Homologs of Atu5023 from Agrobacterium fabrum C58

hypothetical protein
SEED: DNA repair protein RecN
KEGG: putative ATP-dependent endonuclease of the OLD family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu5023 hypothetical protein insig. 100 100
  Pseudomonas sp. BP01 JOY50_RS12300 ATP-dependent endonuclease insig. 32 76
o Rahnella sp. WP5 EX31_RS22910 AAA family ATPase insig. 30 100
o Dickeya dianthicola 67-19 HGI48_RS04110 AAA family ATPase insig. 30 100
o Castellaniella sp019104865 MT123 ABCV34_RS15850 AAA family ATPase insig. 30 100
o Pseudomonas simiae WCS417 PS417_20460 chromosome segregation protein SMC insig. 30 87
o Cellulophaga baltica 18 M666_RS16730 AAA family ATPase insig. 29 91
o Ralstonia solanacearum PSI07 RPSI07_RS21970 ATP-dependent endonuclease insig. 27 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS07200 AAA family ATPase insig. 30 77
  Ralstonia solanacearum PSI07 RPSI07_RS07250 ATP-dependent endonuclease insig. 26 99
o Enterobacter asburiae PDN3 EX28DRAFT_0458 Predicted ATP-dependent endonuclease of the OLD family insig. 25 99
  Azospirillum sp. SherDot2 MPMX19_02694 hypothetical protein insig. 32 43
  Variovorax sp. SCN45 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family insig. 29 56
  Fusobacterium nucleatum SB010 HUW76_01425 AAA family ATPase cofit 33 36
  Pseudomonas aeruginosa PA14 IKLFDK_00865 ATP-dependent endonuclease insig. 30 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4446 Predicted ATP-dependent endonuclease of the OLD family insig. 28 47
  Azospirillum brasilense Sp245 AZOBR_RS17690 ATP-dependent endonuclease insig. 29 35
o Bifidobacterium breve UCC2003 BBR_RS18380 hypothetical protein cofit 25 84
  Burkholderia phytofirmans PsJN BPHYT_RS32050 ATP-dependent endonuclease insig. 32 33
  Azospirillum sp. SherDot2 MPMX19_02707 hypothetical protein cofit 29 43
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00595 hypothetical protein no data 22 56
  Cupriavidus basilensis FW507-4G11 RR42_RS18765 ATP-dependent endonuclease sig. 27 38
  Pseudomonas putida KT2440 PP_3680 conserved protein of unknown function sig. 21 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_16950 ATP-dependent endonuclease insig. 25 37
  Pseudomonas sp. DMC3 GFF3371 hypothetical protein cofit 22 76
  Pseudomonas aeruginosa PUPa3 DQ20_RS32145 AAA family ATPase insig. 26 66
  Methanococcus maripaludis S2 MMP_RS01770 ATP-dependent endonuclease insig. 24 42
  Marinobacter adhaerens HP15 HP15_1195 protein containing RecF/RecN/SMC protein, N-terminal domain insig. 22 78
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04370 ATP-dependent endonuclease cofit 24 28
  Dickeya dianthicola 67-19 HGI48_RS07150 AAA family ATPase insig. 24 76
o Dickeya dadantii 3937 DDA3937_RS09545 ATP-dependent endonuclease insig. 23 32
  Erwinia amylovora T8 OLJFJH_16235 ATP-dependent endonuclease insig. 26 30
  Pantoea sp. MT58 IAI47_12960 ATP-dependent endonuclease sig. 24 28
  Marinobacter adhaerens HP15 HP15_1533 chromosome segregation protein SMC strong 30 16
  Dickeya dianthicola ME23 DZA65_RS09870 ATP-dependent endonuclease insig. 24 30
  Rahnella sp. WP5 EX31_RS18580 ATP-dependent endonuclease insig. 24 30
  Dickeya dianthicola 67-19 HGI48_RS09560 ATP-dependent endonuclease insig. 24 30
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23955 hypothetical protein insig. 29 28
  Enterobacter asburiae PDN3 EX28DRAFT_2056 Predicted ATP-dependent endonuclease of the OLD family cofit 26 32
  Pectobacterium carotovorum WPP14 HER17_RS12415 ATP-dependent endonuclease cofit 24 30
  Enterobacter sp. TBS_079 MPMX20_01538 hypothetical protein sig. 26 30
  Xanthobacter sp. DMC5 GFF4545 hypothetical protein insig. 21 52
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4907 Predicted ATP-dependent endonuclease of the OLD family, YbjD subgroup insig. 23 33
  Escherichia coli BL21 ECD_00881 putative OLD family ATP-dependent endonuclease; DUF2813 family protein cofit 24 30
  Escherichia fergusonii Becca EFB2_03185 hypothetical protein insig. 24 30
  Escherichia coli ECOR27 NOLOHH_22215 ybjD Uncharacterized protein YbjD insig. 24 30
  Escherichia coli ECOR38 HEPCGN_22865 ybjD Uncharacterized protein YbjD insig. 24 30
  Escherichia coli ECRC100 OKFHMN_05820 ybjD Uncharacterized protein YbjD insig. 24 30
  Escherichia coli ECRC101 MCAODC_25035 ybjD Uncharacterized protein YbjD insig. 24 30
  Escherichia coli ECRC102 NIAGMN_03860 ybjD Uncharacterized protein YbjD insig. 24 30
  Escherichia coli ECRC62 BNILDI_20470 ybjD Uncharacterized protein YbjD cofit 24 30
  Escherichia coli ECRC98 JDDGAC_09455 ybjD Uncharacterized protein YbjD insig. 24 30
  Escherichia coli ECRC99 KEDOAH_22090 ybjD Uncharacterized protein YbjD no data 24 30
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02792 hypothetical protein insig. 24 30
  Escherichia coli Nissle 1917 ECOLIN_RS04665 ATP-dependent endonuclease no data 24 30
  Escherichia coli BW25113 b0876 ybjD conserved protein with nucleoside triphosphate hydrolase domain (NCBI) insig. 24 30
  Fusobacterium nucleatum SB010 HUW76_02425 AAA family ATPase cofit 25 32
  Acinetobacter baumannii LAC-4 RR41_RS15275 chromosome segregation protein SMC insig. 34 15
  Klebsiella pneumoniae MKP103 KDGMDA_17835 ATP-dependent endonuclease insig. 24 30
  Azospirillum sp. SherDot2 MPMX19_02707 hypothetical protein cofit 28 28
  Pseudomonas stutzeri RCH2 Psest_2510 chromosome segregation protein SMC, common bacterial type insig. 31 15
  Klebsiella michiganensis M5al BWI76_RS09590 ATP-dependent OLD family endonuclease sig. 23 30
  Serratia liquefaciens MT49 IAI46_08485 ATP-dependent endonuclease cofit 22 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12990 chromosome segregation protein SMC cofit 50 8
  Kangiella aquimarina DSM 16071 B158DRAFT_1775 condensin subunit Smc strong 29 16
  Pseudomonas sp. S08-1 OH686_02605 chromosome segregation protein SMC cofit 30 15
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3837 chromosome segregation protein SMC, common bacterial type insig. 51 8
  Acinetobacter radioresistens SK82 MPMX26_02462 Chromosome partition protein Smc insig. 33 15
  Pseudomonas syringae pv. syringae B728a Psyr_1817 condensin subunit Smc insig. 29 15
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1817 condensin subunit Smc insig. 29 15
  Pseudomonas fluorescens SBW25 PFLU_RS22490 chromosome segregation protein SMC insig. 29 15
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22490 chromosome segregation protein SMC insig. 29 15
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04320 Chromosome partition protein Smc insig. 29 15
  Pseudomonas orientalis W4I3 QF045_RS22680 chromosome segregation protein SMC cofit 29 15
  Pseudomonas simiae WCS417 PS417_20875 chromosome segregation protein SMC sig. 29 15
  Pseudomonas segetis P6 ACVTMO_RS11045 smc chromosome segregation protein SMC insig. 30 15
  Mycobacterium tuberculosis H37Rv Rv2922c Probable chromosome partition protein Smc sig. 50 7
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09880 chromosome segregation protein SMC no data 28 16
  Alteromonas macleodii MIT1002 MIT1002_01922 Chromosome partition protein Smc insig. 31 16
  Rhodanobacter denitrificans MT42 LRK55_RS18170 chromosome segregation protein SMC no data 28 16
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00270 chromosome segregation protein SMC no data 28 16
  Rhodanobacter sp. FW510-T8 OKGIIK_07040 smc chromosome segregation protein SMC sig. 28 16
  Bifidobacterium breve UCC2003 BBR_RS16840 chromosome segregation protein SMC insig. 48 7
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02850 chromosome segregation protein SMC no data 30 16
  Pseudomonas aeruginosa MRSN321 DY961_RS19255 smc;go_function=ATP chromosome segregation protein SMC sig. 30 14
  Pseudomonas aeruginosa PA14 IKLFDK_07280 chromosome segregation protein SMC sig. 30 14
  Pseudomonas aeruginosa PUPa3 DQ20_RS53390 smc;go_function=ATP chromosome segregation protein SMC insig. 30 14
  Xanthobacter sp. DMC5 GFF1411 hypothetical protein insig. 45 8
  Shewanella amazonensis SB2B Sama_1111 ATP-dependent OLD family endonuclease (RefSeq) insig. 29 30
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05245 chromosome segregation protein SMC strong 45 8
  Pseudomonas sp. DMC3 GFF698 Chromosome partition protein Smc insig. 28 15
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4082 Chromosome partition protein smc insig. 28 15
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3855 Chromosome partition protein smc insig. 28 15
  Pseudomonas fluorescens FW300-N2E3 AO353_00720 chromosome segregation protein SMC sig. 28 15
  Synechocystis sp000284455 PCC 6803 SGL_RS00385 AAA family ATPase cofit 24 23
  Pseudomonas fluorescens FW300-N2C3 AO356_02550 chromosome segregation protein SMC insig. 28 15
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07655 chromosome segregation protein SMC insig. 47 8
  Bifidobacterium breve UCC2003 BBR_RS10265 DNA replication and repair protein RecF strong 36 9
  Shewanella sp. ANA-3 Shewana3_1567 chromosome segregation protein SMC (RefSeq) insig. 32 13
  Shewanella oneidensis MR-1 SO2898 SMC family protein (NCBI ptt file) strong 32 13