Homologs of PGA1_c16170 from Phaeobacter inhibens DSM 17395

TRAP transporter, 4TM/12TM fusion protein
SEED: TRAP-type uncharacterized transport system, fused permease component

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c16170 TRAP transporter, 4TM/12TM fusion protein strong 100 100
o Dinoroseobacter shibae DFL-12 Dshi_1444 TRAP transporter, 4TM/12TM fusion protein (RefSeq) strong 58 99
o Pseudomonas stutzeri RCH2 Psest_0197 TRAP transporter, 4TM/12TM fusion protein strong 55 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_02250 DUF3394 domain-containing protein insig. 51 98
o Marinobacter adhaerens HP15 HP15_1070 TRAP-type uncharacterized transport system, fused permease component sig. 51 98
o Sinorhizobium meliloti 1021 SM_b20291 hypothetical protein insig. 51 94
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4038 TRAP-type uncharacterized transport system, fused permease component insig. 48 94
  Castellaniella sp019104865 MT123 ABCV34_RS12540 TRAP transporter permease cofit 35 77
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_320 TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 insig. 42 36
  Pseudomonas sp. RS175 PFR28_02586 hypothetical protein insig. 41 37
  Magnetospirillum magneticum AMB-1 AMB_RS04540 C4-dicarboxylate ABC transporter insig. 40 39
  Azospirillum sp. SherDot2 MPMX19_05256 hypothetical protein insig. 36 40
  Shewanella oneidensis MR-1 SO0455 hypothetical transporter (NCBI ptt file) strong 41 36
  Shewanella sp. ANA-3 Shewana3_0456 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 40 36
  Pseudomonas sp. DMC3 GFF1142 hypothetical protein cofit 41 36
  Xanthobacter sp. DMC5 GFF4729 hypothetical protein insig. 39 36
  Azospirillum brasilense Sp245 AZOBR_RS08575 C4-dicarboxylate ABC transporter insig. 38 36
  Pseudomonas aeruginosa PA14 IKLFDK_25690 C4-dicarboxylate ABC transporter insig. 39 36
  Pseudomonas putida KT2440 PP_3955 permease insig. 38 39
  Pseudomonas stutzeri RCH2 Psest_0084 alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) strong 38 39
  Rhodopseudomonas palustris CGA009 TX73_023415 TRAP transporter permease insig. 38 36
  Bosea sp. OAE506 ABIE41_RS05850 TRAP transporter permease insig. 39 34
  Azospirillum brasilense Sp245 AZOBR_RS16500 C4-dicarboxylate ABC transporter permease insig. 35 37
  Serratia liquefaciens MT49 IAI46_10120 TRAP transporter permease insig. 35 39
  Bosea sp. OAE506 ABIE41_RS03160 TRAP transporter permease insig. 38 33
  Marinobacter adhaerens HP15 HP15_723 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 44 25
  Dinoroseobacter shibae DFL-12 Dshi_1194 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 39 29
  Dinoroseobacter shibae DFL-12 Dshi_0646 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 36 30
  Vibrio cholerae E7946 ATCC 55056 CSW01_14735 C4-dicarboxylate ABC transporter permease insig. 37 27
  Bosea sp. OAE506 ABIE41_RS02510 TRAP transporter fused permease subunit insig. 39 27
  Dinoroseobacter shibae DFL-12 Dshi_0994 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 37 29
  Rhodopseudomonas palustris CGA009 TX73_017905 TRAP transporter permease insig. 32 33
  Shewanella oneidensis MR-1 SO0455 hypothetical transporter (NCBI ptt file) strong 37 23
  Dinoroseobacter shibae DFL-12 Dshi_2287 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 39 24
  Magnetospirillum magneticum AMB-1 AMB_RS04540 C4-dicarboxylate ABC transporter insig. 38 24
  Pseudomonas aeruginosa PA14 IKLFDK_25690 C4-dicarboxylate ABC transporter insig. 38 24
  Azospirillum sp. SherDot2 MPMX19_05256 hypothetical protein insig. 39 22
  Bosea sp. OAE506 ABIE41_RS03160 TRAP transporter permease insig. 35 24
  Shewanella sp. ANA-3 Shewana3_0456 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 35 23
  Pseudomonas sp. DMC3 GFF1142 hypothetical protein cofit 38 23
  Serratia liquefaciens MT49 IAI46_10120 TRAP transporter permease insig. 34 24
  Dinoroseobacter shibae DFL-12 Dshi_1088 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 35 31
  Pseudomonas sp. RS175 PFR28_02586 hypothetical protein insig. 31 37
  Pseudomonas putida KT2440 PP_3955 permease insig. 39 20
  Azospirillum brasilense Sp245 AZOBR_RS16500 C4-dicarboxylate ABC transporter permease insig. 32 36
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_320 TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 insig. 36 25
  Pseudomonas stutzeri RCH2 Psest_0084 alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) strong 37 23
  Rhodopseudomonas palustris CGA009 TX73_017905 TRAP transporter permease insig. 32 27
  Marinobacter adhaerens HP15 HP15_723 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 35 28
  Dinoroseobacter shibae DFL-12 Dshi_1194 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 31 33
  Bosea sp. OAE506 ABIE41_RS02510 TRAP transporter fused permease subunit insig. 32 37
  Bosea sp. OAE506 ABIE41_RS05850 TRAP transporter permease insig. 35 23
  Azospirillum brasilense Sp245 AZOBR_RS08575 C4-dicarboxylate ABC transporter insig. 38 25
  Xanthobacter sp. DMC5 GFF4729 hypothetical protein insig. 36 23
  Rhodopseudomonas palustris CGA009 TX73_023415 TRAP transporter permease insig. 35 24
  Dinoroseobacter shibae DFL-12 Dshi_2287 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 32 21
  Dinoroseobacter shibae DFL-12 Dshi_0994 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 31 18
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 17
  Vibrio cholerae E7946 ATCC 55056 CSW01_14735 C4-dicarboxylate ABC transporter permease insig. 40 11
  Dinoroseobacter shibae DFL-12 Dshi_2753 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 30 18
  Caulobacter crescentus NA1000 CCNA_01515 C4-dicarboxylate transporter large subunit sig. 30 16
  Caulobacter crescentus NA1000 Δfur CCNA_01515 C4-dicarboxylate transporter large subunit cofit 30 16
  Synechocystis sp000284455 PCC 6803 SGL_RS10910 TRAP transporter large permease subunit insig. 28 20
  Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 30 16
  Xanthobacter sp. DMC5 GFF2559 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 28 21
  Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 27 16
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 16
  Pseudomonas simiae WCS417 PS417_17380 membrane protein insig. 29 16
  Pseudomonas fluorescens SBW25 PFLU_RS19305 TRAP transporter large permease insig. 29 16
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19305 TRAP transporter large permease insig. 29 16
  Pseudomonas sp. DMC3 GFF1614 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 29 16
  Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 29 16
  Variovorax sp. OAS795 ABID97_RS10330 TRAP transporter large permease strong 28 16
  Burkholderia phytofirmans PsJN BPHYT_RS24185 C4-dicarboxylate ABC transporter permease insig. 39 10
  Pseudomonas syringae pv. syringae B728a Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 29 16
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 29 16
  Shewanella oneidensis MR-1 SO3136 dctM C4-dicarboxylate transport protein (NCBI ptt file) insig. 26 20
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05326 TRAP transporter, DctM subunit insig. 38 10
  Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 27 17
  Paraburkholderia graminis OAS925 ABIE53_006500 tripartite ATP-independent transporter DctM subunit sig. 38 10
  Ralstonia sp. UNC404CL21Col ABZR87_RS21100 TRAP transporter large permease insig. 38 10
  Pseudomonas sp. BP01 JOY50_RS02045 TRAP transporter large permease insig. 28 16
  Pseudomonas putida KT2440 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) strong 28 16
  Shewanella amazonensis SB2B Sama_2211 alpha-ketoglutarate TRAP transporter, large permease component (from data) strong 26 20
  Rhizobium sp. OAE497 ABIE40_RS16625 TRAP transporter large permease subunit insig. 31 17
  Sinorhizobium meliloti 1021 SM_b20372 hypothetical protein insig. 29 17
  Phaeobacter inhibens DSM 17395 PGA1_c13130 TRAP transporter, subunit DctM insig. 32 19
  Sinorhizobium meliloti 1021 SMc00273 transmembrane protein insig. 28 18
  Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 33 10
  Dinoroseobacter shibae DFL-12 Dshi_1088 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 33 16
  Castellaniella sp019104865 MT123 ABCV34_RS02885 TRAP transporter large permease insig. 29 17
  Dinoroseobacter shibae DFL-12 Dshi_1482 TRAP dicarboxylate transporter, DctM subunit (RefSeq) strong 37 11
  Variovorax sp. SCN45 GFF2920 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 10
  Bosea sp. OAE506 ABIE41_RS01370 TRAP transporter large permease insig. 34 12
  Azospirillum sp. SherDot2 MPMX19_05803 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 28 16
  Bosea sp. OAE506 ABIE41_RS07820 TRAP transporter large permease insig. 28 16
  Bosea sp. OAE506 ABIE41_RS23665 TRAP transporter large permease insig. 37 10
  Variovorax sp. SCN45 GFF1830 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 insig. 31 15
  Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 33 10
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5526 TRAP-type C4-dicarboxylate transport system, large permease component cofit 35 13