Homologs of CSW01_17870 from Vibrio cholerae E7946 ATCC 55056

GIY-YIG nuclease family protein
SEED: COG2827: putative endonuclease containing a URI domain
KEGG: putative endonuclease

78 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_17870 GIY-YIG nuclease family protein insig. 100 100
  Enterobacter sp. TBS_079 MPMX20_04059 hypothetical protein insig. 70 78
  Escherichia coli BW25113 b3155 yhbQ hypothetical protein (NCBI) insig. 66 79
o Escherichia coli ECRC62 BNILDI_01540 yhbQ DNA damage response exodeoxyribonuclease YhbQ cofit 61 87
  Enterobacter asburiae PDN3 EX28DRAFT_3204 Predicted endonuclease containing a URI domain insig. 70 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00545 hypothetical protein insig. 65 79
  Escherichia coli BL21 ECD_03022 GIY-YIG nuclease superfamily protein insig. 65 79
  Escherichia fergusonii Becca EFB2_00668 hypothetical protein insig. 65 79
  Escherichia coli Nissle 1917 ECOLIN_RS18125 DNA damage response exodeoxyribonuclease YhbQ insig. 65 79
  Escherichia coli ECOR38 HEPCGN_17065 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 65 79
  Escherichia coli ECRC100 OKFHMN_18190 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 65 79
  Escherichia coli ECRC101 MCAODC_08710 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 65 79
  Escherichia coli ECRC102 NIAGMN_15950 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 65 79
  Escherichia coli ECRC98 JDDGAC_21815 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 65 79
  Escherichia coli ECRC99 KEDOAH_09960 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 65 79
  Klebsiella michiganensis M5al BWI76_RS24955 hypothetical protein insig. 68 78
  Escherichia coli ECOR27 NOLOHH_09990 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 64 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1513 FIG137864: putative endonuclease containing a URI domain insig. 63 79
  Pectobacterium carotovorum WPP14 HER17_RS18145 GIY-YIG nuclease family protein cofit 65 79
o Dickeya dianthicola 67-19 HGI48_RS03305 GIY-YIG nuclease family protein insig. 62 83
  Dickeya dianthicola ME23 DZA65_RS03300 GIY-YIG nuclease family protein insig. 63 78
  Serratia liquefaciens MT49 IAI46_02030 GIY-YIG nuclease family protein insig. 62 78
  Dickeya dadantii 3937 DDA3937_RS03130 GIY-YIG nuclease family protein insig. 57 85
  Erwinia amylovora T8 OLJFJH_07290 putative endonuclease GIY-YIG superfamily insig. 61 75
  Rahnella sp. WP5 EX31_RS08465 GIY-YIG nuclease family protein insig. 57 76
o Pantoea sp. MT58 IAI47_16950 GIY-YIG nuclease family protein insig. 55 81
  Shewanella sp. ANA-3 Shewana3_0136 excinuclease ABC subunit C (RefSeq) insig. 54 78
o Pseudomonas sp. RS175 PFR28_03536 hypothetical protein insig. 51 92
  Marinobacter adhaerens HP15 HP15_2558 putative nuclease insig. 58 74
o Erwinia tracheiphila SCR3 LU632_RS20990 GIY-YIG nuclease family protein insig. 49 86
o Lysobacter sp. OAE881 ABIE51_RS14940 GIY-YIG nuclease family protein insig. 45 88
o Pseudomonas stutzeri RCH2 Psest_1218 Predicted endonuclease containing a URI domain insig. 54 81
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5411 FIG00955494: hypothetical protein insig. 51 90
o Pseudomonas putida KT2440 PP_0972 UPF0213 protein PP_0972 insig. 52 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU3309 endo/excinuclease amino terminal domain protein (TIGR) sig. 47 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_908 FIG00955494: hypothetical protein no data 54 81
o Pseudomonas fluorescens FW300-N2C3 AO356_17425 GIY-YIG nuclease insig. 49 90
  Desulfovibrio vulgaris Miyazaki F DvMF_2126 Excinuclease ABC C subunit domain protein (RefSeq) insig. 44 80
  Pseudomonas fluorescens FW300-N2E3 AO353_04580 GIY-YIG nuclease insig. 52 81
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1705 FIG00955494: hypothetical protein insig. 51 86
o Pseudomonas fluorescens SBW25 PFLU_RS05060 GIY-YIG nuclease family protein insig. 48 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05060 GIY-YIG nuclease family protein insig. 48 92
  Shewanella loihica PV-4 Shew_0038 excinuclease ABC subunit C (RefSeq) insig. 51 78
o Pseudomonas simiae WCS417 PS417_04990 GIY-YIG nuclease insig. 50 85
o Paraburkholderia sabiae LMG 24235 QEN71_RS24905 GIY-YIG nuclease family protein insig. 39 86
  Shewanella amazonensis SB2B Sama_0145 endonuclease (RefSeq) insig. 49 80
  Pseudomonas sp. BP01 JOY50_RS11230 GIY-YIG nuclease family protein insig. 53 78
  Pseudomonas sp. DMC3 GFF1943 hypothetical protein insig. 53 78
  Pseudomonas syringae pv. syringae B728a Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 52 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 52 78
  Shewanella oneidensis MR-1 SO0145 hypothetical URI domain endonuclease (NCBI ptt file) insig. 49 78
o Pseudomonas sp. SVBP6 COO64_RS04380 GIY-YIG nuclease family protein insig. 49 82
o Kangiella aquimarina DSM 16071 B158DRAFT_1379 Predicted endonuclease containing a URI domain insig. 39 85
  Burkholderia phytofirmans PsJN BPHYT_RS05470 excinuclease ABC subunit C insig. 38 85
  Paraburkholderia graminis OAS925 ABIE53_001343 putative endonuclease sig. 42 78
o Pseudomonas sp. S08-1 OH686_17835 Endo/excinuclease domain protein insig. 54 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00216 putative endonuclease no data 42 78
o Dechlorosoma suillum PS Dsui_2028 putative endonuclease containing a URI domain no data 46 69
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1380.1 COG2827: putative endonuclease containing a URI domain insig. 34 93
o Cupriavidus basilensis FW507-4G11 RR42_RS36170 hypothetical protein insig. 52 51
  Alteromonas macleodii MIT1002 MIT1002_02877 GIY-YIG nuclease superfamily protein insig. 46 78
  Pseudomonas aeruginosa PA14 IKLFDK_19855 UPF0213 protein PA3854 insig. 48 79
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00190 GIY-YIG nuclease family protein insig. 42 73
  Acidovorax sp. GW101-3H11 Ac3H11_2277 putative periplasmic protein kinase ArgK and related GTPases of G3E family sig. 43 79
o Variovorax sp. OAS795 ABID97_RS06665 GIY-YIG nuclease family protein insig. 39 83
  Rhodanobacter sp. FW510-T8 OKGIIK_00785 GIY-YIG nuclease family protein insig. 33 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00620 GIY-YIG nuclease family protein insig. 30 78
  Rhodanobacter sp. FW510-T8 OKGIIK_11815 GIY-YIG domain-containing protein insig. 40 74
  Rhodanobacter denitrificans MT42 LRK55_RS11850 GIY-YIG nuclease family protein insig. 40 72
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12115 GIY-YIG nuclease family protein insig. 40 72
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16485 GIY-YIG nuclease family protein insig. 39 74
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1064 Predicted endonuclease containing a URI domain insig. 34 84
  Magnetospirillum magneticum AMB-1 AMB_RS11455 GIY-YIG nuclease family protein cofit 42 65
  Fusobacterium nucleatum SB010 HUW76_09640 GIY-YIG nuclease family protein cofit 30 78
  Magnetospirillum magneticum AMB-1 AMB_RS20825 excinuclease ABC subunit C insig. 30 80
  Bosea sp. OAE506 ABIE41_RS17150 GIY-YIG nuclease family protein insig. 35 76
  Herbaspirillum seropedicae SmR1 HSERO_RS02335 excinuclease ABC subunit C insig. 29 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1342 Predicted endonuclease containing a URI domain insig. 27 77