from Variovorax sp. SCN45

ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: microcin C transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF228 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) cofit 100 100
o Acidovorax sp. GW101-3H11 Ac3H11_2910 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) strong 83 100
o Variovorax sp. OAS795 ABID97_RS16515 ABC transporter permease subunit strong 81 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4336 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) cofit 82 99
o Herbaspirillum seropedicae SmR1 HSERO_RS17140 ABC transporter permease sig. 71 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15040 microcin C ABC transporter permease YejB insig. 70 100
o Ralstonia solanacearum UW163 UW163_RS12510 microcin C ABC transporter permease YejB insig. 70 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS06175 ABC transporter permease subunit cofit 72 99
o Cupriavidus basilensis FW507-4G11 RR42_RS13380 microcin ABC transporter permease strong 71 100
o Ralstonia solanacearum GMI1000 RS_RS05855 microcin C ABC transporter permease YejB sig. 69 100
o Burkholderia phytofirmans PsJN BPHYT_RS12380 ABC transporter permease insig. 71 99
o Paraburkholderia graminis OAS925 ABIE53_002549 microcin C transport system permease protein sig. 69 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS10685 microcin C ABC transporter permease YejB strong 70 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00561 microcin C transport system permease protein insig. 70 99
o Ralstonia solanacearum PSI07 RPSI07_RS18335 microcin C ABC transporter permease YejB insig. 69 100
  Burkholderia phytofirmans PsJN BPHYT_RS07160 ABC transporter permease insig. 63 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04901 microcin C transport system permease protein insig. 63 100
o Pseudomonas sp. RS175 PFR28_01548 Inner membrane ABC transporter permease protein YejB strong 58 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02685 Inner membrane ABC transporter permease protein YejB cofit 57 100
o Pseudomonas segetis P6 ACVTMO_RS13945 microcin C ABC transporter permease YejB strong 57 100
  Paraburkholderia graminis OAS925 ABIE53_006374 microcin C transport system permease protein insig. 62 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3344 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) sig. 57 100
o Pseudomonas orientalis W4I3 QF045_RS14735 microcin C ABC transporter permease YejB cofit 56 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4592 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) insig. 57 100
o Pseudomonas fluorescens FW300-N2C3 AO356_24460 microcin ABC transporter permease cofit 56 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_583 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) cofit 56 100
o Pseudomonas sp. DMC3 GFF1018 Inner membrane ABC transporter permease protein YejB cofit 57 100
o Pseudomonas fluorescens FW300-N2E3 AO353_23470 microcin ABC transporter permease insig. 56 100
o Pseudomonas simiae WCS417 PS417_12200 microcin ABC transporter permease strong 56 100
o Pseudomonas putida KT2440 PP_4148 putative inner membrane ABC transporter permease protein sig. 56 100
o Pseudomonas fluorescens SBW25 PFLU_RS12890 microcin C ABC transporter permease YejB insig. 56 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12890 microcin C ABC transporter permease YejB sig. 56 100
o Pseudomonas sp. BP01 JOY50_RS07110 microcin C ABC transporter permease YejB insig. 55 100
o Pseudomonas syringae pv. syringae B728a Psyr_1757 Binding-protein-dependent transport systems inner membrane component sig. 55 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1757 Binding-protein-dependent transport systems inner membrane component strong 55 100
o Bosea sp. OAE506 ABIE41_RS23965 microcin C ABC transporter permease YejB strong 54 100
o Xanthobacter sp. DMC5 GFF1648 Inner membrane ABC transporter permease protein YejB no data 54 100
o Agrobacterium fabrum C58 Atu0188 ABC transporter, membrane spanning protein (peptide) strong 54 99
o Pseudomonas stutzeri RCH2 Psest_2066 ABC-type uncharacterized transport system, permease component strong 58 100
o Marinobacter adhaerens HP15 HP15_1808 peptide ABC transporter, permease protein strong 54 99
o Pseudomonas sp. S08-1 OH686_03605 ABC transporter premease protein strong 54 100
o Pseudomonas aeruginosa MRSN321 DY961_RS20775 microcin C ABC transporter permease YejB sig. 56 100
o Pseudomonas aeruginosa PA14 IKLFDK_08795 microcin ABC transporter permease sig. 56 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS54855 microcin C ABC transporter permease YejB strong 56 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2031 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) sig. 54 99
  Pseudomonas sp. RS175 PFR28_01402 Inner membrane ABC transporter permease protein YejB sig. 56 99
o Rhodopseudomonas palustris CGA009 TX73_019120 microcin C ABC transporter permease YejB strong 52 99
o Pseudomonas sp. SVBP6 COO64_RS19230 microcin C ABC transporter permease YejB insig. 56 100
  Pseudomonas sp. BP01 JOY50_RS19780 microcin C ABC transporter permease YejB no data 55 99
  Pseudomonas putida KT2440 PP_3077 putative ABC transporter permease protein insig. 55 99
o Sinorhizobium meliloti 1021 SMc02831 ABC transporter permease no data 53 99
o Azospirillum sp. SherDot2 MPMX19_02169 Inner membrane ABC transporter permease protein YejB insig. 53 100
  Pseudomonas sp. DMC3 GFF3653 Inner membrane ABC transporter permease protein YejB insig. 56 99
  Pseudomonas syringae pv. syringae B728a Psyr_2903 Binding-protein-dependent transport systems inner membrane component insig. 53 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2903 Binding-protein-dependent transport systems inner membrane component insig. 53 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5627 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) no data 56 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_17180 peptide ABC transporter permease insig. 54 100
  Pseudomonas fluorescens FW300-N2E3 AO353_21795 peptide ABC transporter permease insig. 54 100
  Pseudomonas fluorescens FW300-N2C3 AO356_00395 peptide ABC transporter permease insig. 55 99
o Rhizobium sp. OAE497 ABIE40_RS00620 microcin C ABC transporter permease YejB strong 53 99
o Dickeya dianthicola 67-19 HGI48_RS09225 microcin C ABC transporter permease YejB cofit 52 99
o Klebsiella pneumoniae MKP103 KDGMDA_26725 Inner membrane ABC transporter permease protein YejB insig. 53 99
o Azospirillum brasilense Sp245 AZOBR_RS03820 microcin C ABC transporter permease YejB strong 52 100
o Magnetospirillum magneticum AMB-1 AMB_RS22195 microcin C ABC transporter permease YejB no data 52 100
o Escherichia coli ECOR27 NOLOHH_14960 yejB Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECRC62 BNILDI_13880 yejB Inner membrane ABC transporter permease protein YejB cofit 53 99
o Pectobacterium carotovorum WPP14 HER17_RS12925 microcin C ABC transporter permease YejB insig. 52 99
o Escherichia coli BL21 ECD_02108 microcin C ABC transporter permease insig. 53 99
o Escherichia fergusonii Becca EFB2_01678 Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECOR38 HEPCGN_22650 yejB Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECRC100 OKFHMN_23385 yejB Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECRC101 MCAODC_14435 yejB Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECRC102 NIAGMN_21150 yejB Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECRC98 JDDGAC_27345 yejB Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli ECRC99 KEDOAH_04800 yejB Inner membrane ABC transporter permease protein YejB no data 53 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01531 Inner membrane ABC transporter permease protein YejB insig. 53 99
o Escherichia coli BW25113 b2178 yejB predicted oligopeptide transporter subunit (NCBI) sig. 53 99
o Escherichia coli Nissle 1917 ECOLIN_RS12735 microcin C ABC transporter permease YejB insig. 53 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2878 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) insig. 55 99
o Enterobacter asburiae PDN3 EX28DRAFT_0383 ABC-type uncharacterized transport system, permease component insig. 53 99
  Pseudomonas orientalis W4I3 QF045_RS14165 microcin C ABC transporter permease YejB insig. 55 100
o Phaeobacter inhibens DSM 17395 PGA1_c30170 ABC transporter permease protein strong 52 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3758 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) cofit 52 99
  Pseudomonas fluorescens SBW25 PFLU_RS12865 microcin C ABC transporter permease YejB insig. 55 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12865 microcin C ABC transporter permease YejB strong 55 100
o Enterobacter sp. TBS_079 MPMX20_03144 Inner membrane ABC transporter permease protein YejB insig. 53 99
  Pseudomonas simiae WCS417 PS417_12175 peptide ABC transporter permease insig. 55 100
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03361 Inner membrane ABC transporter permease protein YejB cofit 55 100
o Dinoroseobacter shibae DFL-12 Dshi_0656 binding-protein-dependent transport systems inner membrane component (RefSeq) strong 52 99
o Dickeya dadantii 3937 DDA3937_RS09185 microcin C ABC transporter permease YejB insig. 52 99
o Dickeya dianthicola ME23 DZA65_RS09530 microcin C ABC transporter permease YejB insig. 52 99
o Erwinia amylovora T8 OLJFJH_11735 microcin ABC transporter permease insig. 51 99
o Serratia liquefaciens MT49 IAI46_17320 microcin C ABC transporter permease YejB insig. 50 99
o Klebsiella michiganensis M5al BWI76_RS19785 microcin C ABC transporter permease YejB insig. 52 96
o Pantoea sp. MT58 IAI47_06610 microcin C ABC transporter permease YejB insig. 52 99
  Pseudomonas sp. SVBP6 COO64_RS23865 microcin C ABC transporter permease YejB insig. 55 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00695 microcin C ABC transporter permease YejB cofit 51 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_16060 microcin ABC transporter permease cofit 51 96
o Erwinia tracheiphila SCR3 LU632_RS17570 microcin C ABC transporter permease YejB insig. 51 96
o Rahnella sp. WP5 EX31_RS19135 microcin C ABC transporter permease YejB insig. 51 99