Homologs of Dshi_1119 from Dinoroseobacter shibae DFL-12

DNA damage response helicase, ligase-associated (from data)
Original annotation: DEAD/H associated domain protein (RefSeq)
SEED: FIG003033: Helicase domain protein
KEGG: ATP-dependent helicase Lhr and Lhr-like helicase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_1119 DNA damage response helicase, ligase-associated (from data) strong 100 100
o Phaeobacter inhibens DSM 17395 PGA1_c06040 DNA damage response helicase, ligase-associated (from data) sig. 72 98
o Azospirillum brasilense Sp245 AZOBR_RS09305 helicase insig. 53 100
o Azospirillum sp. SherDot2 MPMX19_01581 ATP-dependent RNA helicase DbpA insig. 54 93
o Sinorhizobium meliloti 1021 SMc02237 DNA damage response helicase, ligase-associated (from data) strong 49 99
o Rhizobium sp. OAE497 ABIE40_RS02475 ligase-associated DNA damage response DEXH box helicase insig. 48 99
o Agrobacterium fabrum C58 Atu0494 large atp-dependant helicase-related protein strong 50 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1941 DNA damage response helicase, ligase-associated (from data) strong 51 97
o Bosea sp. OAE506 ABIE41_RS24120 ligase-associated DNA damage response DEXH box helicase insig. 49 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11475 ligase-associated DNA damage response DEXH box helicase insig. 49 94
o Rhodopseudomonas palustris CGA009 TX73_004160 ligase-associated DNA damage response DEXH box helicase insig. 47 99
o Xanthobacter sp. DMC5 GFF1839 ATP-dependent RNA helicase SrmB insig. 49 98
o Caulobacter crescentus NA1000 CCNA_02121 ATP-dependent helicase strong 45 99
o Caulobacter crescentus NA1000 Δfur CCNA_02121 ATP-dependent helicase cofit 45 99
o Alteromonas macleodii MIT1002 MIT1002_03764 ATP-dependent helicase insig. 46 91
o Variovorax sp. SCN45 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity insig. 35 96
o Pseudomonas simiae WCS417 PS417_06390 DEAD/DEAH box helicase insig. 36 95
o Pseudomonas fluorescens SBW25 PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 36 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 36 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3657.1 FIG003033: Helicase domain protein insig. 37 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS21360 ligase-associated DNA damage response DEXH box helicase insig. 36 96
o Pseudomonas sp. S08-1 OH686_06065 DEXH box helicase, DNA ligase-associated insig. 36 95
o Herbaspirillum seropedicae SmR1 HSERO_RS11390 DEAD/DEAH box helicase insig. 36 95
o Pseudomonas syringae pv. syringae B728a Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 36 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 36 95
o Variovorax sp. OAS795 ABID97_RS00385 ligase-associated DNA damage response DEXH box helicase insig. 36 94
o Pseudomonas stutzeri RCH2 Psest_1647 Lhr-like helicases sig. 35 95
o Pseudomonas sp. RS175 PFR28_00502 hypothetical protein insig. 35 95
o Pseudomonas fluorescens FW300-N2C3 AO356_05520 DNA ligase-associated DEXH box helicase insig. 35 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2963 FIG003033: Helicase domain protein insig. 35 95
o Pseudomonas sp. DMC3 GFF2142 hypothetical protein insig. 34 95
o Pseudomonas putida KT2440 PP_1103 ATP-dependent helicase, DEAD box family insig. 34 96
o Burkholderia phytofirmans PsJN BPHYT_RS22150 DEAD/DEAH box helicase insig. 35 95
o Pseudomonas sp. BP01 JOY50_RS24050 ligase-associated DNA damage response DEXH box helicase insig. 35 96
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20800 ligase-associated DNA damage response DEXH box helicase insig. 33 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03145 ATP-dependent helicase Lhr and Lhr-like helicase insig. 35 95
o Paraburkholderia graminis OAS925 ABIE53_004154 ATP-dependent Lhr-like helicase insig. 34 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS30600 ligase-associated DNA damage response DEXH box helicase insig. 34 96
o Acidovorax sp. GW101-3H11 Ac3H11_4923 FIG003033: Helicase domain protein insig. 34 92
o Cellulophaga baltica 18 M666_RS06760 ligase-associated DNA damage response DEXH box helicase insig. 30 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09090 DNA ligase-associated DEXH box helicase strong 30 91
o Methanococcus maripaludis S2 MMP_RS05890 ATP-dependent helicase insig. 30 94
o Methanococcus maripaludis JJ MMJJ_RS08465 ATP-dependent helicase insig. 30 94
  Pantoea sp. MT58 IAI47_18890 ATP-dependent helicase insig. 32 94
  Pseudomonas sp. DMC3 GFF3810 ATP-dependent RNA helicase SrmB insig. 35 74
  Rhodanobacter sp. FW510-T8 OKGIIK_14210 ATP-dependent DNA helicase insig. 36 73
  Burkholderia phytofirmans PsJN BPHYT_RS27095 ATP-dependent DNA helicase insig. 36 65
  Variovorax sp. SCN45 GFF1558 Uncharacterized ATP-dependent DNA helicase PA3272 insig. 38 65
  Pseudomonas aeruginosa PA14 IKLFDK_16755 ATP-dependent DNA helicase insig. 38 65
  Paraburkholderia graminis OAS925 ABIE53_005864 ATP-dependent Lhr-like helicase strong 37 65
  Pseudomonas stutzeri RCH2 Psest_2922 Lhr-like helicases insig. 38 66
  Pseudomonas fluorescens FW300-N2E3 AO353_06780 DNA repair helicase Lhr (from data) sig. 34 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS10885 DEAD/DEAH box helicase insig. 37 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02925 ATP dependent helicase, Lhr family insig. 35 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1299 Lhr-like helicases insig. 34 74
  Mycobacterium tuberculosis H37Rv Rv3296 Probable ATP-dependent helicase Lhr (large helicase-related protein) insig. 37 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2634 Lhr-like helicases insig. 33 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2235.1 Lhr-like helicases insig. 37 65
  Pseudomonas fluorescens SBW25 PFLU_RS26960 DEAD/DEAH box helicase insig. 34 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26960 DEAD/DEAH box helicase insig. 34 74
  Pseudomonas sp. SVBP6 COO64_RS16720 DEAD/DEAH box helicase insig. 34 73
  Pseudomonas sp. BP01 JOY50_RS14800 DEAD/DEAH box helicase insig. 34 73
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4905 Lhr-like helicases insig. 32 76
  Pseudomonas sp. RS175 PFR28_03962 ATP-dependent RNA helicase SrmB insig. 33 74
  Pseudomonas fluorescens FW300-N2C3 AO356_14865 ATP-dependent DNA helicase insig. 35 65
  Pseudomonas putida KT2440 PP_1061 putative ATP-dependent DNA helicase lhr insig. 34 73
  Escherichia coli BL21 ECD_01623 putative ATP-dependent helicase insig. 29 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02072 ATP-dependent RNA helicase SrmB insig. 29 93
  Escherichia coli BW25113 b1653 lhr predicted ATP-dependent helicase (NCBI) insig. 29 93
  Escherichia coli ECOR38 HEPCGN_05805 lhr ATP-dependent helicase insig. 29 96
  Escherichia coli ECRC100 OKFHMN_27420 lhr ATP-dependent helicase insig. 29 96
  Escherichia coli ECRC101 MCAODC_17990 lhr ATP-dependent helicase insig. 29 96
  Escherichia coli ECRC102 NIAGMN_00645 lhr ATP-dependent helicase insig. 29 96
  Escherichia coli ECRC99 KEDOAH_00690 lhr ATP-dependent helicase no data 29 96
  Escherichia coli ECRC98 JDDGAC_02010 lhr ATP-dependent helicase cofit 29 96
  Escherichia coli ECRC62 BNILDI_16730 lhr ATP-dependent helicase cofit 30 93
  Escherichia coli ECOR27 NOLOHH_17940 lhr ATP-dependent helicase insig. 29 93
  Rhodanobacter denitrificans MT42 LRK55_RS07400 DEAD/DEAH box helicase insig. 33 53
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07665 DEAD/DEAH box helicase insig. 33 53
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14645 DNA repair helicase Lhr (from data) cofit 37 39
  Paraburkholderia sabiae LMG 24235 QEN71_RS21550 DEAD/DEAH box helicase insig. 34 52
  Klebsiella michiganensis M5al BWI76_RS21605 ATP-dependent helicase insig. 30 54
  Pseudomonas stutzeri RCH2 Psest_0914 Lhr-like helicases insig. 35 42
  Pseudomonas fluorescens FW300-N2E3 AO353_24235 DEAD/DEAH box helicase insig. 33 49
  Pseudomonas aeruginosa PA14 IKLFDK_13730 DEAD/DEAH box helicase insig. 32 52
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 41 23
  Rhodanobacter denitrificans MT42 LRK55_RS07400 DEAD/DEAH box helicase insig. 46 22
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07665 DEAD/DEAH box helicase insig. 47 20
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14645 DNA repair helicase Lhr (from data) cofit 45 20
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 27 40
  Desulfovibrio vulgaris Hildenborough JW710 DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) insig. 32 40
  Methanococcus maripaludis S2 MMP_RS02620 DEAD/DEAH box helicase insig. 27 42
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.67.1 ATP-dependent RNA helicase insig. 28 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03955 DEAD/DEAH box helicase cofit 27 44
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17215 DEAD/DEAH box helicase cofit 28 39
  Lysobacter sp. OAE881 ABIE51_RS14440 DEAD/DEAH box helicase insig. 27 51
  Phocaeicola dorei CL03T12C01 ABI39_RS13215 ATP-dependent DNA helicase RecQ cofit 28 38
  Pseudomonas stutzeri RCH2 Psest_3985 ATP-dependent DNA helicase, RecQ family insig. 27 45
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14945 helicase insig. 25 38
  Bacteroides stercoris CC31F HMPREF1181_RS00685 DEAD/DEAH box helicase strong 27 38