Homologs of GFF1339 from Xanthobacter sp. DMC5

ATP-dependent RNA helicase RhlE
SEED: ATP-dependent RNA helicase Atu1833

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF1339 ATP-dependent RNA helicase RhlE insig. 100 100
o Bosea sp. OAE506 ABIE41_RS16930 DEAD/DEAH box helicase strong 65 99
o Rhodopseudomonas palustris CGA009 TX73_012805 DEAD/DEAH box helicase strong 76 69
  Agrobacterium fabrum C58 Atu1833 ATP-dependent RNA helicase no data 71 74
  Rhizobium sp. OAE497 ABIE40_RS10055 DEAD/DEAH box helicase sig. 71 72
o Sinorhizobium meliloti 1021 SMc00522 ATP-dependent RNA helicase strong 63 88
o Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 59 89
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 61 75
o Caulobacter crescentus NA1000 CCNA_01923 ATP-dependent RNA helicase strong 65 68
o Caulobacter crescentus NA1000 Δfur CCNA_01923 ATP-dependent RNA helicase cofit 65 68
  Dinoroseobacter shibae DFL-12 Dshi_1333 DEAD/DEAH box helicase domain protein (RefSeq) strong 63 71
  Phaeobacter inhibens DSM 17395 PGA1_c10590 putative ATP-dependent RNA helicase RhlE insig. 64 70
o Magnetospirillum magneticum AMB-1 AMB_RS07010 ATP-dependent helicase strong 62 77
  Rhodospirillum rubrum S1H Rru_A2718 DEAD/DEAH box helicase (NCBI) no data 52 99
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04615 DEAD/DEAH box helicase insig. 65 68
  Sphingobium sp. HT1-2 GFF3480 ATP-dependent RNA helicase Atu1833 cofit 61 70
o Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 64 70
o Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 46 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 49 79
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 43 96
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 52 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 52 69
o Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 47 83
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 52 69
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 47 85
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 51 69
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 50 69
o Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 48 79
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 40 95
o Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 46 83
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 45 85
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 50 68
  Sinorhizobium meliloti 1021 SM_b20880 ATP-dependent RNA helicase strong 45 91
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 50 69
  Agrobacterium fabrum C58 Atu2333 ATP-dependent RNA helicase strong 43 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 50 69
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 50 69
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 49 69
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 49 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 51 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 48 72
  Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 47 69
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 47 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 48 69
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 47 69
  Azospirillum sp. SherDot2 MPMX19_02097 ATP-dependent RNA helicase RhlE insig. 49 69
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 49 69
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 48 69
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 46 80
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 42 80
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 50 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 47 71
  Xanthobacter sp. DMC5 GFF3462 ATP-dependent RNA helicase RhlE insig. 45 83
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 50 68
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 47 79
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 42 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 48 69
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 48 69
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 45 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 49 69
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 50 69
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 49 69
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 45 82
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 48 69
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 50 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 49 69
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 49 69
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00535 DEAD/DEAH box helicase no data 43 86
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 48 72
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0964 Superfamily II DNA and RNA helicases sig. 42 89
  Rhodopseudomonas palustris CGA009 TX73_019020 DEAD/DEAH box helicase insig. 42 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 48 69
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 47 70
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 48 69
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 45 84
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 48 69
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 45 82
  Phocaeicola dorei CL03T12C01 ABI39_RS02170 DEAD/DEAH box helicase insig. 45 80
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 44 84
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 48 69
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 48 67
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) insig. 42 96
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 43 82
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 43 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 43 83
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase sig. 40 95
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 46 69
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 49 69
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02855 DEAD/DEAH box helicase sig. 48 69
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 47 69
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 46 69
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 40 86
  Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 45 73
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 49 69
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 46 82
  Dechlorosoma suillum PS Dsui_1351 DNA/RNA helicase, superfamily II strong 41 87
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 48 70
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 48 70
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 48 70