Homologs of A4249_RS07850 from Brevundimonas sp. GW460-12-10-14-LB2

pseudouridine synthase
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase F

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 100 100
o Caulobacter crescentus NA1000 CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 64 97
o Caulobacter crescentus NA1000 Δfur CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 64 97
  Paraburkholderia graminis OAS925 ABIE53_002509 23S rRNA pseudouridine2604 synthase insig. 49 90
o Castellaniella sp019104865 MT123 ABCV34_RS03070 pseudouridine synthase insig. 46 91
  Dechlorosoma suillum PS Dsui_2759 pseudouridine synthase family protein insig. 50 90
o Variovorax sp. OAS795 ABID97_RS00980 pseudouridine synthase strong 44 91
o Burkholderia phytofirmans PsJN BPHYT_RS12155 RNA-binding protein S4 insig. 48 90
o Variovorax sp. SCN45 GFF3530 Pseudouridine synthase insig. 44 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00606 23S rRNA pseudouridine2604 synthase insig. 48 88
o Herbaspirillum seropedicae SmR1 HSERO_RS10860 RNA pseudouridylate synthase insig. 48 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS11810 pseudouridine synthase insig. 47 88
  Ralstonia solanacearum PSI07 RPSI07_RS17115 16S rRNA uridine-516 pseudouridylate synthase cofit 47 88
  Cupriavidus basilensis FW507-4G11 RR42_RS11890 16S rRNA pseudouridylate synthase insig. 47 88
  Acidovorax sp. GW101-3H11 Ac3H11_4641 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 42 94
  Ralstonia solanacearum GMI1000 RS_RS07030 16S rRNA uridine-516 pseudouridylate synthase sig. 47 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00360 16S rRNA pseudouridylate synthase insig. 47 88
  Ralstonia solanacearum UW163 UW163_RS13690 16S rRNA pseudouridylate synthase insig. 47 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF343 tRNA pseudouridine synthase A (EC 4.2.1.70) cofit 45 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS06405 pseudouridine synthase cofit 48 90
o Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 40 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 34 93
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1010 pseudouridine synthase insig. 34 92
o Alteromonas macleodii MIT1002 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F insig. 34 93
o Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 34 92
  Escherichia coli BL21 ECD_03894 23S rRNA pseudouridine(2604) synthase cofit 37 91
  Escherichia coli BW25113 b4022 yjbC 23S rRNA pseudouridine synthase (NCBI) sig. 37 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25065 pseudouridylate synthase no data 32 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18660 pseudouridine synthase no data 33 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 34 92
o Escherichia coli ECOR27 NOLOHH_05365 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 36 91
o Escherichia coli ECOR38 HEPCGN_11820 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 36 91
o Escherichia coli ECRC101 OKFHMN_13190 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 36 91
o Escherichia coli ECRC101 MCAODC_03690 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 36 91
o Escherichia coli ECRC102 NIAGMN_10940 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 36 91
o Escherichia coli ECRC62 BNILDI_06155 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 36 91
o Escherichia coli ECRC98 JDDGAC_16815 rluF 23S rRNA pseudouridine(2604) synthase RluF no data 36 91
o Escherichia coli ECRC99 KEDOAH_14970 rluF 23S rRNA pseudouridine(2604) synthase RluF no data 36 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04027 23S rRNA pseudouridine(2604) synthase insig. 36 91
o Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 34 90
o Rhodanobacter denitrificans MT42 LRK55_RS06765 pseudouridine synthase insig. 35 90
o Escherichia fergusonii Becca EFB2_04580 Dual-specificity RNA pseudouridine synthase RluF insig. 36 91
o Escherichia coli Nissle 1917 ECOLIN_RS23225 23S rRNA pseudouridine(2604) synthase RluF insig. 36 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS07025 pseudouridine synthase insig. 35 90
  Marinobacter adhaerens HP15 HP15_886 pseudouridine synthase family 1 protein insig. 34 95
o Klebsiella michiganensis M5al BWI76_RS01755 23S rRNA pseudouridine synthase F insig. 35 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 34 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19110 23S rRNA pseudouridine synthase F insig. 32 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1362 Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70) insig. 35 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1843.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 34 90
o Serratia liquefaciens MT49 IAI46_21130 23S rRNA pseudouridine(2604) synthase RluF insig. 34 92
  Enterobacter sp. TBS_079 MPMX20_00237 Dual-specificity RNA pseudouridine synthase RluF insig. 34 91
o Enterobacter asburiae PDN3 EX28DRAFT_4322 pseudouridine synthase insig. 34 91
  Serratia liquefaciens MT49 IAI46_19150 23S rRNA pseudouridine(2604) synthase RluF insig. 32 92
  Bacteroides stercoris CC31F HMPREF1181_RS07005 pseudouridine synthase no data 32 95
o Pseudomonas simiae WCS417 PS417_05870 RNA-binding protein S4 insig. 32 91
o Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 33 90
o Erwinia tracheiphila SCR3 LU632_RS22175 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 33 96
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 31 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 31 95
o Pantoea sp. MT58 IAI47_19435 23S rRNA pseudouridine(2604) synthase RluF insig. 33 91
o Pseudomonas syringae pv. syringae B728a Psyr_1390 RNA-binding S4 insig. 30 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1390 RNA-binding S4 insig. 30 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11165 pseudouridine synthase no data 30 92
  Variovorax sp. SCN45 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) insig. 37 88
  Lysobacter sp. OAE881 ABIE51_RS13020 rRNA pseudouridine synthase insig. 33 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS23115 pseudouridine synthase no data 34 96
  Rhodanobacter denitrificans MT42 LRK55_RS15640 rRNA pseudouridine synthase cofit 33 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15885 rRNA pseudouridine synthase insig. 33 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17510 pseudouridylate synthase strong 32 93
  Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 37 89
o Pseudomonas fluorescens SBW25 PFLU_RS05940 RNA-binding protein S4 insig. 31 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05940 RNA-binding protein S4 insig. 31 91
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 35 90
  Paraburkholderia graminis OAS925 ABIE53_001827 23S rRNA pseudouridine2605 synthase no data 34 98
  Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 32 91
  Acidovorax sp. GW101-3H11 Ac3H11_1984 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 31 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05101 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) no data 34 96
  Rhodanobacter sp. FW510-T8 OKGIIK_04535 rsuA RNA-binding protein insig. 33 91
  Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 32 91
  Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 35 92
  Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 32 92
  Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 32 92
  Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 32 92
  Escherichia coli ECRC101 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 32 92
  Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 32 92
  Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 32 92
  Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 32 92
  Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 32 92
  Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 32 92
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 32 92
  Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 32 92
  Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 32 92
  Pantoea sp. MT58 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA sig. 32 92
o Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 32 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 30 91
  Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 32 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0245 pseudouridine synthase insig. 32 86
o Shewanella loihica PV-4 Shew_3180 pseudouridine synthase (RefSeq) insig. 35 90
  Caulobacter crescentus NA1000 CCNA_01915 ribosomal small subunit pseudouridine synthase A strong 35 88