Homologs of GEMAOFIL_03099 from Pseudomonas lactucae CFBP13502

'3'-5' exonuclease DinG' transl_table=11
SEED: DinG family ATP-dependent helicase CPE1197

100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03099 '3'-5' exonuclease DinG' transl_table=11 insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS15300 ATP-dependent DNA helicase insig. 90 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15300 ATP-dependent DNA helicase insig. 90 100
o Pseudomonas simiae WCS417 PS417_13500 ATP-dependent DNA helicase strong 90 100
o Pseudomonas fluorescens FW300-N2E3 AO353_24755 ATP-dependent DNA helicase sig. 79 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4935 DinG family ATP-dependent helicase CPE1197 sig. 78 100
o Pseudomonas fluorescens FW300-N2C3 AO356_26990 ATP-dependent DNA helicase sig. 78 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1225 DinG family ATP-dependent helicase CPE1197 strong 78 99
o Pseudomonas sp. DMC3 GFF2844 3'-5' exonuclease DinG insig. 76 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3086 DinG family ATP-dependent helicase CPE1197 insig. 77 100
o Pseudomonas sp. RS175 PFR28_02114 '3'-5' exonuclease DinG' transl_table=11 insig. 76 99
o Pseudomonas syringae pv. syringae B728a Psyr_2909 DEAD_2 insig. 73 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2909 DEAD_2 insig. 73 99
o Pseudomonas sp. SVBP6 COO64_RS25380 ATP-dependent DNA helicase insig. 67 100
o Pseudomonas stutzeri RCH2 Psest_2236 Rad3-related DNA helicases strong 67 100
o Pseudomonas putida KT2440 PP_2839 conserved protein of unknown function insig. 67 100
o Pseudomonas sp. BP01 JOY50_RS05630 ATP-dependent DNA helicase insig. 67 99
o Pseudomonas aeruginosa PA14 IKLFDK_09095 ATP-dependent DNA helicase insig. 66 99
o Paraburkholderia graminis OAS925 ABIE53_005889 DNA excision repair protein ERCC-2 insig. 61 100
o Burkholderia phytofirmans PsJN BPHYT_RS26935 ATP-dependent DNA helicase insig. 61 100
o Pseudomonas sp. S08-1 OH686_06000 DinG family ATP-dependent helicase insig. 62 100
o Acidovorax sp. GW101-3H11 Ac3H11_593 DinG family ATP-dependent helicase CPE1197 insig. 62 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02901 DNA excision repair protein ERCC-2 insig. 60 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS10715 ATP-dependent DNA helicase insig. 59 100
o Herbaspirillum seropedicae SmR1 HSERO_RS06500 ATP-dependent DNA helicase sig. 59 99
o Variovorax sp. OAS795 ABID97_RS16280 ATP-dependent DNA helicase insig. 56 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF225 DinG family ATP-dependent helicase CPE1197 insig. 57 99
o Variovorax sp. SCN45 GFF164 DinG family ATP-dependent helicase CPE1197 insig. 54 100
o Marinobacter adhaerens HP15 HP15_3721 Rad3-related DNA helicase sig. 50 99
  Pseudomonas stutzeri RCH2 Psest_0898 hypothetical protein insig. 63 22
  Methanococcus maripaludis JJ MMJJ_RS08075 ATP-dependent DNA helicase cofit 21 76
  Methanococcus maripaludis S2 MMP_RS06275 ATP-dependent DNA helicase sig. 21 76
  Shewanella oneidensis MR-1 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) insig. 28 37
  Shewanella sp. ANA-3 Shewana3_1859 helicase c2 (RefSeq) insig. 24 75
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19750 ATP-dependent DNA helicase insig. 25 55
  Kangiella aquimarina DSM 16071 B158DRAFT_2492 Rad3-related DNA helicases cofit 22 75
  Mycobacterium tuberculosis H37Rv Rv1329c Probable ATP-dependent helicase DinG insig. 26 32
  Shewanella loihica PV-4 Shew_2196 helicase c2 (RefSeq) strong 28 30
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 insig. 25 29
  Ralstonia solanacearum PSI07 RPSI07_RS15960 ATP-dependent DNA helicase no data 29 30
  Castellaniella sp019104865 MT123 ABCV34_RS01875 ATP-dependent DNA helicase insig. 25 75
  Shewanella amazonensis SB2B Sama_1940 ATP-dependent helicase DinG (RefSeq) strong 28 26
  Cupriavidus basilensis FW507-4G11 RR42_RS07580 helicase strong 29 30
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01530 ATP-dependent DNA helicase insig. 29 30
  Ralstonia solanacearum UW163 UW163_RS14840 ATP-dependent DNA helicase insig. 29 30
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03855 ATP-dependent DNA helicase DinG insig. 29 32
  Shewanella amazonensis SB2B Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) sig. 22 57
  Ralstonia sp. UNC404CL21Col ABZR87_RS13325 ATP-dependent DNA helicase insig. 30 30
  Ralstonia solanacearum GMI1000 RS_RS08195 ATP-dependent DNA helicase insig. 28 30
  Burkholderia phytofirmans PsJN BPHYT_RS12495 helicase insig. 24 58
  Rhodanobacter denitrificans MT42 LRK55_RS10710 ATP-dependent DNA helicase DinG cofit 29 32
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11005 ATP-dependent DNA helicase DinG insig. 29 32
  Alteromonas macleodii MIT1002 MIT1002_02593 putative ATP-dependent helicase DinG insig. 26 31
  Enterobacter asburiae PDN3 EX28DRAFT_0750 Rad3-related DNA helicases insig. 23 74
  Shewanella loihica PV-4 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) strong 25 30
  Shewanella sp. ANA-3 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) cofit 28 30
  Variovorax sp. OAS795 ABID97_RS14180 ATP-dependent DNA helicase insig. 30 27
  Rhodanobacter sp. FW510-T8 OKGIIK_12870 dinG ATP-dependent DNA helicase DinG insig. 28 32
  Variovorax sp. SCN45 GFF986 DinG family ATP-dependent helicase YoaA insig. 30 27
  Pseudomonas sp. BP01 JOY50_RS24145 dinG ATP-dependent DNA helicase DinG insig. 26 32
  Lysobacter sp. OAE881 ABIE51_RS05195 ATP-dependent DNA helicase insig. 32 19
  Rhodanobacter denitrificans MT42 LRK55_RS12465 ATP-dependent DNA helicase insig. 32 19
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12765 ATP-dependent DNA helicase insig. 32 19
  Marinobacter adhaerens HP15 HP15_1856 helicase c2 strong 26 30
  Pseudomonas putida KT2440 PP_1125 putative Helicase sig. 26 32
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16845 ATP-dependent DNA helicase DinG cofit 28 30
  Fusobacterium nucleatum SB010 HUW76_04565 ATP-dependent DNA helicase strong 20 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS06060 ATP-dependent DNA helicase insig. 32 16
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15830 ATP-dependent DNA helicase insig. 30 21
  Acidovorax sp. GW101-3H11 Ac3H11_4422 ATP-dependent helicase DinG/Rad3 no data 23 57
  Pseudomonas fluorescens FW300-N2E3 AO353_17020 ATP-dependent DNA helicase DinG strong 27 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 sig. 26 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 no data 26 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 strong 26 32
  Vibrio cholerae E7946 ATCC 55056 CSW01_09930 ATP-dependent DNA helicase insig. 22 76
  Rhodanobacter sp. FW510-T8 OKGIIK_02195 dinG helicase insig. 29 21
  Methylophilus sp. DMC18 GFF2564 putative ATP-dependent DNA helicase YoaA insig. 29 21
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4872 DinG family ATP-dependent helicase YoaA insig. 29 30
  Shewanella oneidensis MR-1 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) strong 27 30
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01464 ATP-dependent DNA helicase DinG cofit 26 32
  Pseudomonas fluorescens FW300-N2C3 AO356_05425 ATP-dependent DNA helicase DinG strong 26 32
  Paraburkholderia graminis OAS925 ABIE53_002724 ATP-dependent DNA helicase DinG insig. 31 16
  Pseudomonas simiae WCS417 PS417_06510 ATP-dependent DNA helicase DinG strong 26 32
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00533 ATP-dependent DNA helicase DinG insig. 32 16
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA insig. 32 19
  Enterobacter sp. TBS_079 MPMX20_02714 putative ATP-dependent DNA helicase YoaA insig. 31 14
  Dickeya dadantii 3937 DDA3937_RS11240 ATP-dependent DNA helicase insig. 30 16
  Dickeya dianthicola 67-19 HGI48_RS11275 ATP-dependent DNA helicase insig. 30 16
  Dickeya dianthicola ME23 DZA65_RS11620 ATP-dependent DNA helicase insig. 30 16
  Pseudomonas fluorescens SBW25 PFLU_RS06540 ATP-dependent DNA helicase DinG insig. 26 32
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06540 ATP-dependent DNA helicase DinG insig. 26 32
  Pseudomonas sp. DMC3 GFF2161 ATP-dependent DNA helicase DinG cofit 26 32
  Pseudomonas sp. SVBP6 COO64_RS17020 dinG ATP-dependent DNA helicase DinG cofit 26 32
  Klebsiella michiganensis M5al BWI76_RS17815 ATP-dependent helicase insig. 25 32
  Klebsiella pneumoniae MKP103 KDGMDA_25135 ATP-dependent helicase insig. 31 14
  Pseudomonas sp. RS175 PFR28_00520 ATP-dependent DNA helicase DinG insig. 30 15
  Pseudomonas stutzeri RCH2 Psest_2857 Rad3-related DNA helicases strong 28 32
  Pseudomonas aeruginosa PA14 IKLFDK_04780 ATP-dependent DNA helicase DinG insig. 27 32
  Vibrio cholerae E7946 ATCC 55056 CSW01_09290 ATP-dependent DNA helicase DinG insig. 25 20
  Variovorax sp. SCN45 GFF986 DinG family ATP-dependent helicase YoaA insig. 25 21