Homologs of Shew_3327 from Shewanella loihica PV-4

RNA-metabolising metallo-beta-lactamase (RefSeq)
SEED: Metallo-beta-lactamase family protein, RNA-specific
KEGG: metallo-beta-lactamase family protein

76 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_3327 RNA-metabolising metallo-beta-lactamase (RefSeq) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0537 aspartate kinase (RefSeq) insig. 74 100
o Shewanella oneidensis MR-1 SO0541 metallo-beta-lactamase family protein (NCBI ptt file) insig. 75 99
o Shewanella amazonensis SB2B Sama_0497 metallo-beta-lactamase family protein (RefSeq) insig. 68 99
o Alteromonas macleodii MIT1002 MIT1002_03270 Ribonuclease insig. 47 94
o Lysobacter sp. OAE881 ABIE51_RS06640 MBL fold metallo-hydrolase insig. 51 93
o Kangiella aquimarina DSM 16071 B158DRAFT_1606 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 45 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS14440 MBL fold metallo-hydrolase insig. 47 92
o Pseudomonas aeruginosa MRSN321 DY961_RS14910 MBL fold metallo-hydrolase insig. 45 92
o Pseudomonas aeruginosa PUPa3 DQ20_RS42220 MBL fold metallo-hydrolase insig. 45 92
o Pseudomonas aeruginosa PA14 IKLFDK_18450 MBL fold metallo-hydrolase strong 45 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS14170 MBL fold metallo-hydrolase insig. 45 94
o Rhodanobacter denitrificans MT42 LRK55_RS13890 MBL fold metallo-hydrolase insig. 45 94
o Pseudomonas stutzeri RCH2 Psest_2869 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 45 91
o Dechlorosoma suillum PS Dsui_1635 putative exonuclease of the beta-lactamase fold involved in RNA processing cofit 43 92
o Rhodanobacter sp. FW510-T8 OKGIIK_00845 ySH1 MBL fold metallo-hydrolase insig. 43 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14480 MBL fold metallo-hydrolase insig. 44 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS04385 MBL fold metallo-hydrolase insig. 42 93
o Desulfovibrio vulgaris Hildenborough JW710 DVU1530 metallo-beta-lactamase family protein (TIGR) insig. 40 92
o Desulfovibrio vulgaris Miyazaki F DvMF_0171 beta-lactamase domain protein (RefSeq) sig. 39 93
  Rhodanobacter denitrificans MT42 LRK55_RS13845 MBL fold metallo-hydrolase insig. 43 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14125 MBL fold metallo-hydrolase insig. 43 92
o Ralstonia solanacearum GMI1000 RS_RS00995 MBL fold metallo-hydrolase insig. 41 94
o Caulobacter crescentus NA1000 CCNA_00854 metallo-beta-lactamase protein insig. 40 95
o Caulobacter crescentus NA1000 Δfur CCNA_00854 metallo-beta-lactamase protein cofit 40 95
o Marinobacter adhaerens HP15 HP15_2406 metallo-beta-lactamase family protein insig. 42 93
o Azospirillum brasilense Sp245 AZOBR_RS07000 beta-lactamase insig. 38 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0356 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain insig. 40 91
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01315 MBL fold metallo-hydrolase RNA specificity domain-containing protein insig. 36 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS19990 MBL fold metallo-hydrolase insig. 39 94
o Pseudomonas fluorescens FW300-N2E3 AO353_19925 mRNA 3'-end processing factor insig. 39 98
o Azospirillum sp. SherDot2 MPMX19_05334 hypothetical protein insig. 37 98
o Cupriavidus basilensis FW507-4G11 RR42_RS09610 mRNA 3'-end processing factor insig. 39 93
o Pseudomonas sp. RS175 PFR28_02316 Ribonuclease insig. 39 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1519 Metallo-beta-lactamase family protein, RNA-specific insig. 39 97
o Pseudomonas putida KT2440 PP_3291 Metallo-beta-lactamase family protein insig. 38 92
o Pseudomonas fluorescens FW300-N2C3 AO356_23925 mRNA 3'-end processing factor insig. 38 97
o Rhodopseudomonas palustris CGA009 TX73_021505 MBL fold metallo-hydrolase insig. 38 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3226 Metallo-beta-lactamase family protein, RNA-specific insig. 38 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11070 MBL fold metallo-hydrolase insig. 38 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3165 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 37 92
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18635 MBL fold metallo-hydrolase insig. 35 95
o Burkholderia phytofirmans PsJN BPHYT_RS27805 RNA-metabolising metallo-beta-lactamase insig. 37 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3814 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 39 91
o Sphingobium sp. HT1-2 GFF4359 Metallo-beta-lactamase family protein, RNA-specific insig. 39 97
o Variovorax sp. SCN45 GFF6952 Metallo-beta-lactamase family protein, RNA-specific insig. 39 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05985 MBL fold hydrolase insig. 36 93
  Marinobacter adhaerens HP15 HP15_1324 metallo-beta-lactamase family protein insig. 40 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_21655 MBL fold hydrolase insig. 38 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20845 MBL fold hydrolase insig. 34 97
  Kangiella aquimarina DSM 16071 B158DRAFT_1678 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 38 93
o Castellaniella sp019104865 MT123 ABCV34_RS06000 MBL fold metallo-hydrolase insig. 37 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09240 MBL fold metallo-hydrolase insig. 35 97
o Sinorhizobium meliloti 1021 SMa1131 Metallo-beta-lactamase superfamily protein insig. 37 93
o Acidovorax sp. GW101-3H11 Ac3H11_1523 Metallo-beta-lactamase family protein, RNA-specific insig. 35 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01950 MBL fold metallo-hydrolase insig. 35 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_01365 MBL fold hydrolase cofit 37 92
  Sphingobium sp. HT1-2 GFF5006 Metallo-beta-lactamase family protein, RNA-specific cofit 36 92
  Cellulophaga baltica 18 M666_RS11770 MBL fold metallo-hydrolase insig. 34 97
  Marinobacter adhaerens HP15 HP15_2380 metallo-beta-lactamase family protein insig. 35 93
  Pseudomonas sp. BP01 JOY50_RS16110 MBL fold metallo-hydrolase RNA specificity domain-containing protein insig. 35 94
  Pseudomonas putida KT2440 PP_1775 Metallo-beta-lactamase family protein strong 35 92
  Pseudomonas syringae pv. syringae B728a Psyr_3639 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase insig. 32 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3639 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase insig. 32 90
  Pseudomonas stutzeri RCH2 Psest_1808 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain insig. 31 90
  Methanococcus maripaludis JJ MMJJ_RS01415 beta-CASP ribonuclease aCPSF1 sig. 29 90
  Methanococcus maripaludis S2 MMP_RS03635 beta-CASP ribonuclease aCPSF1 no data 29 90
  Methanococcus maripaludis JJ MMJJ_RS07240 MBL fold metallo-hydrolase strong 28 90
  Methanococcus maripaludis S2 MMP_RS07115 MBL fold metallo-hydrolase strong 28 90
  Methanococcus maripaludis JJ MMJJ_RS02985 MBL fold metallo-hydrolase strong 28 98
  Methanococcus maripaludis S2 MMP_RS02290 MBL fold metallo-hydrolase strong 28 98
  Sphingobium sp. HT1-2 GFF4757 Metallo-beta-lactamase family protein, RNA-specific no data 43 15
  Synechocystis sp000284455 PCC 6803 SGL_RS16630 MBL fold metallo-hydrolase strong 26 54
  Desulfovibrio vulgaris Miyazaki F DvMF_2926 beta-lactamase domain protein (RefSeq) strong 30 21
  Desulfovibrio vulgaris Hildenborough JW710 DVU0876 metallo-beta-lactamase family protein (TIGR) strong 28 21
  Agrobacterium fabrum C58 Atu5085 metallo-beta-lactamase insig. 28 42