Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella amazonensis SB2B | Sama_1501 | | LysR family transcriptional regulator (RefSeq) | insig. | 100 | 100 |
o | Shewanella loihica PV-4 | Shew_2387 | | LysR family transcriptional regulator (RefSeq) | sig. | 74 | 98 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_16940 | | LysR family transcriptional regulator | insig. | 61 | 98 |
| Pseudomonas putida KT2440 | PP_1637 | | Transcriptional regulator, LysR family | sig. | 39 | 90 |
| Pseudomonas sp. S08-1 | OH686_18820 | | Transcriptional regulator, LysR family | insig. | 38 | 90 |
| Pseudomonas stutzeri RCH2 | Psest_2863 | | Transcriptional regulator | strong | 39 | 90 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 39 | 90 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 39 | 90 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3152 | | LysR family transcriptional regulator PA3398 | sig. | 38 | 90 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_05630 | | LysR family transcriptional regulator | sig. | 37 | 90 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2984 | | LysR family transcriptional regulator PA3398 | strong | 37 | 90 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16845 | | LysR family transcriptional regulator | sig. | 38 | 90 |
| Pseudomonas sp. RS175 | PFR28_00480 | | HTH-type transcriptional activator CmpR | sig. | 37 | 90 |
| Pseudomonas simiae WCS417 | PS417_05850 | | LysR family transcriptional regulator | strong | 38 | 90 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05920 | | LysR family transcriptional regulator | insig. | 38 | 90 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05920 | | LysR family transcriptional regulator | sig. | 38 | 90 |
| Pectobacterium carotovorum WPP14 | HER17_RS12840 | | LysR family transcriptional regulator | cofit | 38 | 89 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS05920 | | LysR substrate-binding domain-containing protein | insig. | 38 | 89 |
| Dechlorosoma suillum PS | Dsui_2257 | | transcriptional regulator | cofit | 38 | 89 |
| Escherichia coli BL21 | ECD_02086 | | putative DNA-binding transcriptional regulator | insig. | 37 | 90 |
| Escherichia coli ECOR38 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 37 | 90 |
| Escherichia coli ECRC100 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 37 | 90 |
| Escherichia coli ECRC101 | MCAODC_14545 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 37 | 90 |
| Escherichia coli ECRC102 | NIAGMN_21260 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 37 | 90 |
| Escherichia coli ECRC62 | BNILDI_13990 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 37 | 90 |
| Escherichia coli ECRC98 | JDDGAC_27455 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 37 | 90 |
| Escherichia coli ECRC99 | KEDOAH_04690 | yieE | DNA-binding transcriptional regulator YeiE | no data | 37 | 90 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01554 | | HTH-type transcriptional regulator CysL | insig. | 37 | 90 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12630 | | DNA-binding transcriptional regulator YeiE | insig. | 37 | 90 |
| Escherichia coli BW25113 | b2157 | yeiE | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 37 | 90 |
| Enterobacter sp. TBS_079 | MPMX20_03128 | | HTH-type transcriptional activator CmpR | sig. | 36 | 88 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4660 | | LysR family transcriptional regulator PA3398 | insig. | 36 | 84 |
| Rahnella sp. WP5 | EX31_RS19050 | | LysR family transcriptional regulator | insig. | 37 | 89 |
| Ralstonia solanacearum GMI1000 | RS_RS05515 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0399 | | Transcriptional regulator | sig. | 36 | 88 |
| Klebsiella michiganensis M5al | BWI76_RS19690 | | LysR family transcriptional regulator | insig. | 37 | 90 |
| Dickeya dianthicola 67-19 | HGI48_RS09285 | | LysR family transcriptional regulator | insig. | 37 | 89 |
| Serratia liquefaciens MT49 | IAI46_17215 | | LysR family transcriptional regulator | insig. | 37 | 89 |
| Ralstonia solanacearum PSI07 | RPSI07_RS18655 | | LysR family transcriptional regulator | sig. | 36 | 93 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3777 | | LysR family transcriptional regulator YeiE | insig. | 37 | 90 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.979.1 | | LysR family transcriptional regulator YeiE | insig. | 33 | 99 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19780 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| Acinetobacter radioresistens SK82 | MPMX26_02541 | | HTH-type transcriptional regulator CysL | strong | 35 | 92 |
| Dickeya dianthicola ME23 | DZA65_RS09590 | | LysR family transcriptional regulator | insig. | 37 | 89 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14705 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| Ralstonia solanacearum UW163 | UW163_RS12175 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| Erwinia tracheiphila SCR3 | LU632_RS17295 | | LysR family transcriptional regulator | insig. | 38 | 88 |
| Dickeya dadantii 3937 | DDA3937_RS09260 | | LysR family transcriptional regulator | insig. | 36 | 89 |
| Pantoea sp. MT58 | IAI47_06680 | | LysR family transcriptional regulator | strong | 38 | 88 |
| Rhodanobacter denitrificans MT42 | LRK55_RS12535 | | LysR family transcriptional regulator | cofit | 36 | 88 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12835 | | LysR family transcriptional regulator | insig. | 36 | 88 |
o | Escherichia fergusonii Becca | EFB2_01699 | | HTH-type transcriptional regulator CysL | insig. | 38 | 82 |
o | Escherichia coli ECOR27 | NOLOHH_15070 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 38 | 82 |
| Dechlorosoma suillum PS | Dsui_2229 | | transcriptional regulator | cofit | 37 | 92 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3312 | | transcriptional regulator, LysR family | sig. | 33 | 92 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3312 | | transcriptional regulator, LysR family | insig. | 33 | 92 |
| Shewanella amazonensis SB2B | Sama_1882 | | LysR family transcriptional regulator (RefSeq) | sig. | 38 | 88 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_11795 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS21575 | | transcriptional regulator | insig. | 37 | 89 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_02230 | lysR | LysR family transcriptional regulator | insig. | 34 | 93 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS10365 | | LysR family transcriptional regulator | insig. | 34 | 90 |
| Variovorax sp. SCN45 | GFF3160 | | Transcriptional regulator YeiE, LysR family | insig. | 36 | 94 |
| Shewanella loihica PV-4 | Shew_2531 | | LysR family transcriptional regulator (RefSeq) | insig. | 33 | 94 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1478 | | regulatory protein, LysR:LysR, substrate-binding protein | insig. | 35 | 85 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1478 | | regulatory protein, LysR:LysR, substrate-binding protein | insig. | 35 | 85 |
| Pseudomonas fluorescens SBW25 | PFLU_RS09365 | | LysR family transcriptional regulator | insig. | 34 | 85 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS09365 | | LysR family transcriptional regulator | sig. | 34 | 85 |
o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04990 | | LysR family transcriptional regulator | insig. | 29 | 88 |
| Azospirillum sp. SherDot2 | MPMX19_00813 | | HTH-type transcriptional regulator CysL | insig. | 35 | 84 |
| Shewanella oneidensis MR-1 | SO2561 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 35 | 88 |
| Shewanella sp. ANA-3 | Shewana3_2367 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 88 |
o | Phocaeicola dorei CL03T12C01 | ABI39_RS18875 | | LysR family transcriptional regulator | insig. | 29 | 88 |
| Marinobacter adhaerens HP15 | HP15_2201 | | transcriptional regulator, LysR family | strong | 32 | 89 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS13965 | | LysR family transcriptional regulator | insig. | 34 | 91 |
o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS00720 | | LysR family transcriptional regulator | insig. | 30 | 89 |
o | Rhodopseudomonas palustris CGA009 | TX73_009100 | | LysR family transcriptional regulator | insig. | 36 | 84 |
o | Bacteroides ovatus ATCC 8483 | BACOVA_05396 | | LysR substrate binding domain protein | insig. | 29 | 88 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 28 | 96 |
| Agrobacterium fabrum C58 | Atu0672 | | transcriptional regulator, LysR family | insig. | 33 | 68 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_727 | | LysR family transcriptional regulator PA5437 | strong | 29 | 89 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2179 | | LysR family transcriptional regulator YbhD | insig. | 29 | 87 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_10035 | | LysR family transcriptional regulator | strong | 33 | 66 |
| Pseudomonas syringae pv. syringae B728a | Psyr_5062 | | transcriptional regulator, LysR family | strong | 28 | 93 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5062 | | transcriptional regulator, LysR family | sig. | 28 | 93 |
| Pseudomonas sp. RS175 | PFR28_04519 | | HTH-type transcriptional activator CmpR | strong | 29 | 89 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_12015 | | LysR family transcriptional regulator | strong | 29 | 89 |
o | Bacteroides stercoris CC31F | HMPREF1181_RS11950 | | LysR family transcriptional regulator | cofit | 27 | 87 |
| Pseudomonas fluorescens SBW25 | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 33 | 66 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 33 | 66 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2009 | | LysR family transcriptional regulator PA5437 | strong | 33 | 65 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4277 | | LysR family transcriptional regulator PA5437 | strong | 29 | 88 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS23130 | | LysR family transcriptional regulator | insig. | 28 | 94 |
o | Bacteroides thetaiotaomicron VPI-5482 | BT4599 | | putative transcriptional regulator (NCBI ptt file) | strong | 27 | 88 |
| Pseudomonas putida KT2440 | PP_5348 | | Transcriptional regulator, LysR family | strong | 31 | 67 |
| Rhodospirillum rubrum S1H | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | strong | 29 | 95 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1980 | rbcR | transcriptional regulator, LysR family | no data | 27 | 91 |
| Rhizobium sp. OAE497 | ABIE40_RS15535 | | LysR family transcriptional regulator | insig. | 34 | 68 |
| Pseudomonas simiae WCS417 | PS417_28220 | | LysR family transcriptional regulator | strong | 33 | 66 |
| Klebsiella michiganensis M5al | BWI76_RS20610 | | LysR family transcriptional regulator | insig. | 30 | 80 |
| Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 29 | 91 |