Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12655 | | DNA-binding response regulator | insig. | 100 | 100 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_20205 | | DNA-binding response regulator | cofit | 59 | 100 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS12285 | | response regulator transcription factor | insig. | 54 | 99 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_07315 | | DNA-binding response regulator | insig. | 50 | 98 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08260 | | response regulator transcription factor | insig. | 49 | 99 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS05880 | | DNA-binding response regulator | strong | 51 | 98 |
o | Phocaeicola dorei CL03T12C01 | ABI39_RS19350 | | response regulator transcription factor | insig. | 49 | 99 |
| Bacteroides stercoris CC31F | HMPREF1181_RS11775 | | response regulator transcription factor | cofit | 48 | 99 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3559 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 47 | 98 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1397 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 47 | 98 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0928 | | two-component system response regulator (NCBI ptt file) | sig. | 46 | 98 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00751 | | response regulator receiver domain protein | insig. | 45 | 98 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS17705 | | response regulator transcription factor | insig. | 45 | 98 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS18625 | | response regulator transcription factor | insig. | 45 | 98 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS14930 | | response regulator transcription factor | insig. | 44 | 98 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16690 | | response regulator transcription factor | insig. | 40 | 98 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15210 | | DNA-binding response regulator | strong | 40 | 98 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS00370 | | DNA-binding response regulator | insig. | 36 | 98 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS19190 | | response regulator transcription factor | cofit | 35 | 98 |
| Castellaniella sp019104865 MT123 | ABCV34_RS15610 | | response regulator transcription factor | insig. | 36 | 100 |
o | Lysobacter sp. OAE881 | ABIE51_RS00875 | | response regulator transcription factor | strong | 36 | 99 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS21725 | | heavy metal response regulator transcription factor | insig. | 40 | 97 |
| Ralstonia solanacearum PSI07 | RPSI07_RS01875 | | DNA-binding response regulator | insig. | 39 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS30960 | | transcriptional regulator | strong | 38 | 97 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3523 | | Two-component system response regulator QseB | insig. | 38 | 100 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS09450 | | response regulator transcription factor | insig. | 36 | 97 |
| Ralstonia solanacearum GMI1000 | RS_RS19510 | | DNA-binding response regulator | sig. | 38 | 97 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS21280 | | DNA-binding response regulator | insig. | 38 | 97 |
| Ralstonia solanacearum UW163 | UW163_RS22425 | | DNA-binding response regulator | insig. | 38 | 97 |
| Variovorax sp. SCN45 | GFF11 | | Two-component transcriptional response regulator, OmpR family | insig. | 36 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS18790 | | transcriptional regulator | insig. | 36 | 98 |
| Serratia liquefaciens MT49 | IAI46_12390 | | heavy metal response regulator transcription factor | insig. | 37 | 97 |
o | Alteromonas macleodii MIT1002 | MIT1002_03258 | | Swarming motility regulation protein RssB | insig. | 36 | 99 |
| Pseudomonas simiae WCS417 | PS417_10270 | | transcriptional regulator | insig. | 36 | 100 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4296 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 35 | 99 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3698 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | cofit | 37 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12420 | | transcriptional regulator | insig. | 37 | 97 |
| Pseudomonas sp. S08-1 | OH686_04665 | | Two-component system response regulator QseB | insig. | 37 | 97 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_08235 | | DNA-binding response regulator | cofit | 35 | 98 |
o | Shewanella loihica PV-4 | Shew_0583 | | two component transcriptional regulator (RefSeq) | insig. | 37 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1508 | | DNA-binding response regulator | insig. | 35 | 100 |
| Pectobacterium carotovorum WPP14 | HER17_RS13650 | | heavy metal response regulator transcription factor | insig. | 37 | 100 |
| Variovorax sp. SCN45 | GFF5812 | | DNA-binding heavy metal response regulator | insig. | 36 | 97 |
| Rhodanobacter denitrificans MT42 | LRK55_RS05740 | | response regulator transcription factor | no data | 35 | 99 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05985 | | response regulator transcription factor | cofit | 35 | 99 |
| Klebsiella michiganensis M5al | BWI76_RS06230 | | DNA-binding response regulator | insig. | 34 | 98 |
| Fusobacterium nucleatum SB010 | HUW76_07205 | | response regulator transcription factor | strong | 36 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS31535 | | transcriptional regulator | insig. | 35 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS19450 | | two-component system response regulator PmrA | insig. | 35 | 99 |
o | Shewanella amazonensis SB2B | Sama_3006 | | response regulator receiver protein (RefSeq) | insig. | 37 | 97 |
| Variovorax sp. SCN45 | GFF4686 | | Copper-sensing two-component system response regulator CusR | insig. | 36 | 97 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0990 | | two-component system response regulator (NCBI ptt file) | sig. | 34 | 98 |
o | Shewanella sp. ANA-3 | Shewana3_0615 | | two component transcriptional regulator (RefSeq) | sig. | 38 | 97 |
| Escherichia coli BL21 | ECD_00347 | | response regulator in two-component regulatory system with PhoR | insig. | 33 | 99 |
| Escherichia fergusonii Becca | EFB2_03658 | | Phosphate regulon transcriptional regulatory protein PhoB | insig. | 33 | 99 |
| Escherichia coli ECOR27 | NOLOHH_01475 | phoB | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Escherichia coli ECOR38 | HEPCGN_07185 | phoB | phosphate response regulator transcription factor PhoB | cofit | 33 | 99 |
| Escherichia coli ECRC101 | OKFHMN_08545 | phoB | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Escherichia coli ECRC101 | MCAODC_27770 | phoB | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Escherichia coli ECRC102 | NIAGMN_06600 | phoB | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Escherichia coli ECRC62 | BNILDI_22890 | phoB | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Escherichia coli ECRC98 | JDDGAC_12200 | phoB | phosphate response regulator transcription factor PhoB | no data | 33 | 99 |
| Escherichia coli ECRC99 | KEDOAH_19420 | phoB | phosphate response regulator transcription factor PhoB | no data | 33 | 99 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03277 | | Phosphate regulon transcriptional regulatory protein PhoB | insig. | 33 | 99 |
| Escherichia coli Nissle 1917 | ECOLIN_RS02410 | | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Escherichia coli BW25113 | b0399 | phoB | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) (NCBI) | sig. | 33 | 99 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15000 | | response regulator transcription factor | strong | 34 | 96 |
| Serratia liquefaciens MT49 | IAI46_04775 | | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Serratia liquefaciens MT49 | IAI46_16745 | | heavy metal response regulator transcription factor | insig. | 37 | 100 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c14360 | | cell cycle response regulator | strong | 35 | 97 |
| Dickeya dianthicola ME23 | DZA65_RS20570 | | two-component system response regulator PmrA | insig. | 34 | 99 |
o | Shewanella oneidensis MR-1 | SO0622 | | DNA-binding response regulator (NCBI ptt file) | insig. | 37 | 97 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_00335 | | Two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR | insig. | 34 | 98 |
| Dickeya dadantii 3937 | DDA3937_RS19350 | | two-component system response regulator PmrA | insig. | 34 | 99 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18360 | | response regulator transcription factor | strong | 35 | 99 |
| Mycobacterium tuberculosis H37Rv | Rv0981 | | Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein) | insig. | 33 | 100 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04180 | | two component transcriptional regulator, winged helix family | sig. | 35 | 97 |
o | Sinorhizobium meliloti 1021 | SM_b21210 | | two-component response regulator protein | insig. | 35 | 97 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_02865 | | transcriptional regulator | strong | 33 | 98 |
| Pseudomonas stutzeri RCH2 | Psest_3533 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 36 | 98 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3709 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 35 | 97 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3709 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 35 | 97 |
| Pseudomonas fluorescens SBW25 | PFLU_RS07760 | | heavy metal response regulator transcription factor | insig. | 35 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS07760 | | heavy metal response regulator transcription factor | insig. | 35 | 97 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2575 | | phosphate regulon transcriptional regulatory protein PhoB | cofit | 34 | 99 |
| Enterobacter sp. TBS_079 | MPMX20_00986 | | Phosphate regulon transcriptional regulatory protein PhoB | sig. | 34 | 99 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00180 | | response regulator receiver domain protein | sig. | 34 | 98 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1369 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 34 | 97 |
| Alteromonas macleodii MIT1002 | MIT1002_01421 | | Transcriptional regulatory protein PhoP | insig. | 31 | 98 |
| Pseudomonas sp. S08-1 | OH686_00055 | | Two-component system response regulator QseB | insig. | 36 | 100 |
| Rahnella sp. WP5 | EX31_RS08605 | | two-component system response regulator PmrA | insig. | 35 | 98 |
| Rhodopseudomonas palustris CGA009 | TX73_009870 | | response regulator transcription factor | insig. | 35 | 97 |
| Serratia liquefaciens MT49 | IAI46_07680 | | response regulator transcription factor | insig. | 34 | 100 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_00635 | ompR | DNA-binding response regulator | no data | 34 | 99 |
| Shewanella amazonensis SB2B | Sama_3303 | | response regulator receiver protein (RefSeq) | insig. | 34 | 98 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2397 | | Two-component system response regulator QseB | sig. | 33 | 98 |
| Bacteroides stercoris CC31F | HMPREF1181_RS01000 | | response regulator transcription factor | insig. | 32 | 98 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1469 | | Transcriptional regulatory protein basR/pmrA | cofit | 35 | 100 |
| Dickeya dadantii 3937 | DDA3937_RS05425 | | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |
| Dickeya dianthicola 67-19 | HGI48_RS05485 | | phosphate response regulator transcription factor PhoB | insig. | 33 | 99 |