Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella loihica PV-4 | Shew_0236 | | LysR family transcriptional regulator (RefSeq) | insig. | 100 | 100 |
| Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 34 | 90 |
| Shewanella amazonensis SB2B | Sama_3549 | | LyrR family transcriptional regulator (RefSeq) | insig. | 32 | 93 |
| Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 33 | 93 |
| Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 31 | 91 |
| Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 31 | 92 |
| Pseudomonas sp. S08-1 | OH686_07440 | | Transcriptional regulator, LysR family | insig. | 33 | 92 |
| Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 31 | 90 |
| Paraburkholderia graminis OAS925 | ABIE53_005764 | | DNA-binding transcriptional LysR family regulator | insig. | 29 | 92 |
| Klebsiella michiganensis M5al | BWI76_RS22630 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 32 | 91 |
| Variovorax sp. SCN45 | GFF698 | | Transcriptional regulator, LysR family | insig. | 32 | 91 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_0884 | | Transcriptional regulator | insig. | 34 | 93 |
| Serratia liquefaciens MT49 | IAI46_20610 | | LysR family transcriptional regulator | insig. | 30 | 94 |
| Variovorax sp. SCN45 | GFF7142 | | Transcriptional regulator, LysR family | insig. | 32 | 91 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Dickeya dianthicola ME23 | DZA65_RS14555 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Shewanella sp. ANA-3 | Shewana3_3930 | | LysR family transcriptional regulator (RefSeq) | cofit | 30 | 95 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 29 | 93 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 29 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 29 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06618 | | transcriptional regulator, LysR family | no data | 29 | 92 |
| Pseudomonas sp. S08-1 | OH686_04560 | | Transcriptional regulator, LysR family | cofit | 34 | 85 |
| Shewanella loihica PV-4 | Shew_0028 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 92 |
| Variovorax sp. OAS795 | ABID97_RS19260 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| Variovorax sp. SCN45 | GFF672 | | Transcriptional regulator, LysR family | insig. | 32 | 90 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08130 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4776 | | LysR-family transcriptional regulator STM2912 | insig. | 31 | 92 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_19025 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 30 | 92 |
| Rhodanobacter denitrificans MT42 | LRK55_RS07880 | | LysR family transcriptional regulator | cofit | 32 | 91 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_14945 | lysR | LysR family transcriptional regulator | insig. | 32 | 91 |
| Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 30 | 92 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4911 | | Transcriptional regulator, LysR family | insig. | 31 | 90 |
| Pseudomonas fluorescens SBW25 | PFLU_RS07950 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS07950 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS38915 | | LysR family transcriptional regulator | insig. | 34 | 90 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15410 | | LysR family transcriptional regulator | cofit | 32 | 91 |
| Shewanella oneidensis MR-1 | SO4524 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 29 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00056 | | transcriptional regulator, LysR family | no data | 32 | 85 |
| Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 28 | 95 |
| Pseudomonas putida KT2440 | PP_1164 | | Transcriptional regulator, LysR family | insig. | 31 | 93 |
| Pseudomonas sp. RS175 | PFR28_04672 | | HTH-type transcriptional regulator DmlR | insig. | 30 | 93 |
| Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_09735 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| Burkholderia phytofirmans PsJN | BPHYT_RS20365 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Dickeya dianthicola 67-19 | HGI48_RS01665 | | LysR family transcriptional regulator | insig. | 33 | 82 |
| Rahnella sp. WP5 | EX31_RS05400 | | LysR family transcriptional regulator | insig. | 30 | 91 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1749 | | Cyn operon transcriptional activator | insig. | 31 | 93 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 30 | 92 |
| Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 30 | 92 |
| Shewanella sp. ANA-3 | Shewana3_2722 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 91 |
| Variovorax sp. OAS795 | ABID97_RS28810 | | LysR substrate-binding domain-containing protein | insig. | 33 | 93 |
| Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 32 | 87 |
| Pectobacterium carotovorum WPP14 | HER17_RS02735 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| Ralstonia solanacearum GMI1000 | RS_RS22650 | | LysR family transcriptional regulator | insig. | 31 | 89 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5325 | | Transcriptional regulator, LysR family | insig. | 30 | 90 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS34230 | | LysR family transcriptional regulator | sig. | 30 | 93 |
| Rahnella sp. WP5 | EX31_RS12270 | | HTH-type transcriptional activator AaeR | insig. | 30 | 94 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23375 | | transcriptional regulator | insig. | 30 | 95 |
| Caulobacter crescentus NA1000 | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 30 | 89 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 30 | 89 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 29 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02245 | | transcriptional regulator, LysR family | strong | 29 | 93 |
| Paraburkholderia graminis OAS925 | ABIE53_000382 | | DNA-binding transcriptional LysR family regulator | strong | 29 | 93 |
| Pseudomonas putida KT2440 | PP_2534 | | Transcriptional regulator, LysR family | insig. | 31 | 92 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11890 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| Ralstonia solanacearum UW163 | UW163_RS01700 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| Agrobacterium fabrum C58 | Atu4591 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1805.1 | | Transcriptional regulator, LysR family | insig. | 30 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_05925 | | LysR family transcriptional regulator | strong | 29 | 94 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28465 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 28 | 90 |
| Pseudomonas sp. RS175 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | strong | 30 | 94 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| Pseudomonas simiae WCS417 | PS417_06325 | | LysR family transcriptional regulator | strong | 29 | 94 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 29 | 91 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 29 | 91 |
| Burkholderia phytofirmans PsJN | BPHYT_RS01435 | | LysR family transcriptional regulator | strong | 29 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS00135 | | LysR family transcriptional regulator | cofit | 29 | 93 |
| Pseudomonas stutzeri RCH2 | Psest_0879 | | Transcriptional regulator | cofit | 29 | 94 |
| Variovorax sp. OAS795 | ABID97_RS27305 | | LysR family transcriptional regulator | insig. | 30 | 94 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 29 | 94 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_23240 | | LysR family transcriptional regulator | insig. | 28 | 90 |
| Enterobacter sp. TBS_079 | MPMX20_03624 | | HTH-type transcriptional regulator DmlR | sig. | 30 | 90 |
| Rahnella sp. WP5 | EX31_RS04005 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| Serratia liquefaciens MT49 | IAI46_12425 | | LysR family transcriptional regulator | cofit | 29 | 92 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17770 | | LysR family transcriptional regulator | sig. | 32 | 92 |
| Ralstonia solanacearum UW163 | UW163_RS21370 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 30 | 90 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 30 | 90 |
| Ralstonia solanacearum GMI1000 | RS_RS02710 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 30 | 92 |
| Sinorhizobium meliloti 1021 | SMa1602 | | LysR family transcriptional regulator | insig. | 34 | 85 |
| Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 27 | 92 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 30 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16575 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| Pseudomonas sp. RS175 | PFR28_02027 | | HTH-type transcriptional regulator DmlR | insig. | 28 | 95 |
| Variovorax sp. SCN45 | GFF2326 | | Transcriptional regulator, LysR family | insig. | 32 | 90 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS11395 | | LysR family transcriptional regulator | insig. | 31 | 92 |