Homologs of PGA1_c19380 from Phaeobacter inhibens DSM 17395

putative phage integrase
SEED: Phage integrase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c19380 putative phage integrase insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_2590 integrase family protein (RefSeq) insig. 76 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS38195 tyrosine-type recombinase/integrase insig. 58 93
o Pseudomonas orientalis W4I3 QF045_RS20340 tyrosine-type recombinase/integrase insig. 57 96
o Pseudomonas stutzeri RCH2 Psest_3423 Site-specific recombinase XerC insig. 58 93
o Pseudomonas sp. BP01 JOY50_RS12925 tyrosine-type recombinase/integrase insig. 58 93
o Pseudomonas putida KT2440 PP_3791 Site-specific recombinase, phage integrase family insig. 55 96
o Bosea sp. OAE506 ABIE41_RS06940 tyrosine-type recombinase/integrase insig. 58 93
o Magnetospirillum magneticum AMB-1 AMB_RS18475 integrase insig. 55 100
o Sphingobium sp. HT1-2 GFF5357 Phage integrase insig. 56 100
o Marinobacter adhaerens HP15 HP15_4164 phage integrase family protein insig. 58 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03410 tyrosine-type recombinase/integrase insig. 55 94
o Alteromonas macleodii MIT1002 MIT1002_02605 site-specific tyrosine recombinase XerC insig. 57 93
  Alteromonas macleodii MIT1002 MIT1002_02610 site-specific tyrosine recombinase XerC insig. 57 93
  Sphingobium sp. HT1-2 GFF5340 Phage integrase cofit 56 93
o Escherichia coli Nissle 1917 ECOLIN_RS01460 site-specific integrase insig. 57 93
o Caulobacter crescentus NA1000 CCNA_01844 DNA integration/recombination/inversion protein sig. 51 99
o Caulobacter crescentus NA1000 Δfur CCNA_01844 DNA integration/recombination/inversion protein cofit 51 99
o Klebsiella michiganensis M5al BWI76_RS13030 site-specific recombinase, phage integrase family protein insig. 56 93
o Lysobacter sp. OAE881 ABIE51_RS03485 tyrosine-type recombinase/integrase insig. 54 92
o Rhodopseudomonas palustris CGA009 TX73_006840 tyrosine-type recombinase/integrase insig. 53 93
o Shewanella loihica PV-4 Shew_0251 phage integrase family protein (RefSeq) insig. 46 93
  Sinorhizobium meliloti 1021 SMa1874 hypothetical protein insig. 58 54
  Alteromonas macleodii MIT1002 MIT1002_00614 site-specific tyrosine recombinase XerC no data 58 50
  Alteromonas macleodii MIT1002 MIT1002_02616 site-specific tyrosine recombinase XerC no data 58 50
  Bosea sp. OAE506 ABIE41_RS19005 integrase no data 50 42
  Paraburkholderia graminis OAS925 ABIE53_000988 hypothetical protein sig. 65 26
  Sphingobium sp. HT1-2 GFF5358 Phage integrase cofit 63 23
  Caulobacter crescentus NA1000 CCNA_02470 DNA integration/recombination/inversion protein cofit 43 31
  Caulobacter crescentus NA1000 Δfur CCNA_02470 DNA integration/recombination/inversion protein cofit 43 31
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 26 73
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 24 74
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 29 76
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 27 77
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 23 74
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 25 77
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 24 79
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 24 79
  Desulfovibrio vulgaris Hildenborough JW710 DVU2066 xerC site-specific recombinase, phage integrase family (TIGR) sig. 31 72
  Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 25 77
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 25 77
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 25 77
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC cofit 25 77
  Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 25 77
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 25 77
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 25 77
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 25 77
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 25 77
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 25 77
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 25 77
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 25 77
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 28 77
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 26 77
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 28 77
  Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 28 77
  Dechlorosoma suillum PS Dsui_0651 tyrosine recombinase XerC insig. 28 74
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF239 Tyrosine recombinase XerC no data 26 77
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 24 71
  Bosea sp. OAE506 ABIE41_RS19630 tyrosine-type recombinase/integrase insig. 52 20
  Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 25 77
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 25 77
  Enterobacter sp. TBS_079 MPMX20_04465 Tyrosine recombinase XerC strong 26 77
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 25 53
  Klebsiella pneumoniae MKP103 KDGMDA_09700 tyrosine recombinase XerC strong 25 77
  Synechocystis sp000284455 PCC 6803 SGL_RS01640 site-specific integrase insig. 28 75
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 25 78
  Pectobacterium carotovorum WPP14 HER17_RS18625 tyrosine-type recombinase/integrase cofit 35 41
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 25 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 25 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 25 81
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 23 73
  Erwinia amylovora T8 OLJFJH_06415 tyrosine recombinase XerC strong 26 77
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 28 77
  Shewanella loihica PV-4 Shew_1254 phage integrase family protein (RefSeq) insig. 26 70
  Shewanella oneidensis MR-1 SO1448 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 26 70
  Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 25 76
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 27 74
  Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 26 73
  Mycobacterium tuberculosis H37Rv Rv2646 Probable integrase insig. 36 35
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 27 74
  Pantoea sp. MT58 IAI47_18400 tyrosine recombinase XerC sig. 26 77
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 27 73
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 27 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3595 Site-specific recombinase XerD sig. 26 67
  Shewanella sp. ANA-3 Shewana3_1799 phage integrase family protein (RefSeq) insig. 26 70
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 24 77
  Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 27 73
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 28 73
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11660 site-specific integrase no data 41 25
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 29 71
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 28 73
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15380 tyrosine recombinase XerC no data 26 76
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 25 76
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08780 xerC tyrosine recombinase XerC no data 25 77
  Erwinia tracheiphila SCR3 LU632_RS24135 xerC tyrosine recombinase XerC no data 25 77
  Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 24 77
  Erwinia tracheiphila SCR3 LU632_RS03480 tyrosine-type recombinase/integrase insig. 38 32
  Azospirillum sp. SherDot2 MPMX19_02110 Tyrosine recombinase XerC no data 33 30
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 26 73
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 25 72