Homologs of ABZR86_RS09080 from Dyella japonica UNC79MFTsu3.2

sigma-70 family RNA polymerase sigma factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09080 sigma-70 family RNA polymerase sigma factor cofit 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS14380 sigma-70 family RNA polymerase sigma factor insig. 68 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS14665 sigma-70 family RNA polymerase sigma factor insig. 68 100
o Rhodanobacter sp. FW510-T8 OKGIIK_03490 hypothetical protein insig. 68 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS13930 RNA polymerase sigma factor insig. 74 86
o Erwinia amylovora T8 OLJFJH_08545 RNA polymerase subunit sigma-70 insig. 45 83
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13745 sigma-70 family RNA polymerase sigma factor insig. 46 83
o Pantoea sp. MT58 IAI47_20240 sigma-70 family RNA polymerase sigma factor insig. 44 81
o Herbaspirillum seropedicae SmR1 HSERO_RS16195 RNA polymerase sigma factor insig. 38 89
  Rhizobium sp. OAE497 ABIE40_RS01010 sigma-70 family RNA polymerase sigma factor insig. 39 78
  Rhodopseudomonas palustris CGA009 TX73_009325 sigma-70 family RNA polymerase sigma factor insig. 37 76
  Acidovorax sp. GW101-3H11 Ac3H11_1827 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 91
  Sinorhizobium meliloti 1021 SM_b20531 RNA polymerase sigma factor insig. 36 77
o Paraburkholderia sabiae LMG 24235 QEN71_RS20845 sigma-70 family RNA polymerase sigma factor insig. 37 83
o Burkholderia phytofirmans PsJN BPHYT_RS25505 RNA polymerase sigma factor insig. 36 81
  Pseudomonas putida KT2440 PP_0994 putative RNA polymerase sigma factor insig. 40 80
  Bosea sp. OAE506 ABIE41_RS02435 sigma-70 family RNA polymerase sigma factor insig. 40 77
  Burkholderia phytofirmans PsJN BPHYT_RS25560 RNA polymerase sigma factor insig. 33 83
  Agrobacterium fabrum C58 Atu2268 ECF family sigma factor insig. 36 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3636 RNA polymerase sigma factor, sigma-70 family insig. 37 79
  Sphingobium sp. HT1-2 GFF5259 hypothetical protein insig. 39 63
  Variovorax sp. OAS795 ABID97_RS16825 sigma-70 family RNA polymerase sigma factor insig. 38 76
  Dechlorosoma suillum PS Dsui_0155 RNA polymerase sigma factor, sigma-70 family strong 37 77
  Pseudomonas stutzeri RCH2 Psest_0114 RNA polymerase sigma factor, sigma-70 family insig. 35 76
o Xanthobacter sp. DMC5 GFF2972 ECF RNA polymerase sigma factor SigF no data 34 80
  Caulobacter crescentus NA1000 CCNA_03362 ECF-family RNA polymerase sigma factor strong 41 75
  Caulobacter crescentus NA1000 Δfur CCNA_03362 ECF-family RNA polymerase sigma factor cofit 41 75
  Variovorax sp. SCN45 GFF320 RNA polymerase ECF-type sigma factor insig. 36 75
  Azospirillum sp. SherDot2 MPMX19_04570 ECF RNA polymerase sigma factor SigF insig. 37 76
  Xanthobacter sp. DMC5 GFF1206 ECF RNA polymerase sigma factor SigF insig. 37 77
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01090 sigma-70 family RNA polymerase sigma factor insig. 34 75
  Rhizobium sp. OAE497 ABIE40_RS19610 sigma-70 family RNA polymerase sigma factor insig. 34 76
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 33 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01786 RNA polymerase sigma-70 factor, ECF subfamily insig. 36 64
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 32 74
  Azospirillum sp. SherDot2 MPMX19_05742 hypothetical protein insig. 34 59
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 31 75
  Caulobacter crescentus NA1000 CCNA_00685 RNA polymerase sigma factor sig. 29 77
  Caulobacter crescentus NA1000 Δfur CCNA_00685 RNA polymerase sigma factor cofit 29 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 31 75
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 78
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 30 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 28 79
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 31 76
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 29 76
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 32 75
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04205 sigma-70 family RNA polymerase sigma factor insig. 30 72
  Rhodanobacter denitrificans MT42 LRK55_RS11045 sigma-70 family RNA polymerase sigma factor insig. 29 72
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11315 sigma-70 family RNA polymerase sigma factor insig. 29 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4220 RNA polymerase sigma factor RpoE insig. 29 77
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 30 77
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 28 72
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 26 77
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 32 75
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16105 sigma-70 family RNA polymerase sigma factor insig. 28 62
  Xanthobacter sp. DMC5 GFF3078 ECF RNA polymerase sigma factor RpoE insig. 30 72
  Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 33 61
  Bosea sp. OAE506 ABIE41_RS10280 sigma-70 family RNA polymerase sigma factor insig. 29 76
  Bacteroides thetaiotaomicron VPI-5482 BT4571 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 25 77
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 28 77
  Rhodanobacter denitrificans MT42 LRK55_RS09165 RNA polymerase sigma factor insig. 31 74
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09505 RNA polymerase sigma factor insig. 31 74
  Rhodanobacter sp. FW510-T8 OKGIIK_14520 rpoE RNA polymerase sigma factor insig. 31 74
  Cupriavidus basilensis FW507-4G11 RR42_RS35625 RNA polymerase sigma24 factor insig. 29 81
  Variovorax sp. SCN45 GFF4558 RNA polymerase ECF-type sigma factor insig. 31 82
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 28 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 28 77
  Cellulophaga baltica 18 M666_RS18230 RNA polymerase sigma factor insig. 24 78
  Variovorax sp. SCN45 GFF3817 RNA polymerase sigma factor insig. 36 60
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 32 75
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 32 75
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 31 74
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 27 67
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10060 sigma-70 family RNA polymerase sigma factor insig. 31 74
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma cofit 29 76
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 27 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07350 sigma-70 family RNA polymerase sigma factor insig. 25 61
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 27 85
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 34 60
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 27 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 25 79
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08045 sigma-70 family RNA polymerase sigma factor cofit 30 78
  Shewanella loihica PV-4 Shew_1476 RNA polymerase sigma factor (RefSeq) insig. 26 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 24 75
  Lysobacter sp. OAE881 ABIE51_RS18540 sigma-70 family RNA polymerase sigma factor insig. 27 74
  Agrobacterium fabrum C58 Atu3084 RNA polymerase sigma factor insig. 31 81
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 26 84
  Alteromonas macleodii MIT1002 MIT1002_03202 Sigma-K factor insig. 25 74
  Ralstonia solanacearum PSI07 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor insig. 33 62
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 32 66
  Bacteroides ovatus ATCC 8483 BACOVA_05461 Sigma-70 region 2 cofit 29 77
  Pantoea sp. MT58 IAI47_19735 sigma-70 family RNA polymerase sigma factor insig. 31 78
  Mycobacterium tuberculosis H37Rv Rv3414c Probable alternative RNA polymerase sigma-D factor SigD sig. 30 79
  Bacteroides stercoris CC31F HMPREF1181_RS11830 sigma-70 family RNA polymerase sigma factor insig. 28 69
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 28 74
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 26 61
  Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 30 71
  Azospirillum sp. SherDot2 MPMX19_05229 ECF RNA polymerase sigma factor RpoE insig. 28 83
  Bifidobacterium breve UCC2003 BBR_RS16820 RNA polymerase sigma factor RpoE strong 26 75
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04080 RNA polymerase sigma-70 factor insig. 24 78