Homologs of GFF1686 from Variovorax sp. SCN45

Uncharacterized protein Bsu YraM
SEED: Uncharacterized protein Bsu YraM
KEGG: hypothetical protein

106 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1686 Uncharacterized protein Bsu YraM insig. 100 100
o Variovorax sp. OAS795 ABID97_RS28440 PrpF domain-containing protein insig. 43 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4204 FldA protein insig. 41 97
  Variovorax sp. OAS795 ABID97_RS18820 PrpF domain-containing protein insig. 40 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0523 Uncharacterized protein conserved in bacteria insig. 41 95
o Xanthobacter sp. DMC5 GFF2766 3-methylitaconate isomerase insig. 41 95
  Variovorax sp. OAS795 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF insig. 38 97
o Klebsiella michiganensis M5al BWI76_RS14180 hypothetical protein insig. 40 97
o Agrobacterium fabrum C58 Atu4263 hypothetical protein strong 41 97
o Erwinia amylovora T8 OLJFJH_13345 4-oxalomesaconate tautomerase strong 37 97
  Shewanella loihica PV-4 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) strong 34 97
o Cupriavidus basilensis FW507-4G11 RR42_RS23050 4-oxalomesaconate tautomerase insig. 39 96
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase strong 37 97
  Klebsiella michiganensis M5al BWI76_RS04370 FldA family protein sig. 38 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF strong 36 97
o Rahnella sp. WP5 EX31_RS10210 4-oxalomesaconate tautomerase insig. 38 97
o Pseudomonas sp. BP01 JOY50_RS13520 4-oxalomesaconate tautomerase insig. 39 96
  Paraburkholderia graminis OAS925 ABIE53_005044 putative AcnD-accessory protein PrpF strong 37 99
  Ralstonia solanacearum GMI1000 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF cofit 38 97
o Pseudomonas protegens RBAN4 FABNJH_13060 4-oxalomesaconate tautomerase insig. 40 96
  Shewanella sp. ANA-3 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) strong 36 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02982 2-methylaconitate cis-trans isomerase insig. 37 98
o Pseudomonas putida KT2440 PP_2513 4-oxalomesaconate tautomerase strong 38 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF sig. 36 99
o Azospirillum brasilense Sp245 AZOBR_RS28105 hypothetical protein insig. 41 97
  Ralstonia solanacearum PSI07 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF cofit 37 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4463 FIG00958979: hypothetical protein insig. 40 96
o Dickeya dadantii 3937 DDA3937_RS07810 4-oxalomesaconate tautomerase insig. 39 96
o Sphingobium sp. HT1-2 GFF2872 4-oxalomesaconate tautomerase (EC 5.3.2.8) cofit 38 95
  Pseudomonas sp. SVBP6 COO64_RS09915 prpF 2-methylaconitate cis-trans isomerase PrpF insig. 37 97
o Escherichia fergusonii Becca EFB2_03337 Putative isomerase YbhH insig. 36 96
o Escherichia coli ECRC62 BNILDI_21090 ybhH 4-oxalomesaconate tautomerase insig. 36 96
o Escherichia coli Nissle 1917 ECOLIN_RS04095 4-oxalomesaconate tautomerase no data 36 96
o Escherichia coli BW25113 b0769 ybhH hypothetical protein (NCBI) insig. 36 96
  Burkholderia phytofirmans PsJN BPHYT_RS30140 3-methylitaconate isomerase insig. 36 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF insig. 37 97
  Ralstonia solanacearum UW163 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF insig. 37 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF strong 36 97
o Escherichia coli ECOR27 NOLOHH_23095 ybhH 4-oxalomesaconate tautomerase insig. 36 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02944 4-oxalomesaconate tautomerase insig. 36 96
o Pseudomonas fluorescens FW300-N2C3 AO356_28890 isomerase insig. 40 95
o Pseudomonas fluorescens SBW25 PFLU_RS14940 4-oxalomesaconate tautomerase insig. 40 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14940 4-oxalomesaconate tautomerase strong 40 95
o Escherichia coli ECRC100 OKFHMN_06665 ybhH 4-oxalomesaconate tautomerase cofit 36 96
o Escherichia coli ECRC101 MCAODC_25885 ybhH 4-oxalomesaconate tautomerase insig. 36 96
o Escherichia coli ECRC102 NIAGMN_04715 ybhH 4-oxalomesaconate tautomerase insig. 36 96
o Escherichia coli ECRC98 JDDGAC_10320 ybhH 4-oxalomesaconate tautomerase insig. 36 96
o Escherichia coli ECRC99 KEDOAH_21300 ybhH 4-oxalomesaconate tautomerase no data 36 96
  Pseudomonas sp. DMC3 GFF5233 2-methyl-aconitate isomerase cofit 36 97
  Herbaspirillum seropedicae SmR1 HSERO_RS11420 3-methylitaconate isomerase no data 36 97
  Alteromonas macleodii MIT1002 MIT1002_03132 3-methylitaconate isomerase no data 35 97
  Pseudomonas putida KT2440 PP_2055 putative isomerase sig. 40 96
  Pseudomonas sp. SVBP6 COO64_RS20550 4-oxalomesaconate tautomerase insig. 39 95
  Shewanella oneidensis MR-1 SO0342 conserved hypothetical protein (NCBI ptt file) strong 36 97
  Azospirillum brasilense Sp245 AZOBR_RS26900 hypothetical protein insig. 40 95
  Variovorax sp. SCN45 GFF269 2-methylaconitate isomerase strong 36 99
  Pseudomonas fluorescens FW300-N2C3 AO356_20880 3-methylitaconate isomerase insig. 37 99
o Azospirillum sp. SherDot2 MPMX19_03556 Putative isomerase YbhH insig. 40 98
o Klebsiella pneumoniae MRSN742743 KFA93_RS08775 4-oxalomesaconate tautomerase insig. 38 97
  Pseudomonas sp. S08-1 OH686_01675 probable AcnD-accessory protein PrpF no data 34 99
o Klebsiella pneumoniae MKP103 KDGMDA_08375 4-oxalomesaconate tautomerase insig. 38 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase no data 35 97
o Pseudomonas sp. RS175 PFR28_01943 Putative isomerase YbhH strong 39 95
  Pseudomonas sp. BP01 JOY50_RS22300 4-oxalomesaconate tautomerase insig. 39 96
o Acidovorax sp. GW101-3H11 Ac3H11_4370 FIG00786362: hypothetical protein insig. 38 95
  Acinetobacter radioresistens SK82 MPMX26_00659 2-methyl-aconitate isomerase strong 35 99
  Acinetobacter baumannii LAC-4 RR41_RS03720 2-methylaconitate cis-trans isomerase PrpF strong 35 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6064 2-methylaconitate isomerase strong 37 99
  Cupriavidus basilensis FW507-4G11 RR42_RS11275 3-methylitaconate isomerase strong 35 97
  Pseudomonas sp. RS175 PFR28_02924 2-methyl-aconitate isomerase strong 36 99
  Lysobacter sp. OAE881 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF no data 36 97
  Acidovorax sp. GW101-3H11 Ac3H11_2325 2-methylaconitate cis-trans isomerase no data 35 98
  Kangiella aquimarina DSM 16071 B158DRAFT_1346 2-methylaconitate cis-trans isomerase strong 35 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4115 2-methylaconitate cis-trans isomerase strong 35 97
  Pseudomonas putida KT2440 PP_2337 aconitate isomerase strong 36 97
  Pseudomonas fluorescens FW300-N2E3 AO353_00885 3-methylitaconate isomerase cofit 34 97
  Pseudomonas syringae pv. syringae B728a Psyr_2088 2-methylaconitate cis-trans isomerase insig. 36 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2088 2-methylaconitate cis-trans isomerase insig. 36 97
  Pseudomonas protegens RBAN4 FABNJH_09640 prpF 2-methylaconitate cis-trans isomerase PrpF insig. 36 97
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04358 2-methyl-aconitate isomerase cofit 36 97
  Pseudomonas orientalis W4I3 QF045_RS22890 2-methylaconitate cis-trans isomerase PrpF cofit 35 97
  Ralstonia solanacearum PSI07 RPSI07_RS06335 4-oxalomesaconate tautomerase insig. 37 96
  Pseudomonas sp. BP01 JOY50_RS25735 prpF 2-methylaconitate cis-trans isomerase PrpF insig. 35 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5119.1 FldA protein insig. 38 95
  Pseudomonas segetis P6 ACVTMO_RS13025 prpF 2-methylaconitate cis-trans isomerase PrpF no data 35 99
  Pseudomonas fluorescens SBW25 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF sig. 35 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF strong 35 97
  Pseudomonas simiae WCS417 PS417_21065 3-methylitaconate isomerase sig. 36 97
  Pseudomonas stutzeri RCH2 Psest_2318 probable AcnD-accessory protein PrpF no data 34 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF insig. 35 98
  Azospirillum brasilense Sp245 AZOBR_RS24310 3-methylitaconate isomerase insig. 37 97
  Paraburkholderia graminis OAS925 ABIE53_004027 4-oxalomesaconate tautomerase sig. 36 97
  Pseudomonas aeruginosa PA14 IKLFDK_03430 2-methylaconitate cis-trans isomerase PrpF strong 34 97
  Pseudomonas aeruginosa MRSN321 DY961_RS08530 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF strong 34 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS44320 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF strong 34 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01376 4-oxalomesaconate tautomerase strong 36 98
  Magnetospirillum magneticum AMB-1 AMB_RS01270 4-oxalomesaconate tautomerase insig. 35 97
  Sinorhizobium meliloti 1021 SMc00497 tramsmembrane protein insig. 34 95
  Marinobacter adhaerens HP15 HP15_1929 AcnD-accessory protein PrpF no data 34 95
  Rhodopseudomonas palustris CGA009 TX73_024400 4-oxalomesaconate tautomerase cofit 33 97
  Shewanella amazonensis SB2B Sama_3297 hypothetical protein (RefSeq) strong 33 97
  Castellaniella sp019104865 MT123 ABCV34_RS02795 4-oxalomesaconate tautomerase insig. 34 97
  Bosea sp. OAE506 ABIE41_RS16535 4-oxalomesaconate tautomerase insig. 34 97
  Pseudomonas protegens RBAN4 FABNJH_14015 prpF PrpF protein insig. 31 93
  Cupriavidus basilensis FW507-4G11 RR42_RS06320 3-methylitaconate isomerase no data 41 40
  Erwinia amylovora T8 OLJFJH_15460 PrpF protein insig. 25 85