Homologs of Echvi_4348 from Echinicola vietnamensis KMM 6221, DSM 17526

Site-specific recombinase XerD
SEED: Mobile element protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0028 Site-specific recombinase XerD no data 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2549 Site-specific recombinase XerD no data 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4348 Site-specific recombinase XerD no data 100 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS44390 site-specific integrase insig. 44 99
o Burkholderia phytofirmans PsJN BPHYT_RS01135 integrase insig. 38 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS44350 tyrosine-type recombinase/integrase no data 38 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS42895 tyrosine-type recombinase/integrase insig. 35 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS42360 tyrosine-type recombinase/integrase insig. 35 99
  Dinoroseobacter shibae DFL-12 Dshi_3696 integrase family protein (RefSeq) no data 33 94
o Dinoroseobacter shibae DFL-12 Dshi_4006 integrase family protein (RefSeq) no data 33 94
  Sinorhizobium meliloti 1021 SMa1620 integrase/recombinase no data 33 94
o Sinorhizobium meliloti 1021 SMa2175 Integrase/recombinase no data 33 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS39870 tyrosine-type recombinase/integrase insig. 33 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS44555 tyrosine-type recombinase/integrase insig. 31 97
o Bacteroides thetaiotaomicron VPI-5482 BT2634 putative integrase/recombinase (NCBI ptt file) insig. 31 88
  Bifidobacterium breve UCC2003 BBR_RS11760 integrase insig. 30 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS40105 tyrosine-type recombinase/integrase insig. 39 59
  Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 31 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 32 92
  Caulobacter crescentus NA1000 CCNA_00349 integrase/recombinase, XerC-CodV family strong 30 90
  Caulobacter crescentus NA1000 Δfur CCNA_00349 integrase/recombinase, XerC-CodV family cofit 30 90
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD strong 32 82
  Variovorax sp. OAS795 ABID97_RS18470 site-specific integrase insig. 36 56
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD strong 32 85
  Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 29 82
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 29 82
  Dinoroseobacter shibae DFL-12 Dshi_5002 xerC hypothetical protein (NCBI) no data 29 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 29 90
  Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 30 82
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 30 82
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 30 82
  Rhizobium sp. OAE497 ABIE40_RS17950 tyrosine recombinase XerC insig. 30 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 31 82
  Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 31 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 30 82
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 29 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 31 82
  Xanthobacter sp. DMC5 GFF2054 Tyrosine recombinase XerC no data 31 91
  Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 30 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 30 82
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 31 82
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 30 82
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 30 82
  Sinorhizobium meliloti 1021 SMc03247 integrase/recombinase insig. 34 61
  Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 30 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 29 82
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 29 82
  Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 29 82
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 29 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 29 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD strong 30 86
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 30 86
  Pseudomonas orientalis W4I3 QF045_RS25085 site-specific tyrosine recombinase XerD cofit 30 82
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 29 85
  Cellulophaga baltica 18 M666_RS11310 site-specific tyrosine recombinase XerD sig. 32 85
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 31 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 31 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS02755 site-specific tyrosine recombinase XerD no data 29 82
  Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 29 82
  Pseudomonas segetis P6 ACVTMO_RS07795 xerD site-specific tyrosine recombinase XerD strong 29 82
  Pseudomonas aeruginosa MRSN321 DY961_RS14280 xerD;go_function=site-specific site-specific tyrosine recombinase XerD insig. 30 82
  Pseudomonas aeruginosa PA14 IKLFDK_19085 site-specific tyrosine recombinase XerD no data 30 82
  Pseudomonas aeruginosa PUPa3 DQ20_RS42845 xerD;go_function=site-specific site-specific tyrosine recombinase XerD insig. 30 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03195 xerD site-specific tyrosine recombinase XerD no data 29 88
  Azospirillum brasilense Sp245 AZOBR_RS03965 tyrosine recombinase XerC no data 28 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 31 86
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 30 82
  Cupriavidus basilensis FW507-4G11 RR42_RS03345 recombinase XerD sig. 29 82
  Methylophilus sp. DMC18 GFF2342 Tyrosine recombinase XerD insig. 29 85
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 29 88
  Sinorhizobium meliloti 1021 SMc02489 site-specific tyrosine recombinase XerC no data 30 85
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 29 88
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 29 90
  Acidovorax sp. GW101-3H11 Ac3H11_302 Tyrosine recombinase XerD no data 28 82
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 29 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 28 82
  Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 28 82
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD strong 29 90
  Acinetobacter baumannii LAC-4 RR41_RS17765 site-specific tyrosine recombinase XerD no data 29 83
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 29 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 27 86
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 29 90
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 29 86
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 29 90
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 29 90
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD insig. 29 90
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 29 90
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 29 90
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 29 90
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 29 90
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 29 90
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 29 90
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 29 90
  Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 28 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 28 90
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 27 88
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 27 83
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 29 82
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 29 90
  Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 28 82